RNA–Protein interactions for RNA: ENST00000292314.6

CCDC12-201, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5 BASIC

Gene CCDC12, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-201ENST00000292314 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.9
CCDC12-201ENST00000292314 BCAR3O75815 825 aa20.69■□□□□ 0.9
CCDC12-201ENST00000292314 MS4A1P11836 297 aa20.69■□□□□ 0.9
CCDC12-201ENST00000292314 ATP6V1AP38606 617 aa20.69■□□□□ 0.9
CCDC12-201ENST00000292314 BRPF1P55201 1214 aaPredicted RBP20.69■□□□□ 0.9
CCDC12-201ENST00000292314 RRP1P56182 461 aaKnown RBP20.69■□□□□ 0.9
CCDC12-201ENST00000292314 FRAT1Q92837 279 aaPredicted RBP20.69■□□□□ 0.9
CCDC12-201ENST00000292314 CICQ96RK0 1608 aaPredicted RBP20.68■□□□□ 0.9
CCDC12-201ENST00000292314 SLC4A2P04920 1241 aa20.68■□□□□ 0.9
CCDC12-201ENST00000292314 TCERG1O14776 1098 aaKnown RBP20.67■□□□□ 0.9
CCDC12-201ENST00000292314 SF3B2Q13435 895 aaKnown RBP20.67■□□□□ 0.9
CCDC12-201ENST00000292314 NPM2Q86SE8 214 aaKnown RBP20.67■□□□□ 0.9
CCDC12-201ENST00000292314 MRPL50Q8N5N7 158 aaKnown RBP20.67■□□□□ 0.9
CCDC12-201ENST00000292314 HYPKQ9NX55 129 aa20.67■□□□□ 0.9
CCDC12-201ENST00000292314 ZKSCAN2Q63HK3 967 aa20.66■□□□□ 0.9
CCDC12-201ENST00000292314 DNAJC10Q8IXB1 793 aa20.66■□□□□ 0.9
CCDC12-201ENST00000292314 DDX21Q9NR30 783 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCDC12-201ENST00000292314 CHPF2Q9P2E5 772 aa20.66■□□□□ 0.9
CCDC12-201ENST00000292314 USP16Q9Y5T5 823 aa20.66■□□□□ 0.9
CCDC12-201ENST00000292314 LY75O60449 1722 aa20.66■□□□□ 0.9
CCDC12-201ENST00000292314 TJP1Q07157 1748 aa20.66■□□□□ 0.9
CCDC12-201ENST00000292314 PTPRCP08575 1304 aa20.65■□□□□ 0.9
CCDC12-201ENST00000292314 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
CCDC12-201ENST00000292314 CCNL1Q9UK58 526 aaPredicted RBP20.65■□□□□ 0.9
CCDC12-201ENST00000292314 RNF123Q5XPI4 1314 aa20.64■□□□□ 0.89
CCDC12-201ENST00000292314 APBA3O96018 575 aa20.64■□□□□ 0.89
CCDC12-201ENST00000292314 SLC27A3Q5K4L6 730 aa20.64■□□□□ 0.89
CCDC12-201ENST00000292314 PTF1AQ7RTS3 328 aa20.64■□□□□ 0.89
CCDC12-201ENST00000292314 FTSJ3Q8IY81 847 aaKnown RBP20.64■□□□□ 0.89
CCDC12-201ENST00000292314 ARHGAP45Q92619 1136 aa20.64■□□□□ 0.89
CCDC12-201ENST00000292314 API5Q9BZZ5 524 aaKnown RBP20.64■□□□□ 0.89
CCDC12-201ENST00000292314 NOB1Q9ULX3 412 aaKnown RBP20.63■□□□□ 0.89
CCDC12-201ENST00000292314 DDX58O95786 925 aaKnown RBP20.62■□□□□ 0.89
CCDC12-201ENST00000292314 FLIIQ13045 1269 aa20.62■□□□□ 0.89
CCDC12-201ENST00000292314 ATF7IPQ6VMQ6 1270 aa20.62■□□□□ 0.89
CCDC12-201ENST00000292314 TNS1Q9HBL0 1735 aaKnown RBP20.61■□□□□ 0.89
CCDC12-201ENST00000292314 CYP19A1P11511 503 aaPredicted RBP20.61■□□□□ 0.89
CCDC12-201ENST00000292314 MYL6BP14649 208 aa20.61■□□□□ 0.89
CCDC12-201ENST00000292314 FKBP5Q13451 457 aaPredicted RBP20.61■□□□□ 0.89
CCDC12-201ENST00000292314 SLC4A9Q96Q91 983 aa20.61■□□□□ 0.89
CCDC12-201ENST00000292314 CCDC87Q9NVE4 849 aa20.61■□□□□ 0.89
CCDC12-201ENST00000292314 RGPD3A6NKT7 1758 aaPredicted RBP20.61■□□□□ 0.89
CCDC12-201ENST00000292314 RGPD4Q7Z3J3 1758 aa20.61■□□□□ 0.89
CCDC12-201ENST00000292314 PLSCR1O15162 318 aa20.6■□□□□ 0.89
CCDC12-201ENST00000292314 ILDR2Q71H61 639 aa20.6■□□□□ 0.89
CCDC12-201ENST00000292314 COL5A3P25940 1745 aaPredicted RBP20.59■□□□□ 0.89
CCDC12-201ENST00000292314 PLIN1O60240 522 aa20.59■□□□□ 0.89
CCDC12-201ENST00000292314 A1BGP04217 495 aa20.59■□□□□ 0.89
CCDC12-201ENST00000292314 PDE3AQ14432 1141 aa20.59■□□□□ 0.89
CCDC12-201ENST00000292314 CNTNAP4Q9C0A0 1308 aa20.58■□□□□ 0.89
CCDC12-201ENST00000292314 CRKLP46109 303 aaKnown RBP20.58■□□□□ 0.89
CCDC12-201ENST00000292314 BAG6P46379 1132 aa20.58■□□□□ 0.89
CCDC12-201ENST00000292314 ITPK1Q13572 414 aa20.58■□□□□ 0.89
CCDC12-201ENST00000292314 DZIP1LQ8IYY4 767 aaKnown RBP20.58■□□□□ 0.89
CCDC12-201ENST00000292314 SOCS7O14512 581 aa20.57■□□□□ 0.88
CCDC12-201ENST00000292314 CCDC125Q86Z20 511 aa20.57■□□□□ 0.88
CCDC12-201ENST00000292314 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
CCDC12-201ENST00000292314 TAF1LQ8IZX4 1826 aa20.56■□□□□ 0.88
CCDC12-201ENST00000292314 ANXA1P04083 346 aa20.56■□□□□ 0.88
CCDC12-201ENST00000292314 TRIM27P14373 513 aa20.56■□□□□ 0.88
CCDC12-201ENST00000292314 IL6STP40189 918 aaPredicted RBP20.56■□□□□ 0.88
CCDC12-201ENST00000292314 AIMP1Q12904 312 aaKnown RBP20.56■□□□□ 0.88
CCDC12-201ENST00000292314 PDIA6Q15084 440 aa20.56■□□□□ 0.88
CCDC12-201ENST00000292314 PROSER3Q2NL68 480 aa20.56■□□□□ 0.88
CCDC12-201ENST00000292314 RC3H1Q5TC82 1133 aaKnown RBP20.56■□□□□ 0.88
CCDC12-201ENST00000292314 KIF6Q6ZMV9 814 aa20.56■□□□□ 0.88
CCDC12-201ENST00000292314 RREB1Q92766 1687 aa20.55■□□□□ 0.88
CCDC12-201ENST00000292314 TXNRD1Q16881 649 aa20.55■□□□□ 0.88
CCDC12-201ENST00000292314 G2E3Q7L622 706 aa20.55■□□□□ 0.88
CCDC12-201ENST00000292314 LINC00116Q8NCU8 138 aa20.55■□□□□ 0.88
CCDC12-201ENST00000292314 XAGE3Q8WTP9 111 aa20.55■□□□□ 0.88
CCDC12-201ENST00000292314 AK7Q96M32 723 aa20.55■□□□□ 0.88
CCDC12-201ENST00000292314 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
CCDC12-201ENST00000292314 A0A087WZG4 1122 aa20.54■□□□□ 0.88
CCDC12-201ENST00000292314 NBPF26B4DH59 902 aa20.54■□□□□ 0.88
CCDC12-201ENST00000292314 PIP4K2AP48426 406 aaPredicted RBP20.54■□□□□ 0.88
CCDC12-201ENST00000292314 NBPF14Q5TI25 921 aa20.54■□□□□ 0.88
CCDC12-201ENST00000292314 NBPF10Q6P3W6 841 aaKnown RBP20.54■□□□□ 0.88
CCDC12-201ENST00000292314 NBPF15Q8N660 670 aa20.54■□□□□ 0.88
CCDC12-201ENST00000292314 CLUAP1Q96AJ1 413 aa20.54■□□□□ 0.88
CCDC12-201ENST00000292314 CHMP4BQ9H444 224 aaKnown RBP20.54■□□□□ 0.88
CCDC12-201ENST00000292314 ZBTB1Q9Y2K1 713 aa20.54■□□□□ 0.88
CCDC12-201ENST00000292314 ZBTB22O15209 634 aa20.53■□□□□ 0.88
CCDC12-201ENST00000292314 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
CCDC12-201ENST00000292314 RIC3Q7Z5B4 369 aa20.53■□□□□ 0.88
CCDC12-201ENST00000292314 PXDNLA1KZ92 1463 aa20.53■□□□□ 0.88
CCDC12-201ENST00000292314 C4BP0C0L5 1744 aa20.53■□□□□ 0.88
CCDC12-201ENST00000292314 CCT4P50991 539 aaKnown RBP20.52■□□□□ 0.88
CCDC12-201ENST00000292314 NEXNQ0ZGT2 675 aa20.52■□□□□ 0.88
CCDC12-201ENST00000292314 INTS5Q6P9B9 1019 aaKnown RBP20.52■□□□□ 0.88
CCDC12-201ENST00000292314 KSR2Q6VAB6 950 aa20.52■□□□□ 0.88
CCDC12-201ENST00000292314 ARXQ96QS3 562 aa20.52■□□□□ 0.88
CCDC12-201ENST00000292314 ABCC4O15439 1325 aa20.52■□□□□ 0.87
CCDC12-201ENST00000292314 GNPATO15228 680 aa20.51■□□□□ 0.87
CCDC12-201ENST00000292314 KCNQ4P56696 695 aa20.51■□□□□ 0.87
CCDC12-201ENST00000292314 SLC4A10Q6U841 1118 aa20.51■□□□□ 0.87
CCDC12-201ENST00000292314 ANKRD13DQ6ZTN6 518 aa20.51■□□□□ 0.87
CCDC12-201ENST00000292314 ITPRIPQ8IWB1 547 aa20.51■□□□□ 0.87
CCDC12-201ENST00000292314 PLBD2Q8NHP8 589 aa20.51■□□□□ 0.87
CCDC12-201ENST00000292314 DNAAF4Q8WXU2 420 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms