RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 USPL1Q5W0Q7 1092 aa13.95□□□□□ -0.18
SNF8-201ENST00000290330 UBR2Q8IWV8 1755 aa13.95□□□□□ -0.18
SNF8-201ENST00000290330 COL15A1P39059 1388 aa13.95□□□□□ -0.18
SNF8-201ENST00000290330 A0A0G2JLW4 131 aa13.94□□□□□ -0.18
SNF8-201ENST00000290330 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
SNF8-201ENST00000290330 KCNQ3O43525 872 aa13.94□□□□□ -0.18
SNF8-201ENST00000290330 CANXP27824 592 aaKnown RBP13.94□□□□□ -0.18
SNF8-201ENST00000290330 MCM10Q7L590 875 aa13.94□□□□□ -0.18
SNF8-201ENST00000290330 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
SNF8-201ENST00000290330 TEX13AQ9BXU3 409 aaPredicted RBP13.94□□□□□ -0.18
SNF8-201ENST00000290330 NARFQ9UHQ1 456 aa13.94□□□□□ -0.18
SNF8-201ENST00000290330 HTATSF1O43719 755 aaKnown RBP13.93□□□□□ -0.18
SNF8-201ENST00000290330 EIF5P55010 431 aaKnown RBP13.93□□□□□ -0.18
SNF8-201ENST00000290330 FMNL2Q96PY5 1086 aa13.93□□□□□ -0.18
SNF8-201ENST00000290330 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
SNF8-201ENST00000290330 SIPA1L3O60292 1781 aaPredicted RBP13.92□□□□□ -0.18
SNF8-201ENST00000290330 POLRMTO00411 1230 aaKnown RBP13.92□□□□□ -0.18
SNF8-201ENST00000290330 DPEP1P16444 411 aa13.92□□□□□ -0.18
SNF8-201ENST00000290330 DCTN1Q14203 1278 aa13.92□□□□□ -0.18
SNF8-201ENST00000290330 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
SNF8-201ENST00000290330 KCNA3P22001 575 aa13.91□□□□□ -0.18
SNF8-201ENST00000290330 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
SNF8-201ENST00000290330 NFIXQ14938 502 aa13.91□□□□□ -0.18
SNF8-201ENST00000290330 RALBP1Q15311 655 aa13.91□□□□□ -0.18
SNF8-201ENST00000290330 PLEKHF1Q96S99 279 aa13.91□□□□□ -0.18
SNF8-201ENST00000290330 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
SNF8-201ENST00000290330 A0A087WZG4 1122 aa13.9□□□□□ -0.18
SNF8-201ENST00000290330 A1BGP04217 495 aa13.9□□□□□ -0.18
SNF8-201ENST00000290330 NEFMP07197 916 aa13.9□□□□□ -0.18
SNF8-201ENST00000290330 BCS1LQ9Y276 419 aa13.9□□□□□ -0.18
SNF8-201ENST00000290330 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
SNF8-201ENST00000290330 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
SNF8-201ENST00000290330 PRAMEF22A3QJZ6 481 aa13.88□□□□□ -0.19
SNF8-201ENST00000290330 SNRPA1P09661 255 aaKnown RBP13.88□□□□□ -0.19
SNF8-201ENST00000290330 TAF7Q15545 349 aaPredicted RBP13.88□□□□□ -0.19
SNF8-201ENST00000290330 PIM2Q9P1W9 311 aa13.88□□□□□ -0.19
SNF8-201ENST00000290330 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
SNF8-201ENST00000290330 ZNF330Q9Y3S2 320 aaPredicted RBP13.88□□□□□ -0.19
SNF8-201ENST00000290330 N4BP2Q86UW6 1770 aaPredicted RBP13.88□□□□□ -0.19
SNF8-201ENST00000290330 ADCY9O60503 1353 aa13.87□□□□□ -0.19
SNF8-201ENST00000290330 SERPINB2P05120 415 aa13.87□□□□□ -0.19
SNF8-201ENST00000290330 CHRNA5P30532 468 aa13.87□□□□□ -0.19
SNF8-201ENST00000290330 PNNQ9H307 717 aaKnown RBP13.87□□□□□ -0.19
SNF8-201ENST00000290330 ATP10DQ9P241 1426 aa13.87□□□□□ -0.19
SNF8-201ENST00000290330 NFE2L2Q16236 605 aa13.86□□□□□ -0.19
SNF8-201ENST00000290330 BICDL1Q6ZP65 573 aa13.86□□□□□ -0.19
SNF8-201ENST00000290330 MIS18AQ9NYP9 233 aa13.86□□□□□ -0.19
SNF8-201ENST00000290330 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
SNF8-201ENST00000290330 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
SNF8-201ENST00000290330 C1QTNF8P60827 252 aa13.85□□□□□ -0.19
SNF8-201ENST00000290330 TBC1D9BQ66K14 1250 aa13.85□□□□□ -0.19
SNF8-201ENST00000290330 ARHGAP27Q6ZUM4 889 aa13.85□□□□□ -0.19
SNF8-201ENST00000290330 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
SNF8-201ENST00000290330 MYBBP1AQ9BQG0 1328 aaKnown RBP13.85□□□□□ -0.19
SNF8-201ENST00000290330 MAPK8IP3Q9UPT6 1336 aa13.85□□□□□ -0.19
SNF8-201ENST00000290330 CAMTA2O94983 1202 aa13.84□□□□□ -0.19
SNF8-201ENST00000290330 DALRD3Q5D0E6 543 aaKnown RBP13.84□□□□□ -0.19
SNF8-201ENST00000290330 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
SNF8-201ENST00000290330 THUMPD2Q9BTF0 503 aaKnown RBP13.84□□□□□ -0.19
SNF8-201ENST00000290330 BRCA1P38398 1863 aaKnown RBP13.83□□□□□ -0.2
SNF8-201ENST00000290330 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
SNF8-201ENST00000290330 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
SNF8-201ENST00000290330 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.2
SNF8-201ENST00000290330 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
SNF8-201ENST00000290330 GPBP1L1Q9HC44 474 aaPredicted RBP13.83□□□□□ -0.2
SNF8-201ENST00000290330 NRXN2Q9P2S2 1712 aa13.83□□□□□ -0.2
SNF8-201ENST00000290330 ZNF526Q8TF50 670 aaPredicted RBP13.82□□□□□ -0.2
SNF8-201ENST00000290330 CARMIL3Q8ND23 1372 aa13.82□□□□□ -0.2
SNF8-201ENST00000290330 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
SNF8-201ENST00000290330 EIF4A1P60842 406 aaKnown RBP13.81□□□□□ -0.2
SNF8-201ENST00000290330 PRR5LQ6MZQ0 368 aa13.81□□□□□ -0.2
SNF8-201ENST00000290330 SETDB2Q96T68 719 aa13.81□□□□□ -0.2
SNF8-201ENST00000290330 SCN7AQ01118 1682 aa13.81□□□□□ -0.2
SNF8-201ENST00000290330 DLG5Q8TDM6 1919 aa13.8□□□□□ -0.2
SNF8-201ENST00000290330 RIPK4P57078 832 aa13.8□□□□□ -0.2
SNF8-201ENST00000290330 CLEC4GQ6UXB4 293 aa13.8□□□□□ -0.2
SNF8-201ENST00000290330 C2CD5Q86YS7 1000 aa13.8□□□□□ -0.2
SNF8-201ENST00000290330 BRIP1Q9BX63 1249 aa13.8□□□□□ -0.2
SNF8-201ENST00000290330 H0YIN7 160 aa13.79□□□□□ -0.2
SNF8-201ENST00000290330 TMPOP42166 694 aaKnown RBP13.79□□□□□ -0.2
SNF8-201ENST00000290330 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
SNF8-201ENST00000290330 PRKRIP1Q9H875 184 aaPredicted RBP13.79□□□□□ -0.2
SNF8-201ENST00000290330 ARFGEF1Q9Y6D6 1849 aa13.78□□□□□ -0.2
SNF8-201ENST00000290330 RGL2O15211 777 aa13.78□□□□□ -0.2
SNF8-201ENST00000290330 C9orf131Q5VYM1 1079 aa13.78□□□□□ -0.2
SNF8-201ENST00000290330 TTLL6Q8N841 843 aa13.78□□□□□ -0.2
SNF8-201ENST00000290330 CNBD1Q8NA66 436 aa13.78□□□□□ -0.2
SNF8-201ENST00000290330 ZNF652Q9Y2D9 606 aa13.78□□□□□ -0.2
SNF8-201ENST00000290330 PDE6BP35913 854 aa13.77□□□□□ -0.21
SNF8-201ENST00000290330 KDM3BQ7LBC6 1761 aa13.77□□□□□ -0.21
SNF8-201ENST00000290330 CCDC146Q8IYE0 955 aa13.77□□□□□ -0.21
SNF8-201ENST00000290330 PDZRN3Q9UPQ7 1066 aa13.77□□□□□ -0.21
SNF8-201ENST00000290330 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
SNF8-201ENST00000290330 KIF3CO14782 793 aa13.76□□□□□ -0.21
SNF8-201ENST00000290330 NPHP1O15259 732 aa13.76□□□□□ -0.21
SNF8-201ENST00000290330 LMOD3Q0VAK6 560 aa13.76□□□□□ -0.21
SNF8-201ENST00000290330 WDR43Q15061 677 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNF8-201ENST00000290330 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
SNF8-201ENST00000290330 ADAMTS8Q9UP79 889 aa13.76□□□□□ -0.21
SNF8-201ENST00000290330 RRP7AQ9Y3A4 280 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms