RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 BEND3Q5T5X7 828 aa12.7□□□□□ -0.38
C9orf43-201ENST00000288462 PI4KAP1Q8N8J0 262 aa12.7□□□□□ -0.38
C9orf43-201ENST00000288462 DDX21Q9NR30 783 aaKnown RBP eCLIP12.7□□□□□ -0.38
C9orf43-201ENST00000288462 TNS2Q63HR2 1409 aa12.69□□□□□ -0.38
C9orf43-201ENST00000288462 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
C9orf43-201ENST00000288462 ZNF496Q96IT1 587 aaPredicted RBP12.69□□□□□ -0.38
C9orf43-201ENST00000288462 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
C9orf43-201ENST00000288462 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
C9orf43-201ENST00000288462 LRP6O75581 1613 aa12.69□□□□□ -0.38
C9orf43-201ENST00000288462 CABP4P57796 275 aa12.68□□□□□ -0.38
C9orf43-201ENST00000288462 PDIA6Q15084 440 aa12.68□□□□□ -0.38
C9orf43-201ENST00000288462 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
C9orf43-201ENST00000288462 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
C9orf43-201ENST00000288462 UBTFL1P0CB47 393 aaPredicted RBP12.68□□□□□ -0.38
C9orf43-201ENST00000288462 KSR2Q6VAB6 950 aa12.68□□□□□ -0.38
C9orf43-201ENST00000288462 LRRFIP2Q9Y608 721 aaKnown RBP12.68□□□□□ -0.38
C9orf43-201ENST00000288462 EVA1CP58658 441 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 ATP8B2P98198 1209 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 TTC5Q8N0Z6 440 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 FMNL2Q96PY5 1086 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 ITGB4P16144 1822 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 ALDH1L1O75891 902 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 SNRPA1P09661 255 aaKnown RBP12.67□□□□□ -0.38
C9orf43-201ENST00000288462 PLEKHM2Q8IWE5 1019 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 TBC1D32Q96NH3 1257 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 BTG4Q9NY30 223 aa12.67□□□□□ -0.38
C9orf43-201ENST00000288462 NUP188Q5SRE5 1749 aa12.66□□□□□ -0.38
C9orf43-201ENST00000288462 LRP10Q7Z4F1 713 aa12.66□□□□□ -0.38
C9orf43-201ENST00000288462 UPF2Q9HAU5 1272 aaKnown RBP12.66□□□□□ -0.38
C9orf43-201ENST00000288462 MAP3K2Q9Y2U5 619 aa12.66□□□□□ -0.38
C9orf43-201ENST00000288462 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
C9orf43-201ENST00000288462 AFDNP55196 1824 aaKnown RBP12.66□□□□□ -0.38
C9orf43-201ENST00000288462 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
C9orf43-201ENST00000288462 SSH3Q8TE77 659 aa12.65□□□□□ -0.38
C9orf43-201ENST00000288462 ANP32EQ9BTT0 268 aa12.65□□□□□ -0.38
C9orf43-201ENST00000288462 DDX58O95786 925 aaKnown RBP12.65□□□□□ -0.38
C9orf43-201ENST00000288462 ERBB4Q15303 1308 aa12.64□□□□□ -0.39
C9orf43-201ENST00000288462 NBPF7P0C2Y1 421 aaPredicted RBP12.64□□□□□ -0.39
C9orf43-201ENST00000288462 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
C9orf43-201ENST00000288462 POLA2Q14181 598 aa12.64□□□□□ -0.39
C9orf43-201ENST00000288462 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
C9orf43-201ENST00000288462 LINS1Q8NG48 757 aa12.64□□□□□ -0.39
C9orf43-201ENST00000288462 UTYO14607 1347 aa12.63□□□□□ -0.39
C9orf43-201ENST00000288462 SALL3Q9BXA9 1300 aa12.63□□□□□ -0.39
C9orf43-201ENST00000288462 SMARCA5O60264 1052 aaPredicted RBP12.63□□□□□ -0.39
C9orf43-201ENST00000288462 OTUD7AQ8TE49 926 aaPredicted RBP12.63□□□□□ -0.39
C9orf43-201ENST00000288462 MTX1Q13505 466 aa12.62□□□□□ -0.39
C9orf43-201ENST00000288462 C16orf71Q8IYS4 520 aaPredicted RBP12.62□□□□□ -0.39
C9orf43-201ENST00000288462 EXOC6BQ9Y2D4 811 aa12.62□□□□□ -0.39
C9orf43-201ENST00000288462 USP16Q9Y5T5 823 aa12.62□□□□□ -0.39
C9orf43-201ENST00000288462 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
C9orf43-201ENST00000288462 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
C9orf43-201ENST00000288462 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
C9orf43-201ENST00000288462 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
C9orf43-201ENST00000288462 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.61□□□□□ -0.39
C9orf43-201ENST00000288462 PPP1R42Q7Z4L9 355 aa12.61□□□□□ -0.39
C9orf43-201ENST00000288462 LRRCC1Q9C099 1032 aa12.61□□□□□ -0.39
C9orf43-201ENST00000288462 APBB1O00213 710 aa12.61□□□□□ -0.39
C9orf43-201ENST00000288462 CDC45O75419 566 aa12.61□□□□□ -0.39
C9orf43-201ENST00000288462 MYL6BP14649 208 aa12.61□□□□□ -0.39
C9orf43-201ENST00000288462 MFAP1P55081 439 aaKnown RBP12.61□□□□□ -0.39
C9orf43-201ENST00000288462 CWF19L2Q2TBE0 894 aaKnown RBP12.61□□□□□ -0.39
C9orf43-201ENST00000288462 TBC1D9Q6ZT07 1266 aa12.61□□□□□ -0.39
C9orf43-201ENST00000288462 TJP1Q07157 1748 aa12.6□□□□□ -0.39
C9orf43-201ENST00000288462 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
C9orf43-201ENST00000288462 COPS6Q7L5N1 327 aa12.6□□□□□ -0.39
C9orf43-201ENST00000288462 USP35Q9P2H5 1018 aa12.6□□□□□ -0.39
C9orf43-201ENST00000288462 HDAC5Q9UQL6 1122 aa12.6□□□□□ -0.39
C9orf43-201ENST00000288462 GRM8O00222 908 aa12.59□□□□□ -0.39
C9orf43-201ENST00000288462 IGKV5-2P06315 115 aa12.59□□□□□ -0.39
C9orf43-201ENST00000288462 RIC3Q7Z5B4 369 aa12.59□□□□□ -0.39
C9orf43-201ENST00000288462 METTL22Q9BUU2 404 aaPredicted RBP12.59□□□□□ -0.39
C9orf43-201ENST00000288462 C22orf23Q9BZE7 217 aa12.59□□□□□ -0.39
C9orf43-201ENST00000288462 SRGAP3O43295 1099 aa12.59□□□□□ -0.39
C9orf43-201ENST00000288462 RAB11FIP3O75154 756 aa12.59□□□□□ -0.39
C9orf43-201ENST00000288462 C9orf78Q9NZ63 289 aaPredicted RBP12.59□□□□□ -0.39
C9orf43-201ENST00000288462 SLIT2O94813 1529 aa12.59□□□□□ -0.39
C9orf43-201ENST00000288462 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.4
C9orf43-201ENST00000288462 PDE1AP54750 535 aa12.58□□□□□ -0.4
C9orf43-201ENST00000288462 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
C9orf43-201ENST00000288462 COL15A1P39059 1388 aa12.58□□□□□ -0.4
C9orf43-201ENST00000288462 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
C9orf43-201ENST00000288462 RBM25P49756 843 aaKnown RBP12.58□□□□□ -0.4
C9orf43-201ENST00000288462 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.4
C9orf43-201ENST00000288462 NBPF14Q5TI25 921 aa12.58□□□□□ -0.4
C9orf43-201ENST00000288462 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
C9orf43-201ENST00000288462 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
C9orf43-201ENST00000288462 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
C9orf43-201ENST00000288462 AOX1Q06278 1338 aa12.57□□□□□ -0.4
C9orf43-201ENST00000288462 BCL9O00512 1426 aa12.57□□□□□ -0.4
C9orf43-201ENST00000288462 TOM1O60784 492 aa12.57□□□□□ -0.4
C9orf43-201ENST00000288462 KAZALD1Q96I82 304 aa12.57□□□□□ -0.4
C9orf43-201ENST00000288462 STAP2Q9UGK3 403 aa12.57□□□□□ -0.4
C9orf43-201ENST00000288462 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
C9orf43-201ENST00000288462 EIF5BO60841 1220 aaKnown RBP12.56□□□□□ -0.4
C9orf43-201ENST00000288462 SDSP20132 328 aa12.56□□□□□ -0.4
C9orf43-201ENST00000288462 MX1P20591 662 aa12.56□□□□□ -0.4
C9orf43-201ENST00000288462 PIP4K2AP48426 406 aaPredicted RBP12.56□□□□□ -0.4
C9orf43-201ENST00000288462 GCKRQ14397 625 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms