RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 AK2P54819 239 aa15.99■□□□□ 0.15
SCAF4-201ENST00000286835 EFCAB6Q5THR3 1501 aa15.99■□□□□ 0.15
SCAF4-201ENST00000286835 LETM1O95202 739 aaPredicted RBP15.99■□□□□ 0.15
SCAF4-201ENST00000286835 ZSCAN22P10073 491 aaPredicted RBP15.99■□□□□ 0.15
SCAF4-201ENST00000286835 ZNF771Q7L3S4 317 aaPredicted RBP15.99■□□□□ 0.15
SCAF4-201ENST00000286835 TULP4Q9NRJ4 1543 aa15.99■□□□□ 0.15
SCAF4-201ENST00000286835 FAM173BQ6P4H8 233 aa15.98■□□□□ 0.15
SCAF4-201ENST00000286835 PDCL2Q8N4E4 241 aa15.98■□□□□ 0.15
SCAF4-201ENST00000286835 BECN2A8MW95 431 aa15.98■□□□□ 0.15
SCAF4-201ENST00000286835 KCNA6P17658 529 aa15.98■□□□□ 0.15
SCAF4-201ENST00000286835 SYT1P21579 422 aa15.98■□□□□ 0.15
SCAF4-201ENST00000286835 TAF7Q15545 349 aaPredicted RBP15.98■□□□□ 0.15
SCAF4-201ENST00000286835 C16orf45Q96MC5 204 aaPredicted RBP15.98■□□□□ 0.15
SCAF4-201ENST00000286835 TNMDQ9H2S6 317 aa15.97■□□□□ 0.15
SCAF4-201ENST00000286835 IBTKQ9P2D0 1353 aaPredicted RBP15.97■□□□□ 0.15
SCAF4-201ENST00000286835 VIRMAQ69YN4 1812 aaKnown RBP15.97■□□□□ 0.15
SCAF4-201ENST00000286835 FAM135BQ49AJ0 1406 aa15.97■□□□□ 0.15
SCAF4-201ENST00000286835 PPFIA3O75145 1194 aa15.97■□□□□ 0.15
SCAF4-201ENST00000286835 UBE2HP62256 183 aa15.97■□□□□ 0.15
SCAF4-201ENST00000286835 ATP8B2P98198 1209 aa15.97■□□□□ 0.15
SCAF4-201ENST00000286835 PTCH1Q13635 1447 aa15.97■□□□□ 0.15
SCAF4-201ENST00000286835 TSPOAP1O95153 1857 aa15.97■□□□□ 0.15
SCAF4-201ENST00000286835 CYP2E1P05181 493 aaPredicted RBP15.97■□□□□ 0.15
SCAF4-201ENST00000286835 FSD1Q9BTV5 496 aa15.97■□□□□ 0.15
SCAF4-201ENST00000286835 KRT85P78386 507 aa15.96■□□□□ 0.15
SCAF4-201ENST00000286835 TPD52L1Q16890 204 aaPredicted RBP15.96■□□□□ 0.15
SCAF4-201ENST00000286835 RHPN1Q8TCX5 695 aa15.96■□□□□ 0.15
SCAF4-201ENST00000286835 NUP62CLQ9H1M0 184 aa15.96■□□□□ 0.15
SCAF4-201ENST00000286835 PHAXQ9H814 394 aaKnown RBP15.96■□□□□ 0.15
SCAF4-201ENST00000286835 TTC5Q8N0Z6 440 aa15.96■□□□□ 0.14
SCAF4-201ENST00000286835 CLEC17AQ6ZS10 378 aa15.95■□□□□ 0.14
SCAF4-201ENST00000286835 AACSQ86V21 672 aa15.95■□□□□ 0.14
SCAF4-201ENST00000286835 LRRC7Q96NW7 1537 aa15.95■□□□□ 0.14
SCAF4-201ENST00000286835 KIF1BPQ96EK5 621 aa15.95■□□□□ 0.14
SCAF4-201ENST00000286835 INTS4Q96HW7 963 aaKnown RBP15.95■□□□□ 0.14
SCAF4-201ENST00000286835 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
SCAF4-201ENST00000286835 ANAPC15P60006 121 aa15.95■□□□□ 0.14
SCAF4-201ENST00000286835 G3BP1Q13283 466 aaKnown RBP eCLIP15.95■□□□□ 0.142e-6■□□□□ 9.7
SCAF4-201ENST00000286835 DDX11Q96FC9 970 aa15.95■□□□□ 0.14
SCAF4-201ENST00000286835 PDLIM2Q96JY6 352 aa15.95■□□□□ 0.14
SCAF4-201ENST00000286835 SHPRHQ149N8 1683 aa15.94■□□□□ 0.14
SCAF4-201ENST00000286835 RAB11FIP3O75154 756 aa15.94■□□□□ 0.14
SCAF4-201ENST00000286835 F13A1P00488 732 aa15.94■□□□□ 0.14
SCAF4-201ENST00000286835 LTKP29376 864 aa15.94■□□□□ 0.14
SCAF4-201ENST00000286835 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
SCAF4-201ENST00000286835 GLI2P10070 1586 aa15.94■□□□□ 0.14
SCAF4-201ENST00000286835 MAP3K11Q16584 847 aa15.94■□□□□ 0.14
SCAF4-201ENST00000286835 SPATA32Q96LK8 384 aa15.94■□□□□ 0.14
SCAF4-201ENST00000286835 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
SCAF4-201ENST00000286835 TTC21BQ7Z4L5 1316 aa15.94■□□□□ 0.14
SCAF4-201ENST00000286835 CCDC8Q9H0W5 538 aaPredicted RBP15.94■□□□□ 0.14
SCAF4-201ENST00000286835 PI4KAP2A4QPH2 592 aa15.93■□□□□ 0.14
SCAF4-201ENST00000286835 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
SCAF4-201ENST00000286835 PI4KAP1Q8N8J0 262 aa15.93■□□□□ 0.14
SCAF4-201ENST00000286835 FILIP1Q7Z7B0 1213 aa15.93■□□□□ 0.14
SCAF4-201ENST00000286835 CHMP4AQ9BY43 222 aa15.93■□□□□ 0.14
SCAF4-201ENST00000286835 BOLA2Q9H3K6 86 aa15.93■□□□□ 0.14
SCAF4-201ENST00000286835 KDM4AO75164 1064 aa15.92■□□□□ 0.14
SCAF4-201ENST00000286835 ZNF530Q6P9A1 599 aaPredicted RBP15.92■□□□□ 0.14
SCAF4-201ENST00000286835 PTGS1P23219 599 aa15.92■□□□□ 0.14
SCAF4-201ENST00000286835 TERF1P54274 439 aa15.92■□□□□ 0.14
SCAF4-201ENST00000286835 LUZP1Q86V48 1076 aa15.92■□□□□ 0.14
SCAF4-201ENST00000286835 SNX14Q9Y5W7 946 aa15.92■□□□□ 0.14
SCAF4-201ENST00000286835 UVSSAQ2YD98 709 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 RNF20Q5VTR2 975 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.91■□□□□ 0.14
SCAF4-201ENST00000286835 PA2G4Q9UQ80 394 aaKnown RBP15.91■□□□□ 0.14
SCAF4-201ENST00000286835 PIP4K2BP78356 416 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 BLOC1S2Q6QNY1 142 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 CCDC186Q7Z3E2 898 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 PIBF1Q8WXW3 757 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 PRIMPOLQ96LW4 560 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 FMNL2Q96PY5 1086 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 MAP3K19Q56UN5 1328 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 PIK3R4Q99570 1358 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
SCAF4-201ENST00000286835 RASEFQ8IZ41 740 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 MYRIPQ8NFW9 859 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 PPRC1Q5VV67 1664 aaKnown RBP15.91■□□□□ 0.14
SCAF4-201ENST00000286835 PNPLA6Q8IY17 1366 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 CFAP74Q9C0B2 1584 aa15.91■□□□□ 0.14
SCAF4-201ENST00000286835 MLH3Q9UHC1 1453 aa15.9■□□□□ 0.14
SCAF4-201ENST00000286835 ADGRB3O60242 1522 aa15.9■□□□□ 0.14
SCAF4-201ENST00000286835 GLRX3O76003 335 aaKnown RBP15.9■□□□□ 0.14
SCAF4-201ENST00000286835 CCDC94Q9BW85 323 aaPredicted RBP15.9■□□□□ 0.14
SCAF4-201ENST00000286835 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
SCAF4-201ENST00000286835 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
SCAF4-201ENST00000286835 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
SCAF4-201ENST00000286835 EYA1Q99502 592 aa15.9■□□□□ 0.14
SCAF4-201ENST00000286835 MROH2AA6NES4 1674 aa15.9■□□□□ 0.14
SCAF4-201ENST00000286835 SF3A1Q15459 793 aaKnown RBP15.9■□□□□ 0.14
SCAF4-201ENST00000286835 TOM1L2Q6ZVM7 507 aa15.9■□□□□ 0.14
SCAF4-201ENST00000286835 DACT1Q9NYF0 836 aa15.89■□□□□ 0.13
SCAF4-201ENST00000286835 DNAJC2Q99543 621 aaKnown RBP15.89■□□□□ 0.13
SCAF4-201ENST00000286835 KIAA1210Q9ULL0 1709 aa15.89■□□□□ 0.13
SCAF4-201ENST00000286835 PDCP20941 246 aa15.89■□□□□ 0.13
SCAF4-201ENST00000286835 CCDC112Q8NEF3 446 aa15.89■□□□□ 0.13
SCAF4-201ENST00000286835 NBPF7P0C2Y1 421 aaPredicted RBP15.88■□□□□ 0.13
SCAF4-201ENST00000286835 PSMA5P28066 241 aa15.88■□□□□ 0.13
SCAF4-201ENST00000286835 CUL4AQ13619 759 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms