RNA–Protein interactions for RNA: ENST00000284551.10

TRIM11-201, Transcript of tripartite motif containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM11, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-201ENST00000284551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.32■□□□□ 0.84
TRIM11-201ENST00000284551 ADCY9O60503 1353 aa20.32■□□□□ 0.84
TRIM11-201ENST00000284551 ST18O60284 1047 aa20.32■□□□□ 0.84
TRIM11-201ENST00000284551 ZC3H6P61129 1189 aaKnown RBP20.32■□□□□ 0.84
TRIM11-201ENST00000284551 DNAAF4Q8WXU2 420 aa20.32■□□□□ 0.84
TRIM11-201ENST00000284551 DDX49Q9Y6V7 483 aaKnown RBP20.32■□□□□ 0.84
TRIM11-201ENST00000284551 NCLP19338 710 aaKnown RBP20.31■□□□□ 0.84
TRIM11-201ENST00000284551 FOXD4L6Q3SYB3 417 aaPredicted RBP20.31■□□□□ 0.84
TRIM11-201ENST00000284551 FOXD4L3Q6VB84 417 aaPredicted RBP20.31■□□□□ 0.84
TRIM11-201ENST00000284551 RHPN1Q8TCX5 695 aa20.31■□□□□ 0.84
TRIM11-201ENST00000284551 TMX3Q96JJ7 454 aa20.31■□□□□ 0.84
TRIM11-201ENST00000284551 PA2G4Q9UQ80 394 aaKnown RBP20.31■□□□□ 0.84
TRIM11-201ENST00000284551 ANKRD24Q8TF21 1146 aa20.31■□□□□ 0.84
TRIM11-201ENST00000284551 RNMTO43148 476 aaKnown RBP20.29■□□□□ 0.84
TRIM11-201ENST00000284551 MRE11P49959 708 aa20.29■□□□□ 0.84
TRIM11-201ENST00000284551 SLC39A6Q13433 755 aa20.29■□□□□ 0.84
TRIM11-201ENST00000284551 ARHGEF25Q86VW2 580 aa20.29■□□□□ 0.84
TRIM11-201ENST00000284551 RBM27Q9P2N5 1060 aaKnown RBP20.29■□□□□ 0.84
TRIM11-201ENST00000284551 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
TRIM11-201ENST00000284551 CACNA1FO60840 1977 aa20.29■□□□□ 0.84
TRIM11-201ENST00000284551 POLA2Q14181 598 aa20.29■□□□□ 0.84
TRIM11-201ENST00000284551 PI4K2BQ8TCG2 481 aa20.29■□□□□ 0.84
TRIM11-201ENST00000284551 STAP2Q9UGK3 403 aa20.29■□□□□ 0.84
TRIM11-201ENST00000284551 PIP4K2AP48426 406 aaPredicted RBP20.28■□□□□ 0.84
TRIM11-201ENST00000284551 AIMP1Q12904 312 aaKnown RBP20.28■□□□□ 0.84
TRIM11-201ENST00000284551 USP54Q70EL1 1684 aa20.28■□□□□ 0.84
TRIM11-201ENST00000284551 MAP3K2Q9Y2U5 619 aa20.28■□□□□ 0.84
TRIM11-201ENST00000284551 ADGRL3Q9HAR2 1447 aa20.28■□□□□ 0.84
TRIM11-201ENST00000284551 AKAP4Q5JQC9 854 aa20.28■□□□□ 0.84
TRIM11-201ENST00000284551 LMBRD1Q9NUN5 540 aa20.28■□□□□ 0.84
TRIM11-201ENST00000284551 PRPF40AO75400 957 aaKnown RBP20.27■□□□□ 0.84
TRIM11-201ENST00000284551 ADAMTSL3P82987 1691 aa20.27■□□□□ 0.84
TRIM11-201ENST00000284551 CAVIN1Q6NZI2 390 aaKnown RBP20.27■□□□□ 0.84
TRIM11-201ENST00000284551 MED1Q15648 1581 aaPredicted RBP20.26■□□□□ 0.83
TRIM11-201ENST00000284551 CPA1P15085 419 aa20.26■□□□□ 0.83
TRIM11-201ENST00000284551 PLEKHO1Q53GL0 409 aaPredicted RBP20.26■□□□□ 0.83
TRIM11-201ENST00000284551 ERBB4Q15303 1308 aa20.26■□□□□ 0.83
TRIM11-201ENST00000284551 KCNH5Q8NCM2 988 aa20.26■□□□□ 0.83
TRIM11-201ENST00000284551 JARID2Q92833 1246 aaPredicted RBP20.26■□□□□ 0.83
TRIM11-201ENST00000284551 BABAM1Q9NWV8 329 aa20.26■□□□□ 0.83
TRIM11-201ENST00000284551 KDM3BQ7LBC6 1761 aa20.25■□□□□ 0.83
TRIM11-201ENST00000284551 GIGYF1O75420 1035 aaPredicted RBP20.25■□□□□ 0.83
TRIM11-201ENST00000284551 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
TRIM11-201ENST00000284551 C1orf141Q5JVX7 400 aa20.25■□□□□ 0.83
TRIM11-201ENST00000284551 CLEC17AQ6ZS10 378 aa20.25■□□□□ 0.83
TRIM11-201ENST00000284551 GPT2Q8TD30 523 aa20.25■□□□□ 0.83
TRIM11-201ENST00000284551 DDX54Q8TDD1 881 aaKnown RBP20.25■□□□□ 0.83
TRIM11-201ENST00000284551 CABLES1Q8TDN4 633 aa20.25■□□□□ 0.83
TRIM11-201ENST00000284551 NUCB2P80303 420 aa20.24■□□□□ 0.83
TRIM11-201ENST00000284551 CWC27Q6UX04 472 aaKnown RBP20.24■□□□□ 0.83
TRIM11-201ENST00000284551 RGPD5Q99666 1765 aa20.24■□□□□ 0.83
TRIM11-201ENST00000284551 PXDNLA1KZ92 1463 aa20.23■□□□□ 0.83
TRIM11-201ENST00000284551 KRT28Q7Z3Y7 464 aa20.23■□□□□ 0.83
TRIM11-201ENST00000284551 OS9Q13438 667 aaPredicted RBP20.23■□□□□ 0.83
TRIM11-201ENST00000284551 TPRNQ4KMQ1 711 aa20.23■□□□□ 0.83
TRIM11-201ENST00000284551 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
TRIM11-201ENST00000284551 KLHDC4Q8TBB5 520 aa20.23■□□□□ 0.83
TRIM11-201ENST00000284551 KLHL40Q2TBA0 621 aa20.22■□□□□ 0.83
TRIM11-201ENST00000284551 N4BP2Q86UW6 1770 aaPredicted RBP20.22■□□□□ 0.83
TRIM11-201ENST00000284551 GOLGA6L22H0YM25 854 aa20.22■□□□□ 0.83
TRIM11-201ENST00000284551 SKOR2Q2VWA4 1001 aaPredicted RBP20.22■□□□□ 0.83
TRIM11-201ENST00000284551 COL9A3Q14050 684 aaPredicted RBP20.21■□□□□ 0.83
TRIM11-201ENST00000284551 KAZALD1Q96I82 304 aa20.21■□□□□ 0.83
TRIM11-201ENST00000284551 GDPD2Q9HCC8 539 aa20.21■□□□□ 0.83
TRIM11-201ENST00000284551 C9orf78Q9NZ63 289 aaPredicted RBP20.21■□□□□ 0.83
TRIM11-201ENST00000284551 NAP1L5Q96NT1 182 aaPredicted RBP20.21■□□□□ 0.83
TRIM11-201ENST00000284551 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
TRIM11-201ENST00000284551 MYL6BP14649 208 aa20.2■□□□□ 0.82
TRIM11-201ENST00000284551 PROSER2Q86WR7 435 aaPredicted RBP20.2■□□□□ 0.82
TRIM11-201ENST00000284551 KIF1BPQ96EK5 621 aa20.2■□□□□ 0.82
TRIM11-201ENST00000284551 SUCLG2Q96I99 432 aa20.19■□□□□ 0.82
TRIM11-201ENST00000284551 LMO7Q8WWI1 1683 aa20.19■□□□□ 0.82
TRIM11-201ENST00000284551 SIL1Q9H173 461 aa20.19■□□□□ 0.82
TRIM11-201ENST00000284551 NPHP4O75161 1426 aaPredicted RBP20.19■□□□□ 0.82
TRIM11-201ENST00000284551 CHRNA2Q15822 529 aa20.18■□□□□ 0.82
TRIM11-201ENST00000284551 ZSCAN23Q3MJ62 389 aa20.18■□□□□ 0.82
TRIM11-201ENST00000284551 CWC22Q9HCG8 908 aaKnown RBP20.18■□□□□ 0.82
TRIM11-201ENST00000284551 RAB11FIP3O75154 756 aa20.18■□□□□ 0.82
TRIM11-201ENST00000284551 SGSM2O43147 1006 aa20.18■□□□□ 0.82
TRIM11-201ENST00000284551 NLRP2Q9NX02 1062 aa20.18■□□□□ 0.82
TRIM11-201ENST00000284551 TLR7Q9NYK1 1049 aaKnown RBP20.18■□□□□ 0.82
TRIM11-201ENST00000284551 HSPA4P34932 840 aa20.17■□□□□ 0.82
TRIM11-201ENST00000284551 PTH1RQ03431 593 aa20.17■□□□□ 0.82
TRIM11-201ENST00000284551 PDIA6Q15084 440 aa20.17■□□□□ 0.82
TRIM11-201ENST00000284551 LSG1Q9H089 658 aaKnown RBP20.17■□□□□ 0.82
TRIM11-201ENST00000284551 SNX14Q9Y5W7 946 aa20.17■□□□□ 0.82
TRIM11-201ENST00000284551 MCCP23508 829 aa20.17■□□□□ 0.82
TRIM11-201ENST00000284551 AMOTQ4VCS5 1084 aa20.17■□□□□ 0.82
TRIM11-201ENST00000284551 KSR2Q6VAB6 950 aa20.17■□□□□ 0.82
TRIM11-201ENST00000284551 NFATC2IPQ8NCF5 419 aa20.17■□□□□ 0.82
TRIM11-201ENST00000284551 BICC1Q9H694 974 aaKnown RBP20.17■□□□□ 0.82
TRIM11-201ENST00000284551 TMEM63CQ9P1W3 806 aa20.17■□□□□ 0.82
TRIM11-201ENST00000284551 HOXB7P09629 217 aa20.16■□□□□ 0.82
TRIM11-201ENST00000284551 PKNOX2Q96KN3 472 aa20.16■□□□□ 0.82
TRIM11-201ENST00000284551 CCDC8Q9H0W5 538 aaPredicted RBP20.16■□□□□ 0.82
TRIM11-201ENST00000284551 PRIM1P49642 420 aaKnown RBP20.16■□□□□ 0.82
TRIM11-201ENST00000284551 CUL4AQ13619 759 aa20.16■□□□□ 0.82
TRIM11-201ENST00000284551 VSIG10Q8N0Z9 540 aa20.16■□□□□ 0.82
TRIM11-201ENST00000284551 RBSNQ9H1K0 784 aa20.15■□□□□ 0.82
TRIM11-201ENST00000284551 ERBB3P21860 1342 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms