RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 ANKS4BQ8N8V4 417 aa15.22■□□□□ 0.03
SMARCA5-201ENST00000283131 K7ELQ4 463 aaPredicted RBP15.22■□□□□ 0.03
SMARCA5-201ENST00000283131 MTIF2P46199 727 aaKnown RBP15.22■□□□□ 0.03
SMARCA5-201ENST00000283131 CCT4P50991 539 aaKnown RBP15.22■□□□□ 0.03
SMARCA5-201ENST00000283131 STX6O43752 255 aa15.22■□□□□ 0.03
SMARCA5-201ENST00000283131 IDH1O75874 414 aaKnown RBP15.22■□□□□ 0.03
SMARCA5-201ENST00000283131 JAKMIP1Q96N16 626 aaKnown RBP15.22■□□□□ 0.03
SMARCA5-201ENST00000283131 AMPD3Q01432 767 aa15.22■□□□□ 0.03
SMARCA5-201ENST00000283131 HDGFL1Q5TGJ6 251 aa15.21■□□□□ 0.03
SMARCA5-201ENST00000283131 AACSQ86V21 672 aa15.21■□□□□ 0.03
SMARCA5-201ENST00000283131 TBC1D5Q92609 795 aa15.21■□□□□ 0.03
SMARCA5-201ENST00000283131 MYL6BP14649 208 aa15.21■□□□□ 0.03
SMARCA5-201ENST00000283131 CCDC110Q8TBZ0 833 aa15.21■□□□□ 0.03
SMARCA5-201ENST00000283131 TXNDC16Q9P2K2 825 aa15.21■□□□□ 0.03
SMARCA5-201ENST00000283131 A0A087WZG4 1122 aa15.21■□□□□ 0.02
SMARCA5-201ENST00000283131 BICD1Q96G01 975 aa15.21■□□□□ 0.02
SMARCA5-201ENST00000283131 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.02
SMARCA5-201ENST00000283131 CTCFLQ8NI51 663 aaPredicted RBP15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 CALML4Q96GE6 196 aa15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 CAVIN4Q5BKX8 364 aa15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 ZNF444Q8N0Y2 327 aaPredicted RBP15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 EPSTI1Q96J88 318 aa15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 FAM184BQ9ULE4 1060 aa15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 SAMM50Q9Y512 469 aa15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 ZFYP08048 801 aaPredicted RBP15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 CCDC40Q4G0X9 1142 aa15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 MINDY4BA8MYZ0 360 aa15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
SMARCA5-201ENST00000283131 PFDN4Q9NQP4 134 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 TOM1L2Q6ZVM7 507 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 STMN4Q9H169 189 aaPredicted RBP15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 JADE2Q9NQC1 790 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 CCDC89Q8N998 374 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 USP47Q96K76 1375 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 CLIP2Q9UDT6 1046 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 ATP2A1O14983 1001 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 MSL1Q68DK7 614 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 ZNF652Q9Y2D9 606 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 CCDC117Q8IWD4 279 aaPredicted RBP15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 RASAL2Q9UJF2 1139 aa15.19■□□□□ 0.02
SMARCA5-201ENST00000283131 CEP120Q8N960 986 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 CCDC77Q9BR77 488 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 ATP2C2O75185 946 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 IQCA1Q86XH1 822 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 VTI1AQ96AJ9 217 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 NUTM2BA6NNL0 878 aaPredicted RBP15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 NUTM2EB1AL46 878 aaPredicted RBP15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 NUTM2AQ8IVF1 878 aaPredicted RBP15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 PNISRQ8TF01 805 aaKnown RBP15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 CWC27Q6UX04 472 aaKnown RBP15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 SLF2Q8IX21 1173 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 MIPOL1Q8TD10 442 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 CCT6BQ92526 530 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 CAMK4Q16566 473 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 USP37Q86T82 979 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 SPG7Q9UQ90 795 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 GTF2F1P35269 517 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 STIM2Q9P246 746 aa15.18■□□□□ 0.02
SMARCA5-201ENST00000283131 TTC14Q96N46 770 aa15.17■□□□□ 0.02
SMARCA5-201ENST00000283131 GAS8O95995 478 aa15.17■□□□□ 0.02
SMARCA5-201ENST00000283131 CCDC82Q8N4S0 544 aa15.17■□□□□ 0.02
SMARCA5-201ENST00000283131 TRERF1Q96PN7 1200 aa15.17■□□□□ 0.02
SMARCA5-201ENST00000283131 SELENOOQ9BVL4 669 aa15.17■□□□□ 0.02
SMARCA5-201ENST00000283131 TCP11L1Q9NUJ3 509 aa15.17■□□□□ 0.02
SMARCA5-201ENST00000283131 ANKIB1Q9P2G1 1089 aa15.17■□□□□ 0.02
SMARCA5-201ENST00000283131 RSPH3Q86UC2 560 aa15.17■□□□□ 0.02
SMARCA5-201ENST00000283131 C1orf115Q9H7X2 142 aa15.17■□□□□ 0.02
SMARCA5-201ENST00000283131 CCDC194A0A1B0GVG4 234 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 TAF12Q16514 161 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 GOLGA6L9A6NEM1 432 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 CFAP157Q5JU67 520 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 OPA1O60313 960 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 ATF7IPQ6VMQ6 1270 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 EHBP1Q8NDI1 1231 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 ESCO1Q5FWF5 840 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 GBP7Q8N8V2 638 aaPredicted RBP15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 RFC1P35251 1148 aaPredicted RBP15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 CNNM3Q8NE01 707 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 NAPBQ9H115 298 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 TRMT1LQ7Z2T5 733 aaKnown RBP15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 CACYBPQ9HB71 228 aaKnown RBP15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 NLRP5P59047 1200 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 TWISTNBQ3B726 338 aaPredicted RBP15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 CPLX3Q8WVH0 158 aa15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 PRKRIP1Q9H875 184 aaPredicted RBP15.16■□□□□ 0.02
SMARCA5-201ENST00000283131 MYO1BO43795 1136 aa15.15■□□□□ 0.02
SMARCA5-201ENST00000283131 TACC1O75410 805 aa15.15■□□□□ 0.02
SMARCA5-201ENST00000283131 CASTP20810 708 aaKnown RBP15.15■□□□□ 0.02
SMARCA5-201ENST00000283131 CCDC12Q8WUD4 166 aaPredicted RBP15.15■□□□□ 0.02
SMARCA5-201ENST00000283131 HAUS7Q99871 368 aa15.15■□□□□ 0.02
SMARCA5-201ENST00000283131 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
SMARCA5-201ENST00000283131 MTHFSP49914 203 aa15.15■□□□□ 0.02
SMARCA5-201ENST00000283131 GSTA5Q7RTV2 222 aa15.15■□□□□ 0.02
SMARCA5-201ENST00000283131 TMX1Q9H3N1 280 aa15.15■□□□□ 0.02
SMARCA5-201ENST00000283131 CTAGE5O15320 804 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms