RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 PRDM10Q9NQV6 1147 aa13.85□□□□□ -0.19
SCLT1-201ENST00000281142 ARHGEF25Q86VW2 580 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 COL18A1P39060 1754 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 ZNF853P0CG23 659 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 GNAI1P63096 354 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 TSHZ3Q63HK5 1081 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 ZNF428Q96B54 188 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 KIAA0232Q92628 1395 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 JCADQ9P266 1359 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 ST18O60284 1047 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 TPRNQ4KMQ1 711 aa13.84□□□□□ -0.19
SCLT1-201ENST00000281142 CHMP4BQ9H444 224 aaKnown RBP13.84□□□□□ -0.19
SCLT1-201ENST00000281142 HAP1P54257 671 aaPredicted RBP13.83□□□□□ -0.2
SCLT1-201ENST00000281142 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.2
SCLT1-201ENST00000281142 GDPD2Q9HCC8 539 aa13.83□□□□□ -0.2
SCLT1-201ENST00000281142 IFT57Q9NWB7 429 aa13.83□□□□□ -0.2
SCLT1-201ENST00000281142 AMPHP49418 695 aa13.83□□□□□ -0.2
SCLT1-201ENST00000281142 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.2
SCLT1-201ENST00000281142 ATP10DQ9P241 1426 aa13.83□□□□□ -0.2
SCLT1-201ENST00000281142 HOXC9P31274 260 aa13.82□□□□□ -0.2
SCLT1-201ENST00000281142 API5Q9BZZ5 524 aaKnown RBP13.82□□□□□ -0.2
SCLT1-201ENST00000281142 CPDO75976 1380 aa13.82□□□□□ -0.2
SCLT1-201ENST00000281142 FLT4P35916 1363 aa13.82□□□□□ -0.2
SCLT1-201ENST00000281142 CHRNA2Q15822 529 aa13.82□□□□□ -0.2
SCLT1-201ENST00000281142 ZNF830Q96NB3 372 aaPredicted RBP13.82□□□□□ -0.2
SCLT1-201ENST00000281142 CEP85Q6P2H3 762 aa13.82□□□□□ -0.2
SCLT1-201ENST00000281142 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
SCLT1-201ENST00000281142 AXIN2Q9Y2T1 843 aa13.82□□□□□ -0.2
SCLT1-201ENST00000281142 NEK4P51957 841 aa13.81□□□□□ -0.2
SCLT1-201ENST00000281142 FBXO41Q8TF61 875 aa13.81□□□□□ -0.2
SCLT1-201ENST00000281142 TMX3Q96JJ7 454 aa13.81□□□□□ -0.2
SCLT1-201ENST00000281142 MEIS3Q99687 375 aa13.81□□□□□ -0.2
SCLT1-201ENST00000281142 LMO7Q8WWI1 1683 aa13.81□□□□□ -0.2
SCLT1-201ENST00000281142 NUTM2BA6NNL0 878 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-201ENST00000281142 NUTM2EB1AL46 878 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-201ENST00000281142 NUTM2AQ8IVF1 878 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-201ENST00000281142 C17orf53Q8N3J3 647 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-201ENST00000281142 RTL1A6NKG5 1358 aa13.81□□□□□ -0.2
SCLT1-201ENST00000281142 CCDC39Q9UFE4 941 aa13.8□□□□□ -0.2
SCLT1-201ENST00000281142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.8□□□□□ -0.2
SCLT1-201ENST00000281142 KIF24Q5T7B8 1368 aa13.8□□□□□ -0.2
SCLT1-201ENST00000281142 RGPD2P0DJD1 1756 aa13.8□□□□□ -0.2
SCLT1-201ENST00000281142 FAM177BA6PVY3 158 aa13.8□□□□□ -0.2
SCLT1-201ENST00000281142 GADD45BO75293 160 aaPredicted RBP13.8□□□□□ -0.2
SCLT1-201ENST00000281142 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
SCLT1-201ENST00000281142 IP6K1Q92551 441 aa13.8□□□□□ -0.2
SCLT1-201ENST00000281142 PALD1Q9ULE6 856 aa13.8□□□□□ -0.2
SCLT1-201ENST00000281142 DLG5Q8TDM6 1919 aa13.8□□□□□ -0.2
SCLT1-201ENST00000281142 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
SCLT1-201ENST00000281142 LRP6O75581 1613 aa13.79□□□□□ -0.2
SCLT1-201ENST00000281142 IL13P35225 146 aa13.79□□□□□ -0.2
SCLT1-201ENST00000281142 SASS6Q6UVJ0 657 aa13.79□□□□□ -0.2
SCLT1-201ENST00000281142 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
SCLT1-201ENST00000281142 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
SCLT1-201ENST00000281142 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
SCLT1-201ENST00000281142 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
SCLT1-201ENST00000281142 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
SCLT1-201ENST00000281142 DYNC1I1O14576 645 aa13.78□□□□□ -0.2
SCLT1-201ENST00000281142 ERC2O15083 957 aa13.78□□□□□ -0.2
SCLT1-201ENST00000281142 EIF4A2Q14240 407 aaKnown RBP13.78□□□□□ -0.2
SCLT1-201ENST00000281142 ABCC6O95255 1503 aa13.78□□□□□ -0.2
SCLT1-201ENST00000281142 RGPD1P0DJD0 1748 aa13.78□□□□□ -0.2
SCLT1-201ENST00000281142 RGS12O14924 1447 aa13.78□□□□□ -0.2
SCLT1-201ENST00000281142 CSPP1Q1MSJ5 1256 aa13.77□□□□□ -0.2
SCLT1-201ENST00000281142 CASC1Q6TDU7 716 aa13.77□□□□□ -0.2
SCLT1-201ENST00000281142 REC8O95072 547 aa13.77□□□□□ -0.21
SCLT1-201ENST00000281142 BRD1O95696 1058 aa13.77□□□□□ -0.21
SCLT1-201ENST00000281142 LTV1Q96GA3 475 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-201ENST00000281142 TSPY26PQ9H489 355 aa13.77□□□□□ -0.21
SCLT1-201ENST00000281142 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.21
SCLT1-201ENST00000281142 DTNBO60941 627 aa13.76□□□□□ -0.21
SCLT1-201ENST00000281142 DMTNQ08495 405 aa13.76□□□□□ -0.21
SCLT1-201ENST00000281142 DNTTIP2Q5QJE6 756 aaKnown RBP13.76□□□□□ -0.21
SCLT1-201ENST00000281142 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
SCLT1-201ENST00000281142 MCM5P33992 734 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
SCLT1-201ENST00000281142 TCHHQ07283 1943 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 MBD3O95983 291 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 TTC12Q9H892 705 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-201ENST00000281142 USP25Q9UHP3 1055 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 ERBB3P21860 1342 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 PDE1AP54750 535 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-201ENST00000281142 ANKRD24Q8TF21 1146 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
SCLT1-201ENST00000281142 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
SCLT1-201ENST00000281142 F6X3S4 739 aa13.74□□□□□ -0.21
SCLT1-201ENST00000281142 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
SCLT1-201ENST00000281142 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
SCLT1-201ENST00000281142 MCM10Q7L590 875 aa13.74□□□□□ -0.21
SCLT1-201ENST00000281142 ZNF710Q8N1W2 664 aa13.74□□□□□ -0.21
SCLT1-201ENST00000281142 NRAPQ86VF7 1730 aa13.74□□□□□ -0.21
SCLT1-201ENST00000281142 SLC4A10Q6U841 1118 aa13.73□□□□□ -0.21
SCLT1-201ENST00000281142 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
SCLT1-201ENST00000281142 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
SCLT1-201ENST00000281142 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
SCLT1-201ENST00000281142 FAM208AQ9UK61 1670 aaKnown RBP13.73□□□□□ -0.21
SCLT1-201ENST00000281142 EYA1Q99502 592 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms