RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 ST5P78524 1137 aa12.52□□□□□ -0.41
ERGIC3-201ENST00000279052 SLC5A9Q2M3M2 681 aa12.52□□□□□ -0.41
ERGIC3-201ENST00000279052 TBC1D25Q3MII6 688 aa12.52□□□□□ -0.41
ERGIC3-201ENST00000279052 FHOD1Q9Y613 1164 aa12.52□□□□□ -0.41
ERGIC3-201ENST00000279052 ADGRL2O95490 1459 aa12.52□□□□□ -0.41
ERGIC3-201ENST00000279052 KIF2AO00139 706 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-201ENST00000279052 NEDD9Q14511 834 aa12.52□□□□□ -0.41
ERGIC3-201ENST00000279052 DRAXINQ8NBI3 349 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-201ENST00000279052 A1CFQ9NQ94 594 aaKnown RBP12.52□□□□□ -0.41
ERGIC3-201ENST00000279052 BRD4O60885 1362 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 PLA2G4AP47712 749 aa12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 ARMC2Q8NEN0 867 aa12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 NUP155O75694 1391 aa12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 UHRF1BP1LA0JNW5 1464 aa12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 PES1O00541 588 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 NLRP13Q86W25 1043 aa12.51□□□□□ -0.41
ERGIC3-201ENST00000279052 SOS1Q07889 1333 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 CGNL1Q0VF96 1302 aa12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 SNUPNO95149 360 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 CRYMQ14894 314 aa12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 PYCARDQ9ULZ3 195 aa12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 CARMIL2Q6F5E8 1435 aa12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 RTF1Q92541 710 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 EXOC4Q96A65 974 aa12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 ERO1AQ96HE7 468 aa12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 CRACR2AQ9BSW2 395 aa12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-201ENST00000279052 CDKL5O76039 1030 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 PNMA6AP0CW24 399 aaPredicted RBP12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 KCNB2Q92953 911 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 KIF2CQ99661 725 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 MMTAG2Q9BU76 263 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 KIF14Q15058 1648 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 IGHDP01880 384 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 TSPY4P0CV99 314 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 TSPY10P0CW01 314 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 TADA2BQ86TJ2 420 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 NCAPG2Q86XI2 1143 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
ERGIC3-201ENST00000279052 AP1G2O75843 785 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 ADCY5O95622 1261 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 OATP04181 439 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 BLOC1S6Q9UL45 172 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 BCORL1Q5H9F3 1711 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 IMPDH2P12268 514 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 ERC1Q8IUD2 1116 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 JPH4Q96JJ6 628 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 BAG1Q99933 345 aaPredicted RBP12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 TMEM63CQ9P1W3 806 aa12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 EIF4G3O43432 1585 aaKnown RBP12.48□□□□□ -0.41
ERGIC3-201ENST00000279052 A0A087WUV0 522 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 TMCO5BA8MYB1 307 aa12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 CDC37Q16543 378 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 H2AFXP16104 143 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 RDXP35241 583 aaKnown RBP12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 CCNHP51946 323 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 ZNF280DQ6N043 979 aa12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 DZIP3Q86Y13 1208 aaKnown RBP12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 SUN2Q9UH99 717 aa12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 NAT1P18440 290 aa12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 ELF2Q15723 593 aa12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 SRRTQ9BXP5 876 aaKnown RBP12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 USP25Q9UHP3 1055 aa12.47□□□□□ -0.41
ERGIC3-201ENST00000279052 KDM5CP41229 1560 aa12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 MBD3O95983 291 aa12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 PRPHP41219 470 aa12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 GET4Q7L5D6 327 aaPredicted RBP12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 CTCFLQ8NI51 663 aaPredicted RBP12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 MICAL1Q8TDZ2 1067 aa12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 RALGAPBQ86X10 1494 aa12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 PLEKHH2Q8IVE3 1493 aa12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 KIF15Q9NS87 1388 aa12.46□□□□□ -0.41
ERGIC3-201ENST00000279052 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.42
ERGIC3-201ENST00000279052 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.42
ERGIC3-201ENST00000279052 RBM47A0AV96 593 aaKnown RBP12.46□□□□□ -0.42
ERGIC3-201ENST00000279052 RASA3Q14644 834 aa12.46□□□□□ -0.42
ERGIC3-201ENST00000279052 ANKRD18AQ8IVF6 992 aa12.46□□□□□ -0.42
ERGIC3-201ENST00000279052 ARPC5LQ9BPX5 153 aa12.46□□□□□ -0.42
ERGIC3-201ENST00000279052 ADCY10Q96PN6 1610 aa12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 CROCC2H7BZ55 1655 aa12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 ST20-MTHFSA0A0A6YYL1 179 aa12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 RPS6KA5O75582 802 aa12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 NF2P35240 595 aa12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 HHATQ5VTY9 493 aa12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 MYLK4Q86YV6 388 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 RBM12BQ8IXT5 1001 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 ZCRB1Q8TBF4 217 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 N4BP2L2Q92802 583 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-201ENST00000279052 KCNF1Q9H3M0 494 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms