RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 ANKRD13DQ6ZTN6 518 aa10.94□□□□□ -0.66
SEC16A-201ENST00000277537 OVOS2A0A0J9YW53 1432 aa10.94□□□□□ -0.66
SEC16A-201ENST00000277537 OVOS2Q6IE36 1432 aa10.94□□□□□ -0.66
SEC16A-201ENST00000277537 PDE1AP54750 535 aa10.94□□□□□ -0.66
SEC16A-201ENST00000277537 GSE1Q14687 1217 aa10.94□□□□□ -0.66
SEC16A-201ENST00000277537 ANKARQ7Z5J8 1434 aa10.94□□□□□ -0.66
SEC16A-201ENST00000277537 REREQ9P2R6 1566 aa10.94□□□□□ -0.66
SEC16A-201ENST00000277537 PTCH1Q13635 1447 aa10.93□□□□□ -0.66
SEC16A-201ENST00000277537 KSR2Q6VAB6 950 aa10.93□□□□□ -0.66
SEC16A-201ENST00000277537 RUFY2Q8WXA3 655 aa10.93□□□□□ -0.66
SEC16A-201ENST00000277537 ZNF496Q96IT1 587 aaPredicted RBP10.93□□□□□ -0.66
SEC16A-201ENST00000277537 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
SEC16A-201ENST00000277537 ADGRL3Q9HAR2 1447 aa10.93□□□□□ -0.66
SEC16A-201ENST00000277537 USP31Q70CQ4 1352 aa10.93□□□□□ -0.66
SEC16A-201ENST00000277537 UPF3BQ9BZI7 483 aaKnown RBP10.93□□□□□ -0.66
SEC16A-201ENST00000277537 BTG4Q9NY30 223 aa10.93□□□□□ -0.66
SEC16A-201ENST00000277537 PROSER3Q2NL68 480 aa10.92□□□□□ -0.66
SEC16A-201ENST00000277537 RHPN1Q8TCX5 695 aa10.92□□□□□ -0.66
SEC16A-201ENST00000277537 DCAF5Q96JK2 942 aa10.92□□□□□ -0.66
SEC16A-201ENST00000277537 BOLA2Q9H3K6 86 aa10.92□□□□□ -0.66
SEC16A-201ENST00000277537 ERBB3P21860 1342 aa10.92□□□□□ -0.66
SEC16A-201ENST00000277537 USP44Q9H0E7 712 aa10.92□□□□□ -0.66
SEC16A-201ENST00000277537 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
SEC16A-201ENST00000277537 IL2RBP14784 551 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 RABEP1Q15276 862 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 KIF6Q6ZMV9 814 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 ERC1Q8IUD2 1116 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 COL3A1P02461 1466 aaPredicted RBP10.91□□□□□ -0.66
SEC16A-201ENST00000277537 GPTP24298 496 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
SEC16A-201ENST00000277537 USP16Q9Y5T5 823 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 DIP2AQ14689 1571 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 RTL1A6NKG5 1358 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 RIMS1Q86UR5 1692 aaKnown RBP10.91□□□□□ -0.66
SEC16A-201ENST00000277537 KIF13AQ9H1H9 1805 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 GRM8O00222 908 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 SLC52A2Q9HAB3 445 aa10.91□□□□□ -0.66
SEC16A-201ENST00000277537 K7ELQ4 463 aaPredicted RBP10.9□□□□□ -0.66
SEC16A-201ENST00000277537 EXOC5O00471 708 aa10.9□□□□□ -0.66
SEC16A-201ENST00000277537 HSP90B1P14625 803 aaKnown RBP10.9□□□□□ -0.66
SEC16A-201ENST00000277537 ZKSCAN1P17029 563 aaPredicted RBP10.9□□□□□ -0.66
SEC16A-201ENST00000277537 KLHDC4Q8TBB5 520 aa10.9□□□□□ -0.66
SEC16A-201ENST00000277537 DDX21Q9NR30 783 aaKnown RBP eCLIP10.9□□□□□ -0.66
SEC16A-201ENST00000277537 RAB11FIP3O75154 756 aa10.9□□□□□ -0.66
SEC16A-201ENST00000277537 CEP170BQ9Y4F5 1589 aaPredicted RBP10.9□□□□□ -0.66
SEC16A-201ENST00000277537 PHKG2P15735 406 aa10.9□□□□□ -0.67
SEC16A-201ENST00000277537 LINS1Q8NG48 757 aa10.9□□□□□ -0.67
SEC16A-201ENST00000277537 DDX49Q9Y6V7 483 aaKnown RBP10.9□□□□□ -0.67
SEC16A-201ENST00000277537 BRINP3Q76B58 766 aa10.89□□□□□ -0.67
SEC16A-201ENST00000277537 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
SEC16A-201ENST00000277537 A1BGP04217 495 aa10.89□□□□□ -0.67
SEC16A-201ENST00000277537 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
SEC16A-201ENST00000277537 ACSBG1Q96GR2 724 aa10.89□□□□□ -0.67
SEC16A-201ENST00000277537 BABAM1Q9NWV8 329 aa10.89□□□□□ -0.67
SEC16A-201ENST00000277537 FER1L4A9Z1Z3 1794 aa10.89□□□□□ -0.67
SEC16A-201ENST00000277537 STARD3NLO95772 234 aa10.89□□□□□ -0.67
SEC16A-201ENST00000277537 GLRX3O76003 335 aaKnown RBP10.88□□□□□ -0.67
SEC16A-201ENST00000277537 GSPT1P15170 499 aaKnown RBP10.88□□□□□ -0.67
SEC16A-201ENST00000277537 PLCB2Q00722 1185 aa10.88□□□□□ -0.67
SEC16A-201ENST00000277537 CCDC57Q2TAC2 916 aa10.88□□□□□ -0.67
SEC16A-201ENST00000277537 MCTP1Q6DN14 999 aa10.88□□□□□ -0.67
SEC16A-201ENST00000277537 BICC1Q9H694 974 aaKnown RBP10.88□□□□□ -0.67
SEC16A-201ENST00000277537 DDX11L8A8MPP1 907 aa10.87□□□□□ -0.67
SEC16A-201ENST00000277537 WASHC4Q2M389 1173 aa10.87□□□□□ -0.67
SEC16A-201ENST00000277537 NAP1L5Q96NT1 182 aaPredicted RBP10.87□□□□□ -0.67
SEC16A-201ENST00000277537 SOS1Q07889 1333 aaPredicted RBP10.87□□□□□ -0.67
SEC16A-201ENST00000277537 ALDH1L1O75891 902 aa10.87□□□□□ -0.67
SEC16A-201ENST00000277537 FKBP4Q02790 459 aaKnown RBP eCLIP10.87□□□□□ -0.67
SEC16A-201ENST00000277537 LMBR1LQ6UX01 489 aa10.87□□□□□ -0.67
SEC16A-201ENST00000277537 TRIM44Q96DX7 344 aaPredicted RBP10.87□□□□□ -0.67
SEC16A-201ENST00000277537 KIF24Q5T7B8 1368 aa10.86□□□□□ -0.67
SEC16A-201ENST00000277537 UBR1Q8IWV7 1749 aa10.86□□□□□ -0.67
SEC16A-201ENST00000277537 HOXB7P09629 217 aa10.86□□□□□ -0.67
SEC16A-201ENST00000277537 NGLY1Q96IV0 654 aa10.86□□□□□ -0.67
SEC16A-201ENST00000277537 CNNM1Q9NRU3 951 aa10.86□□□□□ -0.67
SEC16A-201ENST00000277537 ECHDC1Q9NTX5 307 aa10.86□□□□□ -0.67
SEC16A-201ENST00000277537 GOLGA6L3A6NEY3 463 aa10.86□□□□□ -0.67
SEC16A-201ENST00000277537 APPP05067 770 aa10.86□□□□□ -0.67
SEC16A-201ENST00000277537 TOMM22Q9NS69 142 aa10.86□□□□□ -0.67
SEC16A-201ENST00000277537 GOLGA6L4A6NEF3 574 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 BEND3Q5T5X7 828 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 ARHGAP23Q9P227 1491 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 USP32Q8NFA0 1604 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 C1orf167Q5SNV9 1468 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 CRB1P82279 1406 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 PCDH11XQ9BZA7 1347 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 PCDH11YQ9BZA8 1340 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 TRAK2O60296 914 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 BICDL1Q6ZP65 573 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 SUCLG2Q96I99 432 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 CEP126Q9P2H0 1117 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 CYP27B1O15528 508 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 RNF20Q5VTR2 975 aa10.85□□□□□ -0.67
SEC16A-201ENST00000277537 CWC25Q9NXE8 425 aaPredicted RBP10.85□□□□□ -0.67
SEC16A-201ENST00000277537 SLIT1O75093 1534 aa10.84□□□□□ -0.67
SEC16A-201ENST00000277537 LMTK3Q96Q04 1460 aa10.84□□□□□ -0.67
SEC16A-201ENST00000277537 KDRP35968 1356 aa10.84□□□□□ -0.67
SEC16A-201ENST00000277537 SPATA31A3Q5VYP0 1347 aa10.84□□□□□ -0.67
SEC16A-201ENST00000277537 PRPF40BQ6NWY9 871 aaKnown RBP10.84□□□□□ -0.67
SEC16A-201ENST00000277537 SHPRHQ149N8 1683 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms