RNA–Protein interactions for RNA: ENST00000273347.9

NXPE3-201, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-201ENST00000273347 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
NXPE3-201ENST00000273347 RNMTO43148 476 aaKnown RBP16.68■□□□□ 0.26
NXPE3-201ENST00000273347 PDIA6Q15084 440 aa16.68■□□□□ 0.26
NXPE3-201ENST00000273347 HSP90AB1P08238 724 aaKnown RBP16.67■□□□□ 0.26
NXPE3-201ENST00000273347 ERC2O15083 957 aa16.67■□□□□ 0.26
NXPE3-201ENST00000273347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.67■□□□□ 0.26
NXPE3-201ENST00000273347 DDX11L8A8MPP1 907 aa16.67■□□□□ 0.26
NXPE3-201ENST00000273347 ZGPATQ8N5A5 531 aaKnown RBP16.67■□□□□ 0.26
NXPE3-201ENST00000273347 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
NXPE3-201ENST00000273347 MTX1Q13505 466 aa16.66■□□□□ 0.26
NXPE3-201ENST00000273347 LRP10Q7Z4F1 713 aa16.66■□□□□ 0.26
NXPE3-201ENST00000273347 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
NXPE3-201ENST00000273347 UTYO14607 1347 aa16.65■□□□□ 0.26
NXPE3-201ENST00000273347 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
NXPE3-201ENST00000273347 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
NXPE3-201ENST00000273347 MPRIPQ6WCQ1 1025 aa16.65■□□□□ 0.26
NXPE3-201ENST00000273347 PPP1R42Q7Z4L9 355 aa16.65■□□□□ 0.26
NXPE3-201ENST00000273347 ANXA1P04083 346 aa16.64■□□□□ 0.26
NXPE3-201ENST00000273347 ERBB3P21860 1342 aa16.64■□□□□ 0.25
NXPE3-201ENST00000273347 BAG4O95429 457 aaKnown RBP16.64■□□□□ 0.25
NXPE3-201ENST00000273347 PSME1Q06323 249 aa16.64■□□□□ 0.25
NXPE3-201ENST00000273347 PI4KAP2A4QPH2 592 aa16.63■□□□□ 0.25
NXPE3-201ENST00000273347 PI4KAP1Q8N8J0 262 aa16.63■□□□□ 0.25
NXPE3-201ENST00000273347 ANKRD24Q8TF21 1146 aa16.63■□□□□ 0.25
NXPE3-201ENST00000273347 CUL4AQ13619 759 aa16.63■□□□□ 0.25
NXPE3-201ENST00000273347 GZF1Q9H116 711 aaPredicted RBP16.63■□□□□ 0.25
NXPE3-201ENST00000273347 TCHHQ07283 1943 aa16.62■□□□□ 0.25
NXPE3-201ENST00000273347 RRAGDQ9NQL2 400 aaPredicted RBP16.62■□□□□ 0.25
NXPE3-201ENST00000273347 DCCP43146 1447 aa16.62■□□□□ 0.25
NXPE3-201ENST00000273347 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
NXPE3-201ENST00000273347 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
NXPE3-201ENST00000273347 UBTFL1P0CB47 393 aaPredicted RBP16.62■□□□□ 0.25
NXPE3-201ENST00000273347 TOGARAM1Q9Y4F4 1720 aa16.61■□□□□ 0.25
NXPE3-201ENST00000273347 BTBD11A6QL63 1104 aa16.61■□□□□ 0.25
NXPE3-201ENST00000273347 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
NXPE3-201ENST00000273347 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
NXPE3-201ENST00000273347 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.61■□□□□ 0.25
NXPE3-201ENST00000273347 REC8O95072 547 aa16.6■□□□□ 0.25
NXPE3-201ENST00000273347 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
NXPE3-201ENST00000273347 RHPN1Q8TCX5 695 aa16.6■□□□□ 0.25
NXPE3-201ENST00000273347 IL1RAPL2Q9NP60 686 aa16.6■□□□□ 0.25
NXPE3-201ENST00000273347 CHAMP1Q96JM3 812 aa16.6■□□□□ 0.25
NXPE3-201ENST00000273347 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
NXPE3-201ENST00000273347 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
NXPE3-201ENST00000273347 C14orf37Q86TY3 774 aa16.59■□□□□ 0.25
NXPE3-201ENST00000273347 NUTM1Q86Y26 1132 aa16.59■□□□□ 0.25
NXPE3-201ENST00000273347 STRCQ7RTU9 1775 aa16.59■□□□□ 0.25
NXPE3-201ENST00000273347 RAB11FIP3O75154 756 aa16.59■□□□□ 0.25
NXPE3-201ENST00000273347 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
NXPE3-201ENST00000273347 L1TD1Q5T7N2 865 aaKnown RBP16.59■□□□□ 0.25
NXPE3-201ENST00000273347 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.25
NXPE3-201ENST00000273347 GOLGA6L3A6NEY3 463 aa16.58■□□□□ 0.24
NXPE3-201ENST00000273347 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
NXPE3-201ENST00000273347 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.24
NXPE3-201ENST00000273347 HSPA4P34932 840 aa16.58■□□□□ 0.24
NXPE3-201ENST00000273347 LSG1Q9H089 658 aaKnown RBP16.58■□□□□ 0.24
NXPE3-201ENST00000273347 EPB41L2O43491 1005 aaKnown RBP16.57■□□□□ 0.24
NXPE3-201ENST00000273347 ANAPC15P60006 121 aa16.57■□□□□ 0.24
NXPE3-201ENST00000273347 TMX3Q96JJ7 454 aa16.57■□□□□ 0.24
NXPE3-201ENST00000273347 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
NXPE3-201ENST00000273347 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
NXPE3-201ENST00000273347 TTC14Q96N46 770 aa16.56■□□□□ 0.24
NXPE3-201ENST00000273347 GRPEL1Q9HAV7 217 aa16.56■□□□□ 0.24
NXPE3-201ENST00000273347 RPAP1Q9BWH6 1393 aaPredicted RBP16.56■□□□□ 0.24
NXPE3-201ENST00000273347 IGKV5-2P06315 115 aa16.56■□□□□ 0.24
NXPE3-201ENST00000273347 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
NXPE3-201ENST00000273347 GPT2Q8TD30 523 aa16.56■□□□□ 0.24
NXPE3-201ENST00000273347 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
NXPE3-201ENST00000273347 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
NXPE3-201ENST00000273347 KCPQ6ZWJ8 1503 aa16.56■□□□□ 0.24
NXPE3-201ENST00000273347 SGSM2O43147 1006 aa16.55■□□□□ 0.24
NXPE3-201ENST00000273347 SRGAP3O43295 1099 aa16.55■□□□□ 0.24
NXPE3-201ENST00000273347 MAP3K2Q9Y2U5 619 aa16.55■□□□□ 0.24
NXPE3-201ENST00000273347 LAMA4Q16363 1823 aa16.55■□□□□ 0.24
NXPE3-201ENST00000273347 DDX17Q92841 729 aaKnown RBP16.55■□□□□ 0.24
NXPE3-201ENST00000273347 RAD50Q92878 1312 aa16.55■□□□□ 0.24
NXPE3-201ENST00000273347 CWF19L2Q2TBE0 894 aaKnown RBP16.55■□□□□ 0.24
NXPE3-201ENST00000273347 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
NXPE3-201ENST00000273347 JCADQ9P266 1359 aa16.55■□□□□ 0.24
NXPE3-201ENST00000273347 KSR2Q6VAB6 950 aa16.54■□□□□ 0.24
NXPE3-201ENST00000273347 CASC1Q6TDU7 716 aa16.54■□□□□ 0.24
NXPE3-201ENST00000273347 KCNB2Q92953 911 aa16.54■□□□□ 0.24
NXPE3-201ENST00000273347 NSFL1CQ9UNZ2 370 aaKnown RBP16.54■□□□□ 0.24
NXPE3-201ENST00000273347 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
NXPE3-201ENST00000273347 TNS3Q68CZ2 1445 aa16.54■□□□□ 0.24
NXPE3-201ENST00000273347 MRE11P49959 708 aa16.54■□□□□ 0.24
NXPE3-201ENST00000273347 ISY1Q9ULR0 285 aaKnown RBP16.54■□□□□ 0.24
NXPE3-201ENST00000273347 ALDH1L1O75891 902 aa16.53■□□□□ 0.24
NXPE3-201ENST00000273347 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
NXPE3-201ENST00000273347 KIF1BPQ96EK5 621 aa16.53■□□□□ 0.24
NXPE3-201ENST00000273347 NPHP3Q7Z494 1330 aa16.53■□□□□ 0.24
NXPE3-201ENST00000273347 SURF6O75683 361 aaKnown RBP16.53■□□□□ 0.24
NXPE3-201ENST00000273347 SASH1O94885 1247 aa16.53■□□□□ 0.24
NXPE3-201ENST00000273347 BRD1O95696 1058 aa16.53■□□□□ 0.24
NXPE3-201ENST00000273347 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
NXPE3-201ENST00000273347 SUCLG2Q96I99 432 aa16.53■□□□□ 0.24
NXPE3-201ENST00000273347 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
NXPE3-201ENST00000273347 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.24
NXPE3-201ENST00000273347 DDX60Q8IY21 1712 aaKnown RBP16.52■□□□□ 0.24
NXPE3-201ENST00000273347 TMEM94Q12767 1356 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms