RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 KIAA0556O60303 1618 aa15.58■□□□□ 0.09
SMG9-201ENST00000270066 F6X3S4 739 aa15.58■□□□□ 0.09
SMG9-201ENST00000270066 UQCRHLA0A096LP55 91 aa15.58■□□□□ 0.08
SMG9-201ENST00000270066 UQCRHP07919 91 aa15.58■□□□□ 0.08
SMG9-201ENST00000270066 CCDC196A0A1B0GTZ2 297 aa15.58■□□□□ 0.08
SMG9-201ENST00000270066 SNRPA1P09661 255 aaKnown RBP15.58■□□□□ 0.08
SMG9-201ENST00000270066 PPP1R42Q7Z4L9 355 aa15.58■□□□□ 0.08
SMG9-201ENST00000270066 CDC5LQ99459 802 aaKnown RBP15.58■□□□□ 0.08
SMG9-201ENST00000270066 MAP3K2Q9Y2U5 619 aa15.58■□□□□ 0.08
SMG9-201ENST00000270066 CBFA2T2O43439 604 aa15.58■□□□□ 0.08
SMG9-201ENST00000270066 SMARCA5O60264 1052 aaPredicted RBP15.58■□□□□ 0.08
SMG9-201ENST00000270066 PPIP5K1Q6PFW1 1433 aa15.58■□□□□ 0.08
SMG9-201ENST00000270066 PPFIBP1Q86W92 1011 aa15.57■□□□□ 0.08
SMG9-201ENST00000270066 ERCC4Q92889 916 aaPredicted RBP15.57■□□□□ 0.08
SMG9-201ENST00000270066 RNF41Q9H4P4 317 aaPredicted RBP15.57■□□□□ 0.08
SMG9-201ENST00000270066 CEP57L1Q8IYX8 460 aa15.57■□□□□ 0.08
SMG9-201ENST00000270066 ZBTB3Q9H5J0 574 aa15.57■□□□□ 0.08
SMG9-201ENST00000270066 MINDY4BA8MYZ0 360 aa15.56■□□□□ 0.08
SMG9-201ENST00000270066 TOM1O60784 492 aa15.56■□□□□ 0.08
SMG9-201ENST00000270066 TTF1Q15361 905 aaPredicted RBP15.56■□□□□ 0.08
SMG9-201ENST00000270066 PRPF40BQ6NWY9 871 aaKnown RBP15.56■□□□□ 0.08
SMG9-201ENST00000270066 EIF2AK4Q9P2K8 1649 aaKnown RBP15.56■□□□□ 0.08
SMG9-201ENST00000270066 HSP90B2PQ58FF3 399 aa15.56■□□□□ 0.08
SMG9-201ENST00000270066 TTLL5Q6EMB2 1281 aa15.56■□□□□ 0.08
SMG9-201ENST00000270066 TANGO6Q9C0B7 1094 aa15.56■□□□□ 0.08
SMG9-201ENST00000270066 PDCL3Q9H2J4 239 aa15.56■□□□□ 0.08
SMG9-201ENST00000270066 CCDC66A2RUB6 948 aa15.55■□□□□ 0.08
SMG9-201ENST00000270066 TNIP1Q15025 636 aa15.55■□□□□ 0.08
SMG9-201ENST00000270066 SKAP1Q86WV1 359 aa15.55■□□□□ 0.08
SMG9-201ENST00000270066 CCDC8Q9H0W5 538 aaPredicted RBP15.55■□□□□ 0.08
SMG9-201ENST00000270066 MBIPQ9NS73 344 aa15.55■□□□□ 0.08
SMG9-201ENST00000270066 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
SMG9-201ENST00000270066 SH2B1Q9NRF2 756 aaPredicted RBP15.55■□□□□ 0.08
SMG9-201ENST00000270066 SSBP05455 408 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMG9-201ENST00000270066 GPTP24298 496 aa15.54■□□□□ 0.08
SMG9-201ENST00000270066 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
SMG9-201ENST00000270066 ZNF444Q8N0Y2 327 aaPredicted RBP15.54■□□□□ 0.08
SMG9-201ENST00000270066 CTCFLQ8NI51 663 aaPredicted RBP15.54■□□□□ 0.08
SMG9-201ENST00000270066 CHRNA2Q15822 529 aa15.54■□□□□ 0.08
SMG9-201ENST00000270066 DDX46Q7L014 1031 aaKnown RBP15.54■□□□□ 0.08
SMG9-201ENST00000270066 IQCA1Q86XH1 822 aa15.54■□□□□ 0.08
SMG9-201ENST00000270066 EVI5LQ96CN4 794 aa15.54■□□□□ 0.08
SMG9-201ENST00000270066 PLEKHH1Q9ULM0 1364 aa15.54■□□□□ 0.08
SMG9-201ENST00000270066 MCM4P33991 863 aa15.54■□□□□ 0.08
SMG9-201ENST00000270066 SPC24Q8NBT2 197 aa15.54■□□□□ 0.08
SMG9-201ENST00000270066 TRIM27P14373 513 aa15.54■□□□□ 0.08
SMG9-201ENST00000270066 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
SMG9-201ENST00000270066 ZCRB1Q8TBF4 217 aaKnown RBP15.54■□□□□ 0.08
SMG9-201ENST00000270066 NUP62CLQ9H1M0 184 aa15.54■□□□□ 0.08
SMG9-201ENST00000270066 ZNF213O14771 459 aa15.53■□□□□ 0.08
SMG9-201ENST00000270066 LDHCP07864 332 aa15.53■□□□□ 0.08
SMG9-201ENST00000270066 WDHD1O75717 1129 aaPredicted RBP15.53■□□□□ 0.08
SMG9-201ENST00000270066 DEF6Q9H4E7 631 aa15.53■□□□□ 0.08
SMG9-201ENST00000270066 NOM1Q5C9Z4 860 aaKnown RBP15.53■□□□□ 0.08
SMG9-201ENST00000270066 PIBF1Q8WXW3 757 aa15.53■□□□□ 0.08
SMG9-201ENST00000270066 RFC4P35249 363 aa15.52■□□□□ 0.08
SMG9-201ENST00000270066 PHAXQ9H814 394 aaKnown RBP15.52■□□□□ 0.08
SMG9-201ENST00000270066 DDX11Q96FC9 970 aa15.52■□□□□ 0.08
SMG9-201ENST00000270066 ECHDC1Q9NTX5 307 aa15.52■□□□□ 0.08
SMG9-201ENST00000270066 PRDM10Q9NQV6 1147 aa15.52■□□□□ 0.07
SMG9-201ENST00000270066 SMTNL1A8MU46 457 aa15.52■□□□□ 0.07
SMG9-201ENST00000270066 PUS7Q96PZ0 661 aaKnown RBP15.52■□□□□ 0.07
SMG9-201ENST00000270066 TRAPPC8Q9Y2L5 1435 aa15.52■□□□□ 0.07
SMG9-201ENST00000270066 ST5P78524 1137 aa15.51■□□□□ 0.07
SMG9-201ENST00000270066 SPTY2D1Q68D10 685 aaPredicted RBP15.51■□□□□ 0.07
SMG9-201ENST00000270066 LDHAL6AQ6ZMR3 332 aa15.51■□□□□ 0.07
SMG9-201ENST00000270066 C6orf229H3BNL8 230 aa15.51■□□□□ 0.07
SMG9-201ENST00000270066 CCDC83Q8IWF9 413 aa15.51■□□□□ 0.07
SMG9-201ENST00000270066 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
SMG9-201ENST00000270066 SMARCC1Q92922 1105 aaPredicted RBP15.51■□□□□ 0.07
SMG9-201ENST00000270066 SLC12A7Q9Y666 1083 aa15.51■□□□□ 0.07
SMG9-201ENST00000270066 RANBP6O60518 1105 aaKnown RBP15.5■□□□□ 0.07
SMG9-201ENST00000270066 WDR62O43379 1518 aa15.5■□□□□ 0.07
SMG9-201ENST00000270066 TCOF1Q13428 1488 aaKnown RBP15.5■□□□□ 0.07
SMG9-201ENST00000270066 SHANK2Q9UPX8 1470 aa15.5■□□□□ 0.07
SMG9-201ENST00000270066 AKAP4Q5JQC9 854 aa15.5■□□□□ 0.07
SMG9-201ENST00000270066 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
SMG9-201ENST00000270066 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
SMG9-201ENST00000270066 CCDC152Q4G0S7 254 aa15.5■□□□□ 0.07
SMG9-201ENST00000270066 ARHGAP45Q92619 1136 aa15.5■□□□□ 0.07
SMG9-201ENST00000270066 FAM83GA6ND36 823 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 ANKRD13DQ6ZTN6 518 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 CUL5Q93034 780 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 UQCRFS1P1P0C7P4 283 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 EHMT1Q9H9B1 1298 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 UBAP1LF5GYI3 381 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 BAG3O95817 575 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 CCDC96Q2M329 555 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 UBE3BQ7Z3V4 1068 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 ATP5J2-PTCD1G3V325 749 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 C20orf194Q5TEA3 1177 aa15.49■□□□□ 0.07
SMG9-201ENST00000270066 UPF3BQ9BZI7 483 aaKnown RBP15.48■□□□□ 0.07
SMG9-201ENST00000270066 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
SMG9-201ENST00000270066 PAF1Q8N7H5 531 aa15.48■□□□□ 0.07
SMG9-201ENST00000270066 UBE2Q2Q8WVN8 375 aa15.48■□□□□ 0.07
SMG9-201ENST00000270066 C8orf76Q96K31 380 aa15.48■□□□□ 0.07
SMG9-201ENST00000270066 CATIPQ7Z7H3 387 aa15.48■□□□□ 0.07
SMG9-201ENST00000270066 RAB34Q9BZG1 259 aa15.48■□□□□ 0.07
SMG9-201ENST00000270066 TRPM2O94759 1503 aa15.48■□□□□ 0.07
SMG9-201ENST00000270066 ERLIN2O94905 339 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms