RNA–Protein interactions for RNA: ENST00000269209.6

GAREM1-201, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAREM1, Length 3,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-201ENST00000269209 RABEP1Q15276 862 aa12.42□□□□□ -0.42
GAREM1-201ENST00000269209 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
GAREM1-201ENST00000269209 PALD1Q9ULE6 856 aa12.42□□□□□ -0.42
GAREM1-201ENST00000269209 CHAMP1Q96JM3 812 aa12.42□□□□□ -0.42
GAREM1-201ENST00000269209 ADCY9O60503 1353 aa12.41□□□□□ -0.42
GAREM1-201ENST00000269209 KLHDC4Q8TBB5 520 aa12.41□□□□□ -0.42
GAREM1-201ENST00000269209 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
GAREM1-201ENST00000269209 RIC3Q7Z5B4 369 aa12.41□□□□□ -0.42
GAREM1-201ENST00000269209 ST18O60284 1047 aa12.4□□□□□ -0.42
GAREM1-201ENST00000269209 DTNBO60941 627 aa12.4□□□□□ -0.42
GAREM1-201ENST00000269209 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
GAREM1-201ENST00000269209 ZNF790Q6PG37 636 aa12.4□□□□□ -0.42
GAREM1-201ENST00000269209 ESYT1Q9BSJ8 1104 aa12.4□□□□□ -0.42
GAREM1-201ENST00000269209 OSBPL3Q9H4L5 887 aa12.4□□□□□ -0.42
GAREM1-201ENST00000269209 CHMLP26374 656 aa12.4□□□□□ -0.42
GAREM1-201ENST00000269209 FOXD4L6Q3SYB3 417 aaPredicted RBP12.4□□□□□ -0.42
GAREM1-201ENST00000269209 FOXD4L3Q6VB84 417 aaPredicted RBP12.4□□□□□ -0.42
GAREM1-201ENST00000269209 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
GAREM1-201ENST00000269209 DDIT3P35638 169 aa12.4□□□□□ -0.43
GAREM1-201ENST00000269209 CWC27Q6UX04 472 aaKnown RBP12.39□□□□□ -0.43
GAREM1-201ENST00000269209 ZNF496Q96IT1 587 aaPredicted RBP12.39□□□□□ -0.43
GAREM1-201ENST00000269209 USP16Q9Y5T5 823 aa12.39□□□□□ -0.43
GAREM1-201ENST00000269209 SALL3Q9BXA9 1300 aa12.39□□□□□ -0.43
GAREM1-201ENST00000269209 AK9Q5TCS8 1911 aa12.39□□□□□ -0.43
GAREM1-201ENST00000269209 RAB3GAP1Q15042 981 aa12.39□□□□□ -0.43
GAREM1-201ENST00000269209 KSR2Q6VAB6 950 aa12.39□□□□□ -0.43
GAREM1-201ENST00000269209 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
GAREM1-201ENST00000269209 FAM208AQ9UK61 1670 aaKnown RBP12.38□□□□□ -0.43
GAREM1-201ENST00000269209 TPRNQ4KMQ1 711 aa12.38□□□□□ -0.43
GAREM1-201ENST00000269209 COPS6Q7L5N1 327 aa12.38□□□□□ -0.43
GAREM1-201ENST00000269209 KIF1BPQ96EK5 621 aa12.38□□□□□ -0.43
GAREM1-201ENST00000269209 GBP4Q96PP9 640 aa12.38□□□□□ -0.43
GAREM1-201ENST00000269209 SPG7Q9UQ90 795 aa12.38□□□□□ -0.43
GAREM1-201ENST00000269209 NPHP3Q7Z494 1330 aa12.38□□□□□ -0.43
GAREM1-201ENST00000269209 LRRC37A3O60309 1634 aa12.38□□□□□ -0.43
GAREM1-201ENST00000269209 NCLP19338 710 aaKnown RBP12.38□□□□□ -0.43
GAREM1-201ENST00000269209 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
GAREM1-201ENST00000269209 PANK2Q9BZ23 570 aa12.38□□□□□ -0.43
GAREM1-201ENST00000269209 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 HOXB7P09629 217 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 XAGE3Q8WTP9 111 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 BICC1Q9H694 974 aaKnown RBP12.37□□□□□ -0.43
GAREM1-201ENST00000269209 SLC52A2Q9HAB3 445 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.37□□□□□ -0.43
GAREM1-201ENST00000269209 ADAMTSL3P82987 1691 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
GAREM1-201ENST00000269209 PHKG2P15735 406 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 MYD88Q99836 296 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 ZNF330Q9Y3S2 320 aaPredicted RBP12.37□□□□□ -0.43
GAREM1-201ENST00000269209 NCOA3Q9Y6Q9 1424 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 GOLGA6L3A6NEY3 463 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 CYP27B1O15528 508 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 POLA2Q14181 598 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 MCTP1Q6DN14 999 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 DDX54Q8TDD1 881 aaKnown RBP12.37□□□□□ -0.43
GAREM1-201ENST00000269209 SUCLG2Q96I99 432 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
GAREM1-201ENST00000269209 CLASRPQ8N2M8 674 aaKnown RBP12.36□□□□□ -0.43
GAREM1-201ENST00000269209 CCDC8Q9H0W5 538 aaPredicted RBP12.36□□□□□ -0.43
GAREM1-201ENST00000269209 PRDM11Q9NQV5 511 aa12.36□□□□□ -0.43
GAREM1-201ENST00000269209 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
GAREM1-201ENST00000269209 CADPS2Q86UW7 1296 aa12.36□□□□□ -0.43
GAREM1-201ENST00000269209 HYPKQ9NX55 129 aa12.36□□□□□ -0.43
GAREM1-201ENST00000269209 GRM8O00222 908 aa12.35□□□□□ -0.43
GAREM1-201ENST00000269209 DDX58O95786 925 aaKnown RBP12.35□□□□□ -0.43
GAREM1-201ENST00000269209 AACSQ86V21 672 aa12.35□□□□□ -0.43
GAREM1-201ENST00000269209 IFNL2Q8IZJ0 200 aa12.35□□□□□ -0.43
GAREM1-201ENST00000269209 PI4K2BQ8TCG2 481 aa12.35□□□□□ -0.43
GAREM1-201ENST00000269209 DDX21Q9NR30 783 aaKnown RBP eCLIP12.35□□□□□ -0.43
GAREM1-201ENST00000269209 IFIT2P09913 472 aaKnown RBP12.35□□□□□ -0.43
GAREM1-201ENST00000269209 PDIA6Q15084 440 aa12.35□□□□□ -0.43
GAREM1-201ENST00000269209 ZNF142P52746 1687 aaPredicted RBP12.35□□□□□ -0.43
GAREM1-201ENST00000269209 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
GAREM1-201ENST00000269209 MCCP23508 829 aa12.35□□□□□ -0.43
GAREM1-201ENST00000269209 CABP4P57796 275 aa12.35□□□□□ -0.43
GAREM1-201ENST00000269209 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
GAREM1-201ENST00000269209 RGPD5Q99666 1765 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 IGKV5-2P06315 115 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 CPA1P15085 419 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 LINS1Q8NG48 757 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 TMX3Q96JJ7 454 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 CHMP4AQ9BY43 222 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 STAP2Q9UGK3 403 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 MEGF6O75095 1541 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 NEXNQ0ZGT2 675 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 KAZALD1Q96I82 304 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 DDX49Q9Y6V7 483 aaKnown RBP12.34□□□□□ -0.43
GAREM1-201ENST00000269209 MST1RQ04912 1400 aa12.34□□□□□ -0.43
GAREM1-201ENST00000269209 BAG4O95429 457 aaKnown RBP12.33□□□□□ -0.44
GAREM1-201ENST00000269209 XRCC6P12956 609 aaKnown RBP eCLIP12.33□□□□□ -0.44
GAREM1-201ENST00000269209 CNTROBQ8N137 903 aa12.33□□□□□ -0.44
GAREM1-201ENST00000269209 TLR7Q9NYK1 1049 aaKnown RBP12.33□□□□□ -0.44
GAREM1-201ENST00000269209 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
GAREM1-201ENST00000269209 NDUFB9Q9Y6M9 179 aa12.33□□□□□ -0.44
GAREM1-201ENST00000269209 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
GAREM1-201ENST00000269209 KDM6AO15550 1401 aaPredicted RBP12.33□□□□□ -0.44
GAREM1-201ENST00000269209 GOLGA6L22H0YM25 854 aa12.32□□□□□ -0.44
GAREM1-201ENST00000269209 G3BP1Q13283 466 aaKnown RBP eCLIP12.32□□□□□ -0.44
GAREM1-201ENST00000269209 EPHA10Q5JZY3 1008 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms