RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 ERC1Q8IUD2 1116 aa9.93□□□□□ -0.82
NEDD1-201ENST00000266742 PPP1R9BQ96SB3 815 aa9.93□□□□□ -0.82
NEDD1-201ENST00000266742 WDR33Q9C0J8 1336 aaKnown RBP9.93□□□□□ -0.82
NEDD1-201ENST00000266742 C9orf78Q9NZ63 289 aaPredicted RBP9.93□□□□□ -0.82
NEDD1-201ENST00000266742 GLRX3O76003 335 aaKnown RBP9.93□□□□□ -0.82
NEDD1-201ENST00000266742 PKP1Q13835 747 aa9.93□□□□□ -0.82
NEDD1-201ENST00000266742 POLA2Q14181 598 aa9.93□□□□□ -0.82
NEDD1-201ENST00000266742 ESCO1Q5FWF5 840 aa9.93□□□□□ -0.82
NEDD1-201ENST00000266742 PIK3C2AO00443 1686 aa9.93□□□□□ -0.82
NEDD1-201ENST00000266742 PI4KAP2A4QPH2 592 aa9.92□□□□□ -0.82
NEDD1-201ENST00000266742 NOL8Q76FK4 1167 aaKnown RBP9.92□□□□□ -0.82
NEDD1-201ENST00000266742 PI4KAP1Q8N8J0 262 aa9.92□□□□□ -0.82
NEDD1-201ENST00000266742 CEMIPQ8WUJ3 1361 aa9.92□□□□□ -0.82
NEDD1-201ENST00000266742 TTC41PQ6P2S7 1318 aa9.92□□□□□ -0.82
NEDD1-201ENST00000266742 BRD1O95696 1058 aa9.92□□□□□ -0.82
NEDD1-201ENST00000266742 HSPA4P34932 840 aa9.92□□□□□ -0.82
NEDD1-201ENST00000266742 DIAPH3Q9NSV4 1193 aa9.92□□□□□ -0.82
NEDD1-201ENST00000266742 CHPF2Q9P2E5 772 aa9.92□□□□□ -0.82
NEDD1-201ENST00000266742 DDX58O95786 925 aaKnown RBP9.92□□□□□ -0.82
NEDD1-201ENST00000266742 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.92□□□□□ -0.82
NEDD1-201ENST00000266742 ATP6V1DQ9Y5K8 247 aa9.92□□□□□ -0.82
NEDD1-201ENST00000266742 ALDH1L1O75891 902 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 HS1BP3Q53T59 392 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
NEDD1-201ENST00000266742 NBPF6Q5VWK0 638 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 ZSCAN30Q86W11 494 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 FOXD4L4Q8WXT5 416 aaPredicted RBP9.91□□□□□ -0.82
NEDD1-201ENST00000266742 NBPF4Q96M43 638 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 ADGRL3Q9HAR2 1447 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 BEND3Q5T5X7 828 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 IL17RAQ96F46 866 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 UPF3BQ9BZI7 483 aaKnown RBP9.91□□□□□ -0.82
NEDD1-201ENST00000266742 IFIT2P09913 472 aaKnown RBP9.91□□□□□ -0.82
NEDD1-201ENST00000266742 RIMS1Q86UR5 1692 aaKnown RBP9.91□□□□□ -0.82
NEDD1-201ENST00000266742 LRRC37A3O60309 1634 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 LRSAM1Q6UWE0 723 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 PALD1Q9ULE6 856 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 ZDHHC9Q9Y397 364 aa9.91□□□□□ -0.82
NEDD1-201ENST00000266742 CACNA1FO60840 1977 aa9.9□□□□□ -0.82
NEDD1-201ENST00000266742 SGSM2O43147 1006 aa9.9□□□□□ -0.82
NEDD1-201ENST00000266742 CSPP1Q1MSJ5 1256 aa9.9□□□□□ -0.82
NEDD1-201ENST00000266742 LGR6Q9HBX8 967 aa9.9□□□□□ -0.82
NEDD1-201ENST00000266742 RAD50Q92878 1312 aa9.9□□□□□ -0.82
NEDD1-201ENST00000266742 NBPF7P0C2Y1 421 aaPredicted RBP9.9□□□□□ -0.82
NEDD1-201ENST00000266742 HIP1O00291 1037 aa9.9□□□□□ -0.83
NEDD1-201ENST00000266742 LMOD2Q6P5Q4 547 aa9.89□□□□□ -0.83
NEDD1-201ENST00000266742 MPRIPQ6WCQ1 1025 aa9.89□□□□□ -0.83
NEDD1-201ENST00000266742 UNC5CLQ8IV45 518 aa9.89□□□□□ -0.83
NEDD1-201ENST00000266742 HYPKQ9NX55 129 aa9.89□□□□□ -0.83
NEDD1-201ENST00000266742 XRN1Q8IZH2 1706 aaKnown RBP9.89□□□□□ -0.83
NEDD1-201ENST00000266742 FAM208AQ9UK61 1670 aaKnown RBP9.89□□□□□ -0.83
NEDD1-201ENST00000266742 ZKSCAN1P17029 563 aaPredicted RBP9.89□□□□□ -0.83
NEDD1-201ENST00000266742 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
NEDD1-201ENST00000266742 KSR2Q6VAB6 950 aa9.89□□□□□ -0.83
NEDD1-201ENST00000266742 GPT2Q8TD30 523 aa9.89□□□□□ -0.83
NEDD1-201ENST00000266742 ECHDC1Q9NTX5 307 aa9.89□□□□□ -0.83
NEDD1-201ENST00000266742 LIMCH1Q9UPQ0 1083 aa9.89□□□□□ -0.83
NEDD1-201ENST00000266742 MAP4K4O95819 1239 aaPredicted RBP9.89□□□□□ -0.83
NEDD1-201ENST00000266742 PDIA4P13667 645 aaKnown RBP9.89□□□□□ -0.83
NEDD1-201ENST00000266742 CWC27Q6UX04 472 aaKnown RBP9.89□□□□□ -0.83
NEDD1-201ENST00000266742 PI4K2BQ8TCG2 481 aa9.89□□□□□ -0.83
NEDD1-201ENST00000266742 G3BP1Q13283 466 aaKnown RBP eCLIP9.88□□□□□ -0.83
NEDD1-201ENST00000266742 MTX1Q13505 466 aa9.88□□□□□ -0.83
NEDD1-201ENST00000266742 SMC3Q9UQE7 1217 aa9.88□□□□□ -0.83
NEDD1-201ENST00000266742 NCAPD2Q15021 1401 aa9.88□□□□□ -0.83
NEDD1-201ENST00000266742 NWD1Q149M9 1564 aa9.88□□□□□ -0.83
NEDD1-201ENST00000266742 SYCE3A1L190 88 aa9.88□□□□□ -0.83
NEDD1-201ENST00000266742 RNMTO43148 476 aaKnown RBP9.88□□□□□ -0.83
NEDD1-201ENST00000266742 KCNJ4P48050 445 aa9.88□□□□□ -0.83
NEDD1-201ENST00000266742 MAP3K2Q9Y2U5 619 aa9.88□□□□□ -0.83
NEDD1-201ENST00000266742 LETM1O95202 739 aaPredicted RBP9.88□□□□□ -0.83
NEDD1-201ENST00000266742 NEXNQ0ZGT2 675 aa9.88□□□□□ -0.83
NEDD1-201ENST00000266742 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
NEDD1-201ENST00000266742 RGPD8O14715 1765 aaPredicted RBP9.88□□□□□ -0.83
NEDD1-201ENST00000266742 GCP02774 474 aa9.87□□□□□ -0.83
NEDD1-201ENST00000266742 EVI5LQ96CN4 794 aa9.87□□□□□ -0.83
NEDD1-201ENST00000266742 RBSNQ9H1K0 784 aa9.87□□□□□ -0.83
NEDD1-201ENST00000266742 TSPY26PQ9H489 355 aa9.87□□□□□ -0.83
NEDD1-201ENST00000266742 RBM27Q9P2N5 1060 aaKnown RBP9.87□□□□□ -0.83
NEDD1-201ENST00000266742 USP42Q9H9J4 1324 aaKnown RBP9.87□□□□□ -0.83
NEDD1-201ENST00000266742 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.87□□□□□ -0.83
NEDD1-201ENST00000266742 LINS1Q8NG48 757 aa9.87□□□□□ -0.83
NEDD1-201ENST00000266742 TMEM63CQ9P1W3 806 aa9.87□□□□□ -0.83
NEDD1-201ENST00000266742 SNX14Q9Y5W7 946 aa9.87□□□□□ -0.83
NEDD1-201ENST00000266742 FAM184AQ8NB25 1140 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 SH2B1Q9NRF2 756 aaPredicted RBP9.86□□□□□ -0.83
NEDD1-201ENST00000266742 CCDC39Q9UFE4 941 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 CYP46A1Q9Y6A2 500 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 FER1L4A9Z1Z3 1794 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 GIGYF1O75420 1035 aaPredicted RBP9.86□□□□□ -0.83
NEDD1-201ENST00000266742 MCM5P33992 734 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 RNF20Q5VTR2 975 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 LRRC59Q96AG4 307 aaKnown RBP9.86□□□□□ -0.83
NEDD1-201ENST00000266742 USP54Q70EL1 1684 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 PTMAP06454 111 aaKnown RBP9.86□□□□□ -0.83
NEDD1-201ENST00000266742 PSMA5P28066 241 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 ANKRD24Q8TF21 1146 aa9.86□□□□□ -0.83
NEDD1-201ENST00000266742 LSG1Q9H089 658 aaKnown RBP9.86□□□□□ -0.83
NEDD1-201ENST00000266742 KCNQ3O43525 872 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms