RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 PDZRN3Q9UPQ7 1066 aa9.77□□□□□ -0.85
COL6A5-201ENST00000265379 ZNF396Q96N95 335 aaPredicted RBP9.77□□□□□ -0.85
COL6A5-201ENST00000265379 ODF2Q5BJF6 829 aa9.77□□□□□ -0.85
COL6A5-201ENST00000265379 CCDC158Q5M9N0 1113 aa9.77□□□□□ -0.85
COL6A5-201ENST00000265379 ZNF526Q8TF50 670 aaPredicted RBP9.77□□□□□ -0.85
COL6A5-201ENST00000265379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.77□□□□□ -0.85
COL6A5-201ENST00000265379 SSH1Q8WYL5 1049 aa9.76□□□□□ -0.85
COL6A5-201ENST00000265379 GTPBP4Q9BZE4 634 aaKnown RBP9.76□□□□□ -0.85
COL6A5-201ENST00000265379 KIF20BQ96Q89 1820 aa9.76□□□□□ -0.85
COL6A5-201ENST00000265379 CPLX1O14810 134 aa9.76□□□□□ -0.85
COL6A5-201ENST00000265379 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
COL6A5-201ENST00000265379 NOL8Q76FK4 1167 aaKnown RBP9.75□□□□□ -0.85
COL6A5-201ENST00000265379 USP8P40818 1118 aa9.75□□□□□ -0.85
COL6A5-201ENST00000265379 SMARCC1Q92922 1105 aaPredicted RBP9.75□□□□□ -0.85
COL6A5-201ENST00000265379 SMC3Q9UQE7 1217 aa9.75□□□□□ -0.85
COL6A5-201ENST00000265379 TTF1Q15361 905 aaPredicted RBP9.75□□□□□ -0.85
COL6A5-201ENST00000265379 ANO2Q9NQ90 1003 aa9.75□□□□□ -0.85
COL6A5-201ENST00000265379 TXLNBQ8N3L3 684 aa9.75□□□□□ -0.85
COL6A5-201ENST00000265379 CCDC43Q96MW1 224 aaKnown RBP9.75□□□□□ -0.85
COL6A5-201ENST00000265379 IGSF3O75054 1194 aa9.75□□□□□ -0.85
COL6A5-201ENST00000265379 MX1P20591 662 aa9.75□□□□□ -0.85
COL6A5-201ENST00000265379 CT47A1Q5JQC4 288 aaPredicted RBP9.75□□□□□ -0.85
COL6A5-201ENST00000265379 DNAAF4Q8WXU2 420 aa9.75□□□□□ -0.85
COL6A5-201ENST00000265379 PCDH11XQ9BZA7 1347 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 PCDH11YQ9BZA8 1340 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 IP6K1Q92551 441 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 CDCA7LQ96GN5 454 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 PLIN1O60240 522 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 ZFYP08048 801 aaPredicted RBP9.74□□□□□ -0.85
COL6A5-201ENST00000265379 TSPYL1Q9H0U9 437 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 USP31Q70CQ4 1352 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 CYP46A1Q9Y6A2 500 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 USP6P35125 1406 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 K7ELQ4 463 aaPredicted RBP9.74□□□□□ -0.85
COL6A5-201ENST00000265379 PYM1Q9BRP8 204 aaKnown RBP9.74□□□□□ -0.85
COL6A5-201ENST00000265379 MYO6Q9UM54 1294 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 TRIM27P14373 513 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 CCDC178Q5BJE1 867 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 CCDC173Q0VFZ6 552 aa9.74□□□□□ -0.85
COL6A5-201ENST00000265379 CAVIN1Q6NZI2 390 aaKnown RBP9.74□□□□□ -0.85
COL6A5-201ENST00000265379 OVOS2A0A0G2JMS6 1433 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 CACNA1FO60840 1977 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 CPS1P31327 1500 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 SURF6O75683 361 aaKnown RBP9.73□□□□□ -0.85
COL6A5-201ENST00000265379 CCDC73Q6ZRK6 1079 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 DCAF5Q96JK2 942 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 BCL2L13Q9BXK5 485 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 FLIIQ13045 1269 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 HOMER1Q86YM7 354 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 RILPL2Q969X0 211 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 SLC26A8Q96RN1 970 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 ARGLU1Q9NWB6 273 aaPredicted RBP9.73□□□□□ -0.85
COL6A5-201ENST00000265379 NPHP4O75161 1426 aaPredicted RBP9.73□□□□□ -0.85
COL6A5-201ENST00000265379 DCCP43146 1447 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 PTPRUQ92729 1446 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 PIK3C2BO00750 1634 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 MYH9P35579 1960 aaKnown RBP9.73□□□□□ -0.85
COL6A5-201ENST00000265379 NME9Q86XW9 330 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 SMC5Q8IY18 1101 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 MNS1Q8NEH6 495 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 POLKQ9UBT6 870 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 SNRPA1P09661 255 aaKnown RBP9.73□□□□□ -0.85
COL6A5-201ENST00000265379 ZNF592Q92610 1267 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 SNX21Q969T3 373 aa9.73□□□□□ -0.85
COL6A5-201ENST00000265379 MCTP1Q6DN14 999 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 DDX49Q9Y6V7 483 aaKnown RBP9.72□□□□□ -0.85
COL6A5-201ENST00000265379 LRRC7Q96NW7 1537 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 EIF2S2P20042 333 aaKnown RBP9.72□□□□□ -0.85
COL6A5-201ENST00000265379 SLF2Q8IX21 1173 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 U3KPZ7 1027 aaPredicted RBP9.72□□□□□ -0.85
COL6A5-201ENST00000265379 PHAXQ9H814 394 aaKnown RBP9.72□□□□□ -0.85
COL6A5-201ENST00000265379 R3HCC1Q9Y3T6 440 aaKnown RBP9.72□□□□□ -0.85
COL6A5-201ENST00000265379 NUCB1Q02818 461 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 CFAP45Q9UL16 551 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 ANKRD44Q8N8A2 993 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 CCDC196A0A1B0GTZ2 297 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 TOM1L2Q6ZVM7 507 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 LNPKQ9C0E8 428 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 FOXD4L1Q9NU39 408 aa9.72□□□□□ -0.85
COL6A5-201ENST00000265379 ARHGEF28Q8N1W1 1705 aaKnown RBP9.72□□□□□ -0.85
COL6A5-201ENST00000265379 VPS37DQ86XT2 251 aa9.71□□□□□ -0.85
COL6A5-201ENST00000265379 HSP90B2PQ58FF3 399 aa9.71□□□□□ -0.85
COL6A5-201ENST00000265379 BCCIPQ9P287 314 aaKnown RBP eCLIP9.71□□□□□ -0.85
COL6A5-201ENST00000265379 IFT172Q9UG01 1749 aa9.71□□□□□ -0.85
COL6A5-201ENST00000265379 EVI5LQ96CN4 794 aa9.71□□□□□ -0.85
COL6A5-201ENST00000265379 TMEM57Q8N5G2 664 aa9.71□□□□□ -0.86
COL6A5-201ENST00000265379 MBIPQ9NS73 344 aa9.71□□□□□ -0.86
COL6A5-201ENST00000265379 TMEM131LA2VDJ0 1609 aa9.71□□□□□ -0.86
COL6A5-201ENST00000265379 ADGRB1O14514 1584 aa9.71□□□□□ -0.86
COL6A5-201ENST00000265379 CCDC57Q2TAC2 916 aa9.71□□□□□ -0.86
COL6A5-201ENST00000265379 KNDC1Q76NI1 1749 aa9.71□□□□□ -0.86
COL6A5-201ENST00000265379 WAPLQ7Z5K2 1190 aa9.71□□□□□ -0.86
COL6A5-201ENST00000265379 RGS12O14924 1447 aa9.71□□□□□ -0.86
COL6A5-201ENST00000265379 TMOD3Q9NYL9 352 aa9.7□□□□□ -0.86
COL6A5-201ENST00000265379 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
COL6A5-201ENST00000265379 RBM27Q9P2N5 1060 aaKnown RBP9.7□□□□□ -0.86
COL6A5-201ENST00000265379 FER1L4A9Z1Z3 1794 aa9.7□□□□□ -0.86
COL6A5-201ENST00000265379 FOXD4L5Q5VV16 416 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms