RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 GMNNO75496 209 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 ATP2A2P16615 1042 aaKnown RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 GTF2F1P35269 517 aaKnown RBP eCLIP6.29□□□□□ -1.4
XRN1-201ENST00000264951 HLTFQ14527 1009 aaKnown RBP eCLIP6.29□□□□□ -1.4
XRN1-201ENST00000264951 PHLDB2Q86SQ0 1253 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 WDR63Q8IWG1 891 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 UBAC1Q9BSL1 405 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 TERF1P54274 439 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 SF3B2Q13435 895 aaKnown RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 NEUROD6Q96NK8 337 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 TSPYL4Q9UJ04 414 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 SMG6Q86US8 1419 aaKnown RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 CTNNA2P26232 953 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 PPP4R3BQ5MIZ7 849 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 GGT6Q6P531 493 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 SNW1Q13573 536 aaKnown RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 RIC3Q7Z5B4 369 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 GABPB2Q8TAK5 448 aaPredicted RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 SUDS3Q9H7L9 328 aaPredicted RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 RMND1Q9NWS8 449 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 EIF4G1Q04637 1599 aaKnown RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 EIF3DO15371 548 aaKnown RBP eCLIP6.28□□□□□ -1.4
XRN1-201ENST00000264951 MAP3K21Q5TCX8 1036 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 RAPGEF4Q8WZA2 1011 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 SEC62Q99442 399 aaKnown RBP6.28□□□□□ -1.4
XRN1-201ENST00000264951 FEZ2Q9UHY8 353 aaPredicted RBP6.28□□□□□ -1.4
XRN1-201ENST00000264951 UBE4AQ14139 1066 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 MAP7D1Q3KQU3 841 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 OTUD6BQ8N6M0 293 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 SAMD15Q9P1V8 674 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 SURF6O75683 361 aaKnown RBP6.28□□□□□ -1.4
XRN1-201ENST00000264951 STRN4Q9NRL3 753 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 CYLC1P35663 651 aaPredicted RBP6.28□□□□□ -1.4
XRN1-201ENST00000264951 TRIM7Q9C029 511 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 BCL11BQ9C0K0 894 aaPredicted RBP6.28□□□□□ -1.4
XRN1-201ENST00000264951 RABGAP1Q9Y3P9 1069 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 CTAGE15A4D2H0 777 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 CTAGE8P0CG41 777 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 CTAGE6Q86UF2 777 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 CTAGE4Q8IX94 777 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 DNAJC8O75937 253 aaPredicted RBP6.28□□□□□ -1.4
XRN1-201ENST00000264951 GABPB1Q06547 395 aaPredicted RBP6.28□□□□□ -1.4
XRN1-201ENST00000264951 TRPC3Q13507 836 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 NCAPGQ9BPX3 1015 aa6.28□□□□□ -1.4
XRN1-201ENST00000264951 CCDC178Q5BJE1 867 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 CCDC94Q9BW85 323 aaPredicted RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 PDRG1Q9NUG6 133 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 MAATS1Q7Z4T9 603 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 RPUSD2Q8IZ73 545 aaKnown RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 RAB11FIP3O75154 756 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 KLHL10Q6JEL2 608 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 SMAP1Q8IYB5 467 aaPredicted RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 STMN2Q93045 179 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 MPHOSPH10O00566 681 aaKnown RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 MGEA5O60502 916 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 ZNF853P0CG23 659 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 NBPF11Q86T75 865 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 A0A1W2PRG0 241 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 CCDC27Q2M243 656 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 NUP88Q99567 741 aaPredicted RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 DHX57Q6P158 1386 aaKnown RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 CCDC129Q6ZRS4 1044 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 FAM177A1Q8N128 213 aaPredicted RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 CTNNBL1Q8WYA6 563 aaPredicted RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 FERMT2Q96AC1 680 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 RNF41Q9H4P4 317 aaPredicted RBP6.27□□□□□ -1.41
XRN1-201ENST00000264951 ERCC6Q03468 1493 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 ATP11AP98196 1134 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 KLHL40Q2TBA0 621 aa6.27□□□□□ -1.41
XRN1-201ENST00000264951 CIB2O75838 187 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 KRT83P78385 493 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 CEP120Q8N960 986 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 VAV2P52735 878 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 SEC63Q9UGP8 760 aaKnown RBP6.26□□□□□ -1.41
XRN1-201ENST00000264951 MYOM3Q5VTT5 1437 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.26□□□□□ -1.417e-7■□□□□ 10.3
XRN1-201ENST00000264951 ZSCAN16Q9H4T2 348 aaPredicted RBP6.26□□□□□ -1.41
XRN1-201ENST00000264951 THEGQ9P2T0 379 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 MTRF1LQ9UGC7 380 aaKnown RBP6.26□□□□□ -1.41
XRN1-201ENST00000264951 FYCO1Q9BQS8 1478 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 A0A087WZG4 1122 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 KIF5AQ12840 1032 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 KIF6Q6ZMV9 814 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.26□□□□□ -1.41
XRN1-201ENST00000264951 BUB1BO60566 1050 aaPredicted RBP6.26□□□□□ -1.41
XRN1-201ENST00000264951 RASSF2P50749 326 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 WHAMMP3Q1A5X7 153 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 CWC25Q9NXE8 425 aaPredicted RBP6.26□□□□□ -1.41
XRN1-201ENST00000264951 CFAP58Q5T655 872 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 RRP7AQ9Y3A4 280 aaKnown RBP6.26□□□□□ -1.41
XRN1-201ENST00000264951 GBP1P32455 592 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 ZBTB16Q05516 673 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 GOPCQ9HD26 462 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 CCDC88BA6NC98 1476 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 WDHD1O75717 1129 aaPredicted RBP6.26□□□□□ -1.41
XRN1-201ENST00000264951 EIF2S2P20042 333 aaKnown RBP6.26□□□□□ -1.41
XRN1-201ENST00000264951 COMMD10Q9Y6G5 202 aa6.26□□□□□ -1.41
XRN1-201ENST00000264951 CCDC160A6NGH7 325 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 GLRX3O76003 335 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms