RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TMX3Q96JJ7 454 aa13.62□□□□□ -0.23
DNMT3A-201ENST00000264709 TRPM1Q7Z4N2 1603 aa13.62□□□□□ -0.23
DNMT3A-201ENST00000264709 ERICH2A1L162 156 aa13.62□□□□□ -0.23
DNMT3A-201ENST00000264709 GGNBP2Q9H3C7 697 aa13.62□□□□□ -0.23
DNMT3A-201ENST00000264709 CFAP100Q494V2 611 aa13.61□□□□□ -0.23
DNMT3A-201ENST00000264709 JAKMIP1Q96N16 626 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-201ENST00000264709 SKILP12757 684 aa13.61□□□□□ -0.23
DNMT3A-201ENST00000264709 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
DNMT3A-201ENST00000264709 G3V3G9 751 aa13.61□□□□□ -0.23
DNMT3A-201ENST00000264709 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
DNMT3A-201ENST00000264709 TRIM22Q8IYM9 498 aa13.61□□□□□ -0.23
DNMT3A-201ENST00000264709 BCORL1Q5H9F3 1711 aa13.61□□□□□ -0.23
DNMT3A-201ENST00000264709 HMOX1P09601 288 aa13.6□□□□□ -0.23
DNMT3A-201ENST00000264709 GOLGA6L10A0A0M3HER8 536 aa13.6□□□□□ -0.23
DNMT3A-201ENST00000264709 TOP1P11387 765 aaKnown RBP13.6□□□□□ -0.23
DNMT3A-201ENST00000264709 ZRSR2Q15696 482 aaKnown RBP13.6□□□□□ -0.23
DNMT3A-201ENST00000264709 KDM4AO75164 1064 aa13.6□□□□□ -0.23
DNMT3A-201ENST00000264709 CASQ1P31415 396 aa13.6□□□□□ -0.23
DNMT3A-201ENST00000264709 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
DNMT3A-201ENST00000264709 ANKRD44Q8N8A2 993 aa13.59□□□□□ -0.23
DNMT3A-201ENST00000264709 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
DNMT3A-201ENST00000264709 MKRN1Q9UHC7 482 aaKnown RBP13.59□□□□□ -0.23
DNMT3A-201ENST00000264709 TCEAL9Q9UHQ7 104 aa13.59□□□□□ -0.23
DNMT3A-201ENST00000264709 GTF2F1P35269 517 aaKnown RBP eCLIP13.58□□□□□ -0.23
DNMT3A-201ENST00000264709 PYM1Q9BRP8 204 aaKnown RBP13.58□□□□□ -0.23
DNMT3A-201ENST00000264709 CCDC91Q7Z6B0 441 aa13.58□□□□□ -0.24
DNMT3A-201ENST00000264709 SKAP1Q86WV1 359 aa13.58□□□□□ -0.24
DNMT3A-201ENST00000264709 CTCFLQ8NI51 663 aaPredicted RBP13.58□□□□□ -0.24
DNMT3A-201ENST00000264709 MAGEC2Q9UBF1 373 aaPredicted RBP13.58□□□□□ -0.24
DNMT3A-201ENST00000264709 SYCP2Q9BX26 1530 aa13.58□□□□□ -0.24
DNMT3A-201ENST00000264709 CEP131Q9UPN4 1083 aa13.58□□□□□ -0.24
DNMT3A-201ENST00000264709 SOX12O15370 315 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 PHAXQ9H814 394 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 MARCH6O60337 910 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 TYRO3Q06418 890 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 ADCY10Q96PN6 1610 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 F13A1P00488 732 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 PCMTD1Q96MG8 357 aaPredicted RBP13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 A2MP01023 1474 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 NFXL1Q6ZNB6 911 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 URB2Q14146 1524 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-201ENST00000264709 GTF2A1P52655 376 aaPredicted RBP13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 PIP4K2BP78356 416 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 SMARCC1Q92922 1105 aaPredicted RBP13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 ZNF521Q96K83 1311 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 IMPACTQ9P2X3 320 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 HDGFL1Q5TGJ6 251 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 CEP112Q8N8E3 955 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 KCNG4Q8TDN1 519 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 SDSP20132 328 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 KANK3Q6NY19 840 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 CLEC17AQ6ZS10 378 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
DNMT3A-201ENST00000264709 TTC41PQ6P2S7 1318 aa13.55□□□□□ -0.24
DNMT3A-201ENST00000264709 KDM5BQ9UGL1 1544 aa13.55□□□□□ -0.24
DNMT3A-201ENST00000264709 USP26Q9BXU7 913 aa13.55□□□□□ -0.24
DNMT3A-201ENST00000264709 TTC12Q9H892 705 aaPredicted RBP13.55□□□□□ -0.24
DNMT3A-201ENST00000264709 PPM1EQ8WY54 764 aa13.55□□□□□ -0.24
DNMT3A-201ENST00000264709 EVI5LQ96CN4 794 aa13.55□□□□□ -0.24
DNMT3A-201ENST00000264709 TRAPPC8Q9Y2L5 1435 aa13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 CTAGE1Q96RT6 745 aa13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 GOLGA1Q92805 767 aa13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 SPDYE4A6NLX3 237 aa13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 LMAN1P49257 510 aa13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 CCDC181Q5TID7 509 aa13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 LMBRD1Q9NUN5 540 aa13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 RAD50Q92878 1312 aa13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 CKAP4Q07065 602 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 CWC27Q6UX04 472 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 ESYT1Q9BSJ8 1104 aa13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-201ENST00000264709 SEC24BO95487 1268 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 PDE1AP54750 535 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 CAMK4Q16566 473 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 RTEL1-TNFRSF6BF6WH68 1400 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 A0A1B0GUL7 405 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 URI1O94763 535 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 TOMM22Q9NS69 142 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 SLC3A2P08195 630 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 MNAT1P51948 309 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 STK11IPQ8N1F8 1099 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 VPS53Q5VIR6 699 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 ZSCAN25Q6NSZ9 544 aa13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 TRMT2AQ8IZ69 625 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-201ENST00000264709 E9PCH4 1651 aa13.52□□□□□ -0.24
DNMT3A-201ENST00000264709 GJB2P29033 226 aa13.52□□□□□ -0.24
DNMT3A-201ENST00000264709 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.25
DNMT3A-201ENST00000264709 SLC26A8Q96RN1 970 aa13.52□□□□□ -0.25
DNMT3A-201ENST00000264709 RBSNQ9H1K0 784 aa13.52□□□□□ -0.25
DNMT3A-201ENST00000264709 CKAP2LQ8IYA6 745 aa13.52□□□□□ -0.25
DNMT3A-201ENST00000264709 EBAG9O00559 213 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms