RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 C8orf37Q96NL8 207 aa10.5□□□□□ -0.73
COPS4-201ENST00000264389 CCDC9Q9Y3X0 531 aaKnown RBP10.5□□□□□ -0.73
COPS4-201ENST00000264389 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
COPS4-201ENST00000264389 SPATA31A5Q5VU36 1347 aa10.49□□□□□ -0.73
COPS4-201ENST00000264389 SPATA31A7Q8IWB4 1347 aa10.49□□□□□ -0.73
COPS4-201ENST00000264389 FMNL2Q96PY5 1086 aa10.49□□□□□ -0.73
COPS4-201ENST00000264389 ZBTB40Q9NUA8 1239 aa10.49□□□□□ -0.73
COPS4-201ENST00000264389 THSD7AQ9UPZ6 1657 aa10.49□□□□□ -0.73
COPS4-201ENST00000264389 BCL9LQ86UU0 1499 aa10.48□□□□□ -0.73
COPS4-201ENST00000264389 NUP188Q5SRE5 1749 aa10.48□□□□□ -0.73
COPS4-201ENST00000264389 SLC4A10Q6U841 1118 aa10.48□□□□□ -0.73
COPS4-201ENST00000264389 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
COPS4-201ENST00000264389 ZNF496Q96IT1 587 aaPredicted RBP10.48□□□□□ -0.73
COPS4-201ENST00000264389 NGLY1Q96IV0 654 aa10.48□□□□□ -0.73
COPS4-201ENST00000264389 RWDD1Q9H446 243 aaPredicted RBP10.48□□□□□ -0.73
COPS4-201ENST00000264389 DBF4Q9UBU7 674 aaPredicted RBP10.48□□□□□ -0.73
COPS4-201ENST00000264389 PRAMEF22A3QJZ6 481 aa10.47□□□□□ -0.73
COPS4-201ENST00000264389 F6X3S4 739 aa10.47□□□□□ -0.73
COPS4-201ENST00000264389 EXOC5O00471 708 aa10.47□□□□□ -0.73
COPS4-201ENST00000264389 ZBTB7BO15156 539 aaPredicted RBP10.47□□□□□ -0.73
COPS4-201ENST00000264389 IGHDP01880 384 aa10.47□□□□□ -0.73
COPS4-201ENST00000264389 HSPA1LP34931 641 aa10.47□□□□□ -0.73
COPS4-201ENST00000264389 CCT4P50991 539 aaKnown RBP10.47□□□□□ -0.73
COPS4-201ENST00000264389 TMOD3Q9NYL9 352 aa10.47□□□□□ -0.73
COPS4-201ENST00000264389 TJP1Q07157 1748 aa10.47□□□□□ -0.73
COPS4-201ENST00000264389 SNRPA1P09661 255 aaKnown RBP10.47□□□□□ -0.73
COPS4-201ENST00000264389 DDB1Q16531 1140 aa10.47□□□□□ -0.73
COPS4-201ENST00000264389 MEX3CQ5U5Q3 659 aaKnown RBP10.47□□□□□ -0.73
COPS4-201ENST00000264389 PHAXQ9H814 394 aaKnown RBP10.47□□□□□ -0.73
COPS4-201ENST00000264389 ANXA1P04083 346 aa10.46□□□□□ -0.74
COPS4-201ENST00000264389 HDAC1Q13547 482 aaPredicted RBP10.46□□□□□ -0.74
COPS4-201ENST00000264389 BARGINQ6ZT62 677 aa10.46□□□□□ -0.74
COPS4-201ENST00000264389 C1orf115Q9H7X2 142 aa10.46□□□□□ -0.74
COPS4-201ENST00000264389 CICQ96RK0 1608 aaPredicted RBP10.46□□□□□ -0.74
COPS4-201ENST00000264389 ATP10DQ9P241 1426 aa10.46□□□□□ -0.74
COPS4-201ENST00000264389 VPS72Q15906 364 aa10.45□□□□□ -0.74
COPS4-201ENST00000264389 DDX21Q9NR30 783 aaKnown RBP eCLIP10.45□□□□□ -0.74
COPS4-201ENST00000264389 HYPKQ9NX55 129 aa10.45□□□□□ -0.74
COPS4-201ENST00000264389 BCL9O00512 1426 aa10.45□□□□□ -0.74
COPS4-201ENST00000264389 ADCY9O60503 1353 aa10.45□□□□□ -0.74
COPS4-201ENST00000264389 PROSER3Q2NL68 480 aa10.44□□□□□ -0.74
COPS4-201ENST00000264389 FNBP4Q8N3X1 1017 aaPredicted RBP10.44□□□□□ -0.74
COPS4-201ENST00000264389 TSHZ2Q9NRE2 1034 aa10.44□□□□□ -0.74
COPS4-201ENST00000264389 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
COPS4-201ENST00000264389 MEIS3Q99687 375 aa10.44□□□□□ -0.74
COPS4-201ENST00000264389 USP21Q9UK80 565 aa10.44□□□□□ -0.74
COPS4-201ENST00000264389 SBF2Q86WG5 1849 aa10.44□□□□□ -0.74
COPS4-201ENST00000264389 ANKRD36CQ5JPF3 1778 aa10.43□□□□□ -0.74
COPS4-201ENST00000264389 DDX58O95786 925 aaKnown RBP10.43□□□□□ -0.74
COPS4-201ENST00000264389 POLA2Q14181 598 aa10.43□□□□□ -0.74
COPS4-201ENST00000264389 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
COPS4-201ENST00000264389 DNAAF4Q8WXU2 420 aa10.43□□□□□ -0.74
COPS4-201ENST00000264389 ERBB4Q15303 1308 aa10.43□□□□□ -0.74
COPS4-201ENST00000264389 BTAF1O14981 1849 aa10.43□□□□□ -0.74
COPS4-201ENST00000264389 COL5A3P25940 1745 aaPredicted RBP10.42□□□□□ -0.74
COPS4-201ENST00000264389 PI4KAP2A4QPH2 592 aa10.42□□□□□ -0.74
COPS4-201ENST00000264389 MYL6BP14649 208 aa10.42□□□□□ -0.74
COPS4-201ENST00000264389 RGS3P49796 1198 aa10.42□□□□□ -0.74
COPS4-201ENST00000264389 FAM98CQ17RN3 349 aaKnown RBP10.42□□□□□ -0.74
COPS4-201ENST00000264389 PI4KAP1Q8N8J0 262 aa10.42□□□□□ -0.74
COPS4-201ENST00000264389 PIGBQ92521 554 aa10.42□□□□□ -0.74
COPS4-201ENST00000264389 SYTL4Q96C24 671 aaPredicted RBP10.42□□□□□ -0.74
COPS4-201ENST00000264389 SRCIN1Q9C0H9 1055 aa10.42□□□□□ -0.74
COPS4-201ENST00000264389 USP16Q9Y5T5 823 aa10.42□□□□□ -0.74
COPS4-201ENST00000264389 ZNF831Q5JPB2 1677 aa10.42□□□□□ -0.74
COPS4-201ENST00000264389 A0A0G2JS52 829 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 PTCD1O75127 700 aaKnown RBP10.41□□□□□ -0.74
COPS4-201ENST00000264389 GNAI3P08754 354 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 MYT1Q01538 1121 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 PDIA6Q15084 440 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 KSR2Q6VAB6 950 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 AFF2P51816 1311 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 RREB1Q92766 1687 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 AIMP1Q12904 312 aaKnown RBP10.41□□□□□ -0.74
COPS4-201ENST00000264389 SMC5Q8IY18 1101 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 MARCH10Q8NA82 808 aaPredicted RBP10.41□□□□□ -0.74
COPS4-201ENST00000264389 PDZRN3Q9UPQ7 1066 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 MAP3K2Q9Y2U5 619 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 BRWD3Q6RI45 1802 aa10.41□□□□□ -0.74
COPS4-201ENST00000264389 ATRNO75882 1429 aa10.4□□□□□ -0.74
COPS4-201ENST00000264389 ABCB7O75027 752 aa10.4□□□□□ -0.74
COPS4-201ENST00000264389 GNAI2P04899 355 aa10.4□□□□□ -0.74
COPS4-201ENST00000264389 CEP85Q6P2H3 762 aa10.4□□□□□ -0.74
COPS4-201ENST00000264389 RPAP2Q8IXW5 612 aaPredicted RBP10.4□□□□□ -0.74
COPS4-201ENST00000264389 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
COPS4-201ENST00000264389 XAGE3Q8WTP9 111 aa10.4□□□□□ -0.74
COPS4-201ENST00000264389 GCC1Q96CN9 775 aa10.4□□□□□ -0.74
COPS4-201ENST00000264389 ATG3Q9NT62 314 aa10.4□□□□□ -0.74
COPS4-201ENST00000264389 ASAP1Q9ULH1 1129 aa10.4□□□□□ -0.74
COPS4-201ENST00000264389 UBTFL1P0CB47 393 aaPredicted RBP10.39□□□□□ -0.75
COPS4-201ENST00000264389 PIP4K2AP48426 406 aaPredicted RBP10.39□□□□□ -0.75
COPS4-201ENST00000264389 BEND3Q5T5X7 828 aa10.39□□□□□ -0.75
COPS4-201ENST00000264389 RIC3Q7Z5B4 369 aa10.39□□□□□ -0.75
COPS4-201ENST00000264389 VSIG10Q8N0Z9 540 aa10.39□□□□□ -0.75
COPS4-201ENST00000264389 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
COPS4-201ENST00000264389 NUP98P52948 1817 aa10.39□□□□□ -0.75
COPS4-201ENST00000264389 HMMRO75330 724 aa10.38□□□□□ -0.75
COPS4-201ENST00000264389 ALDH1L1O75891 902 aa10.38□□□□□ -0.75
COPS4-201ENST00000264389 PRIM1P49642 420 aaKnown RBP10.38□□□□□ -0.75
COPS4-201ENST00000264389 NEXNQ0ZGT2 675 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms