RNA–Protein interactions for RNA: ENST00000263774.8

NDUFS3-201, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFS3, Length 958 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-201ENST00000263774 TEX13AQ9BXU3 409 aaPredicted RBP28.44■■■□□ 2.14
NDUFS3-201ENST00000263774 TAF7Q15545 349 aaPredicted RBP28.42■■■□□ 2.14
NDUFS3-201ENST00000263774 CANXP27824 592 aaKnown RBP28.41■■■□□ 2.14
NDUFS3-201ENST00000263774 COL15A1P39059 1388 aa28.4■■■□□ 2.14
NDUFS3-201ENST00000263774 GPR162Q16538 588 aa28.4■■■□□ 2.14
NDUFS3-201ENST00000263774 FKBP8Q14318 412 aa28.39■■■□□ 2.14
NDUFS3-201ENST00000263774 WDR43Q15061 677 aaKnown RBP eCLIP28.39■■■□□ 2.14
NDUFS3-201ENST00000263774 ZPR1O75312 459 aa28.38■■■□□ 2.13
NDUFS3-201ENST00000263774 USPL1Q5W0Q7 1092 aa28.38■■■□□ 2.13
NDUFS3-201ENST00000263774 THUMPD2Q9BTF0 503 aaKnown RBP28.38■■■□□ 2.13
NDUFS3-201ENST00000263774 MIS18AQ9NYP9 233 aa28.38■■■□□ 2.13
NDUFS3-201ENST00000263774 EIF5P55010 431 aaKnown RBP28.37■■■□□ 2.13
NDUFS3-201ENST00000263774 PELP1Q8IZL8 1130 aaKnown RBP28.37■■■□□ 2.13
NDUFS3-201ENST00000263774 NARFQ9UHQ1 456 aa28.37■■■□□ 2.13
NDUFS3-201ENST00000263774 RIPK4P57078 832 aa28.36■■■□□ 2.13
NDUFS3-201ENST00000263774 CCDC146Q8IYE0 955 aa28.36■■■□□ 2.13
NDUFS3-201ENST00000263774 ADAMTS8Q9UP79 889 aa28.36■■■□□ 2.13
NDUFS3-201ENST00000263774 USP16Q9Y5T5 823 aa28.36■■■□□ 2.13
NDUFS3-201ENST00000263774 PARP3Q9Y6F1 533 aa28.36■■■□□ 2.13
NDUFS3-201ENST00000263774 PRAMEF22A3QJZ6 481 aa28.35■■■□□ 2.13
NDUFS3-201ENST00000263774 A1BGP04217 495 aa28.35■■■□□ 2.13
NDUFS3-201ENST00000263774 TMPOP42166 694 aaKnown RBP28.35■■■□□ 2.13
NDUFS3-201ENST00000263774 SNRPA1P09661 255 aaKnown RBP28.34■■■□□ 2.13
NDUFS3-201ENST00000263774 YY1P25490 414 aa28.34■■■□□ 2.13
NDUFS3-201ENST00000263774 PNISRQ8TF01 805 aaKnown RBP28.34■■■□□ 2.13
NDUFS3-201ENST00000263774 KDM3BQ7LBC6 1761 aa28.34■■■□□ 2.13
NDUFS3-201ENST00000263774 KIF13BQ9NQT8 1826 aa28.34■■■□□ 2.13
NDUFS3-201ENST00000263774 RUNDC1Q96C34 613 aa28.33■■■□□ 2.13
NDUFS3-201ENST00000263774 TM4SF1P30408 202 aa28.32■■■□□ 2.12
NDUFS3-201ENST00000263774 IL6STP40189 918 aaPredicted RBP28.32■■■□□ 2.12
NDUFS3-201ENST00000263774 DDR1Q08345 913 aa28.32■■■□□ 2.12
NDUFS3-201ENST00000263774 A0A087WZG4 1122 aa28.31■■■□□ 2.12
NDUFS3-201ENST00000263774 YBX3P16989 372 aaKnown RBP eCLIP28.31■■■□□ 2.127e-14■□□□□ 9.2
NDUFS3-201ENST00000263774 BCL2L12Q9HB09 334 aa28.31■■■□□ 2.12
NDUFS3-201ENST00000263774 C10orf71Q711Q0 1435 aa28.31■■■□□ 2.12
NDUFS3-201ENST00000263774 CHD4Q14839 1912 aa28.31■■■□□ 2.12
NDUFS3-201ENST00000263774 RRP7AQ9Y3A4 280 aaKnown RBP28.3■■■□□ 2.12
NDUFS3-201ENST00000263774 ZNF330Q9Y3S2 320 aaPredicted RBP28.3■■■□□ 2.12
NDUFS3-201ENST00000263774 UTRNP46939 3433 aa28.3■■■□□ 2.12
NDUFS3-201ENST00000263774 LMOD3Q0VAK6 560 aa28.29■■■□□ 2.12
NDUFS3-201ENST00000263774 KIAA1551Q9HCM1 1747 aa28.27■■■□□ 2.12
NDUFS3-201ENST00000263774 POLRMTO00411 1230 aaKnown RBP28.27■■■□□ 2.12
NDUFS3-201ENST00000263774 EIF4A1P60842 406 aaKnown RBP28.27■■■□□ 2.12
NDUFS3-201ENST00000263774 NFIXQ14938 502 aa28.27■■■□□ 2.12
NDUFS3-201ENST00000263774 NEUROD2Q15784 382 aa28.27■■■□□ 2.12
NDUFS3-201ENST00000263774 TBC1D2BQ9UPU7 963 aa28.27■■■□□ 2.12
NDUFS3-201ENST00000263774 PIP4K2AP48426 406 aaPredicted RBP28.26■■■□□ 2.11
NDUFS3-201ENST00000263774 TGFB2P61812 414 aa28.26■■■□□ 2.11
NDUFS3-201ENST00000263774 PXDNLA1KZ92 1463 aa28.26■■■□□ 2.11
NDUFS3-201ENST00000263774 GOLGB1Q14789 3259 aaKnown RBP28.25■■■□□ 2.11
NDUFS3-201ENST00000263774 N4BP2Q86UW6 1770 aaPredicted RBP28.25■■■□□ 2.11
NDUFS3-201ENST00000263774 GRIN3BO60391 1043 aa28.25■■■□□ 2.11
NDUFS3-201ENST00000263774 NPM2Q86SE8 214 aaKnown RBP28.25■■■□□ 2.11
NDUFS3-201ENST00000263774 WWC3Q9ULE0 1092 aa28.25■■■□□ 2.11
NDUFS3-201ENST00000263774 LAMB4A4D0S4 1761 aa28.24■■■□□ 2.11
NDUFS3-201ENST00000263774 SCN7AQ01118 1682 aa28.24■■■□□ 2.11
NDUFS3-201ENST00000263774 GIGYF1O75420 1035 aaPredicted RBP28.24■■■□□ 2.11
NDUFS3-201ENST00000263774 CCDC184Q52MB2 194 aa28.24■■■□□ 2.11
NDUFS3-201ENST00000263774 NBPF26B4DH59 902 aa28.23■■■□□ 2.11
NDUFS3-201ENST00000263774 NBPF10Q6P3W6 841 aaKnown RBP28.23■■■□□ 2.11
NDUFS3-201ENST00000263774 NBPF15Q8N660 670 aa28.23■■■□□ 2.11
NDUFS3-201ENST00000263774 TSPYL4Q9UJ04 414 aa28.23■■■□□ 2.11
NDUFS3-201ENST00000263774 TRIM35Q9UPQ4 493 aa28.23■■■□□ 2.11
NDUFS3-201ENST00000263774 AFDNP55196 1824 aaKnown RBP28.22■■■□□ 2.11
NDUFS3-201ENST00000263774 A0A0G2JLW4 131 aa28.22■■■□□ 2.11
NDUFS3-201ENST00000263774 BABAM1Q9NWV8 329 aa28.21■■■□□ 2.11
NDUFS3-201ENST00000263774 CAMTA2O94983 1202 aa28.2■■■□□ 2.1
NDUFS3-201ENST00000263774 DPEP1P16444 411 aa28.2■■■□□ 2.1
NDUFS3-201ENST00000263774 DZIP3Q86Y13 1208 aaKnown RBP28.2■■■□□ 2.1
NDUFS3-201ENST00000263774 NRXN2Q9P2S2 1712 aa28.2■■■□□ 2.1
NDUFS3-201ENST00000263774 ANP32CO43423 234 aa28.19■■■□□ 2.1
NDUFS3-201ENST00000263774 SERPINB2P05120 415 aa28.19■■■□□ 2.1
NDUFS3-201ENST00000263774 TBC1D9BQ66K14 1250 aa28.19■■■□□ 2.1
NDUFS3-201ENST00000263774 BICDL1Q6ZP65 573 aa28.19■■■□□ 2.1
NDUFS3-201ENST00000263774 BCORQ6W2J9 1755 aa28.19■■■□□ 2.1
NDUFS3-201ENST00000263774 KCNA3P22001 575 aa28.16■■■□□ 2.1
NDUFS3-201ENST00000263774 BRCA1P38398 1863 aaKnown RBP28.16■■■□□ 2.1
NDUFS3-201ENST00000263774 APAF1O14727 1248 aa28.15■■■□□ 2.1
NDUFS3-201ENST00000263774 CHL1O00533 1208 aa28.14■■■□□ 2.1
NDUFS3-201ENST00000263774 CHRNA5P30532 468 aa28.12■■■□□ 2.09
NDUFS3-201ENST00000263774 CLEC4GQ6UXB4 293 aa28.12■■■□□ 2.09
NDUFS3-201ENST00000263774 BCS1LQ9Y276 419 aa28.12■■■□□ 2.09
NDUFS3-201ENST00000263774 SETDB2Q96T68 719 aa28.11■■■□□ 2.09
NDUFS3-201ENST00000263774 LAS1LQ9Y4W2 734 aaKnown RBP28.11■■■□□ 2.09
NDUFS3-201ENST00000263774 CARMIL3Q8ND23 1372 aa28.11■■■□□ 2.09
NDUFS3-201ENST00000263774 MRS2Q9HD23 443 aa28.1■■■□□ 2.09
NDUFS3-201ENST00000263774 NGEFQ8N5V2 710 aa28.09■■■□□ 2.09
NDUFS3-201ENST00000263774 PIM2Q9P1W9 311 aa28.09■■■□□ 2.09
NDUFS3-201ENST00000263774 ZNF652Q9Y2D9 606 aa28.09■■■□□ 2.09
NDUFS3-201ENST00000263774 RGL2O15211 777 aa28.08■■■□□ 2.09
NDUFS3-201ENST00000263774 ZNF784Q8NCA9 323 aaPredicted RBP28.08■■■□□ 2.09
NDUFS3-201ENST00000263774 ERBB4Q15303 1308 aa28.08■■■□□ 2.09
NDUFS3-201ENST00000263774 MYL6BP14649 208 aa28.07■■■□□ 2.08
NDUFS3-201ENST00000263774 EIF2S2P20042 333 aaKnown RBP28.07■■■□□ 2.08
NDUFS3-201ENST00000263774 PRR5LQ6MZQ0 368 aa28.07■■■□□ 2.08
NDUFS3-201ENST00000263774 CFAP44Q96MT7 982 aa28.06■■■□□ 2.08
NDUFS3-201ENST00000263774 ARFGEF1Q9Y6D6 1849 aa28.06■■■□□ 2.08
NDUFS3-201ENST00000263774 ANKRD31Q8N7Z5 1873 aa28.06■■■□□ 2.08
NDUFS3-201ENST00000263774 HLFQ16534 295 aa28.05■■■□□ 2.08
NDUFS3-201ENST00000263774 KRT24Q2M2I5 525 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms