RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 USP16Q9Y5T5 823 aa12.51□□□□□ -0.41
SNRNP40-201ENST00000263694 ANXA1P04083 346 aa12.5□□□□□ -0.41
SNRNP40-201ENST00000263694 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
SNRNP40-201ENST00000263694 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
SNRNP40-201ENST00000263694 SLC4A9Q96Q91 983 aa12.5□□□□□ -0.41
SNRNP40-201ENST00000263694 NOB1Q9ULX3 412 aaKnown RBP12.5□□□□□ -0.41
SNRNP40-201ENST00000263694 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
SNRNP40-201ENST00000263694 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
SNRNP40-201ENST00000263694 G2E3Q7L622 706 aa12.49□□□□□ -0.41
SNRNP40-201ENST00000263694 BTAF1O14981 1849 aa12.49□□□□□ -0.41
SNRNP40-201ENST00000263694 CCDC30Q5VVM6 783 aa12.48□□□□□ -0.41
SNRNP40-201ENST00000263694 ZNF428Q96B54 188 aa12.48□□□□□ -0.41
SNRNP40-201ENST00000263694 CHPF2Q9P2E5 772 aa12.48□□□□□ -0.41
SNRNP40-201ENST00000263694 NHSQ6T4R5 1651 aa12.48□□□□□ -0.41
SNRNP40-201ENST00000263694 TRIM37O94972 964 aa12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 CANXP27824 592 aaKnown RBP12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 KCNQ4P56696 695 aa12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 FKBP8Q14318 412 aa12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 FAM196AQ6ZSG2 479 aa12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 DNAJC10Q8IXB1 793 aa12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 CLUAP1Q96AJ1 413 aa12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 HOXB7P09629 217 aa12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 PHAXQ9H814 394 aaKnown RBP12.47□□□□□ -0.41
SNRNP40-201ENST00000263694 PALLDQ8WX93 1383 aa12.46□□□□□ -0.41
SNRNP40-201ENST00000263694 A1BGP04217 495 aa12.46□□□□□ -0.42
SNRNP40-201ENST00000263694 PANK1Q8TE04 598 aa12.46□□□□□ -0.42
SNRNP40-201ENST00000263694 STK31Q9BXU1 1019 aa12.46□□□□□ -0.42
SNRNP40-201ENST00000263694 SOS1Q07889 1333 aaPredicted RBP12.46□□□□□ -0.42
SNRNP40-201ENST00000263694 NEFLP07196 543 aa12.45□□□□□ -0.42
SNRNP40-201ENST00000263694 RLBP1P12271 317 aa12.45□□□□□ -0.42
SNRNP40-201ENST00000263694 MYL6BP14649 208 aa12.45□□□□□ -0.42
SNRNP40-201ENST00000263694 PDIA6Q15084 440 aa12.45□□□□□ -0.42
SNRNP40-201ENST00000263694 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
SNRNP40-201ENST00000263694 EP400Q96L91 3159 aa12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 LAMB4A4D0S4 1761 aa12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 TRIM27P14373 513 aa12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 SIK1P57059 783 aa12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 ITPK1Q13572 414 aa12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 BCL11BQ9C0K0 894 aaPredicted RBP12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 TJP1Q07157 1748 aa12.44□□□□□ -0.42
SNRNP40-201ENST00000263694 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 NBPF14Q5TI25 921 aa12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 SMARCC1Q92922 1105 aaPredicted RBP12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 KIF16BQ96L93 1317 aa12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 F6X3S4 739 aa12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 ATF7IPQ6VMQ6 1270 aa12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 EXOC6Q8TAG9 804 aa12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 DBF4Q9UBU7 674 aaPredicted RBP12.43□□□□□ -0.42
SNRNP40-201ENST00000263694 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
SNRNP40-201ENST00000263694 CYP19A1P11511 503 aaPredicted RBP12.42□□□□□ -0.42
SNRNP40-201ENST00000263694 AIMP1Q12904 312 aaKnown RBP12.42□□□□□ -0.42
SNRNP40-201ENST00000263694 FLIIQ13045 1269 aa12.42□□□□□ -0.42
SNRNP40-201ENST00000263694 DDX21Q9NR30 783 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNRNP40-201ENST00000263694 COG6Q9Y2V7 657 aa12.42□□□□□ -0.42
SNRNP40-201ENST00000263694 FKBP5Q13451 457 aaPredicted RBP12.41□□□□□ -0.42
SNRNP40-201ENST00000263694 LRP10Q7Z4F1 713 aa12.41□□□□□ -0.42
SNRNP40-201ENST00000263694 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
SNRNP40-201ENST00000263694 MYH14Q7Z406 1995 aaKnown RBP12.41□□□□□ -0.42
SNRNP40-201ENST00000263694 FTSJ3Q8IY81 847 aaKnown RBP12.4□□□□□ -0.42
SNRNP40-201ENST00000263694 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
SNRNP40-201ENST00000263694 TMEM57Q8N5G2 664 aa12.4□□□□□ -0.42
SNRNP40-201ENST00000263694 LINC00116Q8NCU8 138 aa12.4□□□□□ -0.42
SNRNP40-201ENST00000263694 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.42
SNRNP40-201ENST00000263694 ARHGAP45Q92619 1136 aa12.4□□□□□ -0.42
SNRNP40-201ENST00000263694 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
SNRNP40-201ENST00000263694 HYPKQ9NX55 129 aa12.4□□□□□ -0.42
SNRNP40-201ENST00000263694 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
SNRNP40-201ENST00000263694 STARD3NLO95772 234 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 PDE3AQ14432 1141 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 COPS6Q7L5N1 327 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 CHMP4AQ9BY43 222 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 CCNL1Q9UK58 526 aaPredicted RBP12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 ZBTB1Q9Y2K1 713 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 LY75O60449 1722 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 APBA3O96018 575 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 PTPRCP08575 1304 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 CRKLP46109 303 aaKnown RBP12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 SLC4A10Q6U841 1118 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 SMIM5Q71RC9 77 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 API5Q9BZZ5 524 aaKnown RBP12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 LRRC4BQ9NT99 713 aa12.39□□□□□ -0.43
SNRNP40-201ENST00000263694 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
SNRNP40-201ENST00000263694 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
SNRNP40-201ENST00000263694 COL5A3P25940 1745 aaPredicted RBP12.37□□□□□ -0.43
SNRNP40-201ENST00000263694 ADCY9O60503 1353 aa12.37□□□□□ -0.43
SNRNP40-201ENST00000263694 ABCC4O15439 1325 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms