RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 USP16Q9Y5T5 823 aa19.75■□□□□ 0.75
VPS26A-201ENST00000263559 ADAMTS2O95450 1211 aa19.74■□□□□ 0.75
VPS26A-201ENST00000263559 KSR2Q6VAB6 950 aa19.73■□□□□ 0.75
VPS26A-201ENST00000263559 MAP3K2Q9Y2U5 619 aa19.73■□□□□ 0.75
VPS26A-201ENST00000263559 HMMRO75330 724 aa19.73■□□□□ 0.75
VPS26A-201ENST00000263559 LRRFIP2Q9Y608 721 aaKnown RBP19.73■□□□□ 0.75
VPS26A-201ENST00000263559 SEC24BO95487 1268 aa19.72■□□□□ 0.75
VPS26A-201ENST00000263559 UBTFL1P0CB47 393 aaPredicted RBP19.72■□□□□ 0.75
VPS26A-201ENST00000263559 PLCH1Q4KWH8 1693 aa19.72■□□□□ 0.75
VPS26A-201ENST00000263559 MYL6BP14649 208 aa19.72■□□□□ 0.75
VPS26A-201ENST00000263559 AIMP1Q12904 312 aaKnown RBP19.72■□□□□ 0.75
VPS26A-201ENST00000263559 GLI3P10071 1580 aa19.72■□□□□ 0.75
VPS26A-201ENST00000263559 DISP2A7MBM2 1401 aa19.72■□□□□ 0.75
VPS26A-201ENST00000263559 IPO9Q96P70 1041 aaKnown RBP19.71■□□□□ 0.75
VPS26A-201ENST00000263559 TOGARAM1Q9Y4F4 1720 aa19.71■□□□□ 0.75
VPS26A-201ENST00000263559 ATP8B2P98198 1209 aa19.71■□□□□ 0.75
VPS26A-201ENST00000263559 UBR2Q8IWV8 1755 aa19.7■□□□□ 0.74
VPS26A-201ENST00000263559 PNMA6EA0A0J9YXQ4 647 aa19.7■□□□□ 0.74
VPS26A-201ENST00000263559 NUTM2BA6NNL0 878 aaPredicted RBP19.69■□□□□ 0.74
VPS26A-201ENST00000263559 NUTM2EB1AL46 878 aaPredicted RBP19.69■□□□□ 0.74
VPS26A-201ENST00000263559 NBPF7P0C2Y1 421 aaPredicted RBP19.69■□□□□ 0.74
VPS26A-201ENST00000263559 NUTM2AQ8IVF1 878 aaPredicted RBP19.69■□□□□ 0.74
VPS26A-201ENST00000263559 DDX58O95786 925 aaKnown RBP19.69■□□□□ 0.74
VPS26A-201ENST00000263559 PAPPAQ13219 1627 aa19.69■□□□□ 0.74
VPS26A-201ENST00000263559 LAMB4A4D0S4 1761 aa19.69■□□□□ 0.74
VPS26A-201ENST00000263559 UBAP1LF5GYI3 381 aa19.69■□□□□ 0.74
VPS26A-201ENST00000263559 APBB1O00213 710 aa19.69■□□□□ 0.74
VPS26A-201ENST00000263559 PIP4K2AP48426 406 aaPredicted RBP19.69■□□□□ 0.74
VPS26A-201ENST00000263559 LRP10Q7Z4F1 713 aa19.68■□□□□ 0.74
VPS26A-201ENST00000263559 COPS6Q7L5N1 327 aa19.68■□□□□ 0.74
VPS26A-201ENST00000263559 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
VPS26A-201ENST00000263559 XAGE3Q8WTP9 111 aa19.68■□□□□ 0.74
VPS26A-201ENST00000263559 ZBTB47Q9UFB7 747 aaPredicted RBP19.68■□□□□ 0.74
VPS26A-201ENST00000263559 SMARCA5O60264 1052 aaPredicted RBP19.67■□□□□ 0.74
VPS26A-201ENST00000263559 ALDH1L1O75891 902 aa19.67■□□□□ 0.74
VPS26A-201ENST00000263559 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
VPS26A-201ENST00000263559 KCPQ6ZWJ8 1503 aa19.67■□□□□ 0.74
VPS26A-201ENST00000263559 CWF19L2Q2TBE0 894 aaKnown RBP19.67■□□□□ 0.74
VPS26A-201ENST00000263559 NRAPQ86VF7 1730 aa19.67■□□□□ 0.74
VPS26A-201ENST00000263559 TMOD3Q9NYL9 352 aa19.66■□□□□ 0.74
VPS26A-201ENST00000263559 WNK3Q9BYP7 1800 aa19.66■□□□□ 0.74
VPS26A-201ENST00000263559 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
VPS26A-201ENST00000263559 RIC3Q7Z5B4 369 aa19.66■□□□□ 0.74
VPS26A-201ENST00000263559 PLEKHM2Q8IWE5 1019 aa19.66■□□□□ 0.74
VPS26A-201ENST00000263559 EXOC5O00471 708 aa19.65■□□□□ 0.74
VPS26A-201ENST00000263559 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
VPS26A-201ENST00000263559 EXOC6BQ9Y2D4 811 aa19.65■□□□□ 0.74
VPS26A-201ENST00000263559 LINS1Q8NG48 757 aa19.65■□□□□ 0.74
VPS26A-201ENST00000263559 ITGB4P16144 1822 aa19.65■□□□□ 0.74
VPS26A-201ENST00000263559 TNS2Q63HR2 1409 aa19.64■□□□□ 0.73
VPS26A-201ENST00000263559 C9orf78Q9NZ63 289 aaPredicted RBP19.64■□□□□ 0.73
VPS26A-201ENST00000263559 PPP1R42Q7Z4L9 355 aa19.63■□□□□ 0.73
VPS26A-201ENST00000263559 OTUD7AQ8TE49 926 aaPredicted RBP19.63■□□□□ 0.73
VPS26A-201ENST00000263559 SSH3Q8TE77 659 aa19.63■□□□□ 0.73
VPS26A-201ENST00000263559 PIGBQ92521 554 aa19.63■□□□□ 0.73
VPS26A-201ENST00000263559 SPATA31A1Q5TZJ5 1347 aa19.63■□□□□ 0.73
VPS26A-201ENST00000263559 ANKRD13DQ6ZTN6 518 aa19.63■□□□□ 0.73
VPS26A-201ENST00000263559 KAT6BQ8WYB5 2073 aa19.63■□□□□ 0.73
VPS26A-201ENST00000263559 NBPF26B4DH59 902 aa19.62■□□□□ 0.73
VPS26A-201ENST00000263559 IGKV5-2P06315 115 aa19.62■□□□□ 0.73
VPS26A-201ENST00000263559 NBPF14Q5TI25 921 aa19.62■□□□□ 0.73
VPS26A-201ENST00000263559 NBPF10Q6P3W6 841 aaKnown RBP19.62■□□□□ 0.73
VPS26A-201ENST00000263559 NBPF15Q8N660 670 aa19.62■□□□□ 0.73
VPS26A-201ENST00000263559 METTL22Q9BUU2 404 aaPredicted RBP19.61■□□□□ 0.73
VPS26A-201ENST00000263559 POLA2Q14181 598 aa19.61■□□□□ 0.73
VPS26A-201ENST00000263559 ASAP1Q9ULH1 1129 aa19.61■□□□□ 0.73
VPS26A-201ENST00000263559 ERBB4Q15303 1308 aa19.61■□□□□ 0.73
VPS26A-201ENST00000263559 THRAP3Q9Y2W1 955 aaKnown RBP19.6■□□□□ 0.73
VPS26A-201ENST00000263559 NWD2Q9ULI1 1742 aa19.6■□□□□ 0.73
VPS26A-201ENST00000263559 IBTKQ9P2D0 1353 aaPredicted RBP19.6■□□□□ 0.73
VPS26A-201ENST00000263559 SRGAP3O43295 1099 aa19.6■□□□□ 0.73
VPS26A-201ENST00000263559 NEXNQ0ZGT2 675 aa19.6■□□□□ 0.73
VPS26A-201ENST00000263559 MYD88Q99836 296 aa19.6■□□□□ 0.73
VPS26A-201ENST00000263559 NOP58Q9Y2X3 529 aaKnown RBP19.6■□□□□ 0.73
VPS26A-201ENST00000263559 GRM8O00222 908 aa19.59■□□□□ 0.73
VPS26A-201ENST00000263559 A1BGP04217 495 aa19.59■□□□□ 0.73
VPS26A-201ENST00000263559 CDCA7Q9BWT1 371 aaPredicted RBP19.59■□□□□ 0.73
VPS26A-201ENST00000263559 LRRCC1Q9C099 1032 aa19.59■□□□□ 0.73
VPS26A-201ENST00000263559 SLIT2O94813 1529 aa19.59■□□□□ 0.73
VPS26A-201ENST00000263559 GSPT1P15170 499 aaKnown RBP19.59■□□□□ 0.73
VPS26A-201ENST00000263559 ATG3Q9NT62 314 aa19.59■□□□□ 0.73
VPS26A-201ENST00000263559 UTYO14607 1347 aa19.59■□□□□ 0.73
VPS26A-201ENST00000263559 ARFGEF2Q9Y6D5 1785 aa19.59■□□□□ 0.73
VPS26A-201ENST00000263559 NEURL1BA8MQ27 555 aa19.59■□□□□ 0.73
VPS26A-201ENST00000263559 UPF2Q9HAU5 1272 aaKnown RBP19.59■□□□□ 0.73
VPS26A-201ENST00000263559 DDRGK1Q96HY6 314 aa19.58■□□□□ 0.73
VPS26A-201ENST00000263559 SPATA31A5Q5VU36 1347 aa19.58■□□□□ 0.72
VPS26A-201ENST00000263559 SPATA31A7Q8IWB4 1347 aa19.58■□□□□ 0.72
VPS26A-201ENST00000263559 LRP6O75581 1613 aa19.58■□□□□ 0.72
VPS26A-201ENST00000263559 TTC22Q5TAA0 569 aa19.58■□□□□ 0.72
VPS26A-201ENST00000263559 HDAC5Q9UQL6 1122 aa19.57■□□□□ 0.72
VPS26A-201ENST00000263559 BCL9O00512 1426 aa19.57■□□□□ 0.72
VPS26A-201ENST00000263559 SURF6O75683 361 aaKnown RBP19.57■□□□□ 0.72
VPS26A-201ENST00000263559 MTX1Q13505 466 aa19.57■□□□□ 0.72
VPS26A-201ENST00000263559 PLBD2Q8NHP8 589 aa19.57■□□□□ 0.72
VPS26A-201ENST00000263559 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
VPS26A-201ENST00000263559 MFAP1P55081 439 aaKnown RBP19.56■□□□□ 0.72
VPS26A-201ENST00000263559 GCKRQ14397 625 aa19.56■□□□□ 0.72
VPS26A-201ENST00000263559 DDB1Q16531 1140 aa19.56■□□□□ 0.72
VPS26A-201ENST00000263559 SUCLG2Q96I99 432 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms