RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 SYTL4Q96C24 671 aaPredicted RBP11.62□□□□□ -0.55
SIM1-201ENST00000262901 BTBD11A6QL63 1104 aa11.62□□□□□ -0.55
SIM1-201ENST00000262901 EIF2S2P20042 333 aaKnown RBP11.62□□□□□ -0.55
SIM1-201ENST00000262901 PDE3AQ14432 1141 aa11.62□□□□□ -0.55
SIM1-201ENST00000262901 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
SIM1-201ENST00000262901 CDCA7Q9BWT1 371 aaPredicted RBP11.62□□□□□ -0.55
SIM1-201ENST00000262901 PTMSP20962 102 aa11.62□□□□□ -0.55
SIM1-201ENST00000262901 CHMP3Q9Y3E7 222 aa11.62□□□□□ -0.55
SIM1-201ENST00000262901 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
SIM1-201ENST00000262901 KIAA2012Q0VF49 1180 aa11.61□□□□□ -0.55
SIM1-201ENST00000262901 NRKQ7Z2Y5 1582 aa11.61□□□□□ -0.55
SIM1-201ENST00000262901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.61□□□□□ -0.55
SIM1-201ENST00000262901 PCDH11XQ9BZA7 1347 aa11.61□□□□□ -0.55
SIM1-201ENST00000262901 PCDH11YQ9BZA8 1340 aa11.61□□□□□ -0.55
SIM1-201ENST00000262901 LTBP4Q8N2S1 1624 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 DMTNQ08495 405 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 CHAF1AQ13111 956 aaPredicted RBP11.6□□□□□ -0.55
SIM1-201ENST00000262901 MBIPQ9NS73 344 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 MIS18AQ9NYP9 233 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 SPATA31A6Q5VVP1 1343 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 CLGNO14967 610 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 HSPA1LP34931 641 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
SIM1-201ENST00000262901 NOB1Q9ULX3 412 aaKnown RBP11.6□□□□□ -0.55
SIM1-201ENST00000262901 KDRP35968 1356 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 SYAP1Q96A49 352 aaPredicted RBP11.6□□□□□ -0.55
SIM1-201ENST00000262901 ANO2Q9NQ90 1003 aa11.6□□□□□ -0.55
SIM1-201ENST00000262901 SLIT3O75094 1523 aa11.59□□□□□ -0.55
SIM1-201ENST00000262901 FKBP5Q13451 457 aaPredicted RBP11.59□□□□□ -0.55
SIM1-201ENST00000262901 DDB1Q16531 1140 aa11.59□□□□□ -0.55
SIM1-201ENST00000262901 DCAF5Q96JK2 942 aa11.59□□□□□ -0.55
SIM1-201ENST00000262901 USP21Q9UK80 565 aa11.59□□□□□ -0.55
SIM1-201ENST00000262901 PLCD4Q9BRC7 762 aa11.59□□□□□ -0.55
SIM1-201ENST00000262901 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
SIM1-201ENST00000262901 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.56
SIM1-201ENST00000262901 TRAK2O60296 914 aa11.58□□□□□ -0.56
SIM1-201ENST00000262901 CCDC30Q5VVM6 783 aa11.58□□□□□ -0.56
SIM1-201ENST00000262901 MCTP1Q6DN14 999 aa11.58□□□□□ -0.56
SIM1-201ENST00000262901 EP400NLQ6ZTU2 488 aa11.58□□□□□ -0.56
SIM1-201ENST00000262901 MPNDQ8N594 471 aa11.58□□□□□ -0.56
SIM1-201ENST00000262901 TMOD3Q9NYL9 352 aa11.58□□□□□ -0.56
SIM1-201ENST00000262901 NFAT5O94916 1531 aa11.57□□□□□ -0.56
SIM1-201ENST00000262901 IQSEC2Q5JU85 1478 aa11.57□□□□□ -0.56
SIM1-201ENST00000262901 UTP14CQ5TAP6 766 aaKnown RBP11.57□□□□□ -0.56
SIM1-201ENST00000262901 BABAM1Q9NWV8 329 aa11.57□□□□□ -0.56
SIM1-201ENST00000262901 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
SIM1-201ENST00000262901 PHF23Q9BUL5 403 aaPredicted RBP11.57□□□□□ -0.56
SIM1-201ENST00000262901 ROBO1Q9Y6N7 1651 aa11.57□□□□□ -0.56
SIM1-201ENST00000262901 UNC5CLQ8IV45 518 aa11.56□□□□□ -0.56
SIM1-201ENST00000262901 REC8O95072 547 aa11.56□□□□□ -0.56
SIM1-201ENST00000262901 PHKG2P15735 406 aa11.56□□□□□ -0.56
SIM1-201ENST00000262901 RARSP54136 660 aaKnown RBP11.56□□□□□ -0.56
SIM1-201ENST00000262901 PRDM16Q9HAZ2 1276 aa11.56□□□□□ -0.56
SIM1-201ENST00000262901 CRB1P82279 1406 aa11.56□□□□□ -0.56
SIM1-201ENST00000262901 CHL1O00533 1208 aa11.56□□□□□ -0.56
SIM1-201ENST00000262901 ALDH1L2Q3SY69 923 aa11.56□□□□□ -0.56
SIM1-201ENST00000262901 SKOR2Q2VWA4 1001 aaPredicted RBP11.55□□□□□ -0.56
SIM1-201ENST00000262901 IL17REQ8NFR9 667 aa11.55□□□□□ -0.56
SIM1-201ENST00000262901 LGR6Q9HBX8 967 aa11.55□□□□□ -0.56
SIM1-201ENST00000262901 ATF7IPQ6VMQ6 1270 aa11.55□□□□□ -0.56
SIM1-201ENST00000262901 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
SIM1-201ENST00000262901 THRAP3Q9Y2W1 955 aaKnown RBP11.55□□□□□ -0.56
SIM1-201ENST00000262901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.54□□□□□ -0.56
SIM1-201ENST00000262901 ZSCAN20P17040 1043 aaPredicted RBP11.54□□□□□ -0.56
SIM1-201ENST00000262901 RNF214Q8ND24 703 aa11.54□□□□□ -0.56
SIM1-201ENST00000262901 ZNF526Q8TF50 670 aaPredicted RBP11.54□□□□□ -0.56
SIM1-201ENST00000262901 SSH1Q8WYL5 1049 aa11.54□□□□□ -0.56
SIM1-201ENST00000262901 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
SIM1-201ENST00000262901 TPM2P07951 284 aa11.54□□□□□ -0.56
SIM1-201ENST00000262901 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
SIM1-201ENST00000262901 TRMT2AQ8IZ69 625 aaKnown RBP11.53□□□□□ -0.56
SIM1-201ENST00000262901 RBM42Q9BTD8 480 aaKnown RBP11.53□□□□□ -0.56
SIM1-201ENST00000262901 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
SIM1-201ENST00000262901 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
SIM1-201ENST00000262901 FMNL2Q96PY5 1086 aa11.53□□□□□ -0.56
SIM1-201ENST00000262901 GOLGA6L6A8MZA4 724 aa11.53□□□□□ -0.56
SIM1-201ENST00000262901 NRDCO43847 1150 aa11.53□□□□□ -0.56
SIM1-201ENST00000262901 GNL2Q13823 731 aaKnown RBP11.53□□□□□ -0.56
SIM1-201ENST00000262901 GORABQ5T7V8 394 aa11.53□□□□□ -0.56
SIM1-201ENST00000262901 TRPC5Q9UL62 973 aaPredicted RBP11.53□□□□□ -0.56
SIM1-201ENST00000262901 DDX58O95786 925 aaKnown RBP11.52□□□□□ -0.56
SIM1-201ENST00000262901 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.56
SIM1-201ENST00000262901 C8orf58Q8NAV2 365 aa11.52□□□□□ -0.56
SIM1-201ENST00000262901 ZNF622Q969S3 477 aaKnown RBP eCLIP11.52□□□□□ -0.56
SIM1-201ENST00000262901 GPATCH3Q96I76 525 aa11.52□□□□□ -0.56
SIM1-201ENST00000262901 SLC52A2Q9HAB3 445 aa11.52□□□□□ -0.56
SIM1-201ENST00000262901 AHDC1Q5TGY3 1603 aaPredicted RBP11.52□□□□□ -0.56
SIM1-201ENST00000262901 SHPRHQ149N8 1683 aa11.52□□□□□ -0.57
SIM1-201ENST00000262901 CDC45O75419 566 aa11.52□□□□□ -0.57
SIM1-201ENST00000262901 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
SIM1-201ENST00000262901 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.57
SIM1-201ENST00000262901 PHLPP1O60346 1717 aa11.52□□□□□ -0.57
SIM1-201ENST00000262901 TRPM3Q9HCF6 1732 aaPredicted RBP11.52□□□□□ -0.57
SIM1-201ENST00000262901 NCAPD2Q15021 1401 aa11.52□□□□□ -0.57
SIM1-201ENST00000262901 SOS1Q07889 1333 aaPredicted RBP11.52□□□□□ -0.57
SIM1-201ENST00000262901 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.57
SIM1-201ENST00000262901 COL5A2P05997 1499 aaPredicted RBP11.51□□□□□ -0.57
SIM1-201ENST00000262901 PTCD1O75127 700 aaKnown RBP11.51□□□□□ -0.57
SIM1-201ENST00000262901 IGHDP01880 384 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms