RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 LMO7Q8WWI1 1683 aa27.57■■■□□ 2
MCF2L-201ENST00000261963 SRCIN1Q9C0H9 1055 aa27.57■■■□□ 2
MCF2L-201ENST00000261963 PLEKHO1Q53GL0 409 aaPredicted RBP27.56■■■□□ 2
MCF2L-201ENST00000261963 MPRIPQ6WCQ1 1025 aa27.56■■■□□ 2
MCF2L-201ENST00000261963 PXDNQ92626 1479 aa27.56■■■□□ 2
MCF2L-201ENST00000261963 TEFQ10587 303 aa27.55■■■□□ 2
MCF2L-201ENST00000261963 BTBD11A6QL63 1104 aa27.54■■■□□ 2
MCF2L-201ENST00000261963 POLA2Q14181 598 aa27.53■■■□□ 2
MCF2L-201ENST00000261963 ESYT1Q9BSJ8 1104 aa27.53■■■□□ 2
MCF2L-201ENST00000261963 GOLGA6L22H0YM25 854 aa27.53■■■□□ 2
MCF2L-201ENST00000261963 BEND3Q5T5X7 828 aa27.53■■■□□ 2
MCF2L-201ENST00000261963 CLEC17AQ6ZS10 378 aa27.53■■■□□ 2
MCF2L-201ENST00000261963 PPP1R42Q7Z4L9 355 aa27.53■■■□□ 2
MCF2L-201ENST00000261963 PLEKHG5O94827 1062 aa27.52■■■□□ 2
MCF2L-201ENST00000261963 AMOTQ4VCS5 1084 aa27.52■■■□□ 2
MCF2L-201ENST00000261963 PI4KAP2A4QPH2 592 aa27.52■■■□□ 2
MCF2L-201ENST00000261963 RNMTO43148 476 aaKnown RBP27.52■■■□□ 2
MCF2L-201ENST00000261963 PI4KAP1Q8N8J0 262 aa27.52■■■□□ 2
MCF2L-201ENST00000261963 DNAAF4Q8WXU2 420 aa27.52■■■□□ 2
MCF2L-201ENST00000261963 MAP7D2Q96T17 732 aa27.52■■■□□ 2
MCF2L-201ENST00000261963 ANXA1P04083 346 aa27.51■■■□□ 2
MCF2L-201ENST00000261963 ANKRD24Q8TF21 1146 aa27.51■■■□□ 2
MCF2L-201ENST00000261963 ST18O60284 1047 aa27.51■■□□□ 1.99
MCF2L-201ENST00000261963 NBPF7P0C2Y1 421 aaPredicted RBP27.51■■□□□ 1.99
MCF2L-201ENST00000261963 CHMLP26374 656 aa27.5■■□□□ 1.99
MCF2L-201ENST00000261963 IL1RAPL2Q9NP60 686 aa27.5■■□□□ 1.99
MCF2L-201ENST00000261963 RBM10P98175 930 aaKnown RBP27.5■■□□□ 1.99
MCF2L-201ENST00000261963 UNC5CLQ8IV45 518 aa27.5■■□□□ 1.99
MCF2L-201ENST00000261963 AXIN2Q9Y2T1 843 aa27.49■■□□□ 1.99
MCF2L-201ENST00000261963 ADCY9O60503 1353 aa27.49■■□□□ 1.99
MCF2L-201ENST00000261963 CHMP4AQ9BY43 222 aa27.49■■□□□ 1.99
MCF2L-201ENST00000261963 AOX1Q06278 1338 aa27.49■■□□□ 1.99
MCF2L-201ENST00000261963 KLHL40Q2TBA0 621 aa27.48■■□□□ 1.99
MCF2L-201ENST00000261963 LMOD2Q6P5Q4 547 aa27.48■■□□□ 1.99
MCF2L-201ENST00000261963 RILPL2Q969X0 211 aa27.48■■□□□ 1.99
MCF2L-201ENST00000261963 TRIM6-TRIM34B2RNG4 842 aa27.47■■□□□ 1.99
MCF2L-201ENST00000261963 RAB11FIP3O75154 756 aa27.47■■□□□ 1.99
MCF2L-201ENST00000261963 SURF6O75683 361 aaKnown RBP27.47■■□□□ 1.99
MCF2L-201ENST00000261963 CYP2E1P05181 493 aaPredicted RBP27.47■■□□□ 1.99
MCF2L-201ENST00000261963 C1orf141Q5JVX7 400 aa27.47■■□□□ 1.99
MCF2L-201ENST00000261963 OVOS2A0A0G2JMS6 1433 aa27.47■■□□□ 1.99
MCF2L-201ENST00000261963 TRPM3Q9HCF6 1732 aaPredicted RBP27.47■■□□□ 1.99
MCF2L-201ENST00000261963 DDX49Q9Y6V7 483 aaKnown RBP27.47■■□□□ 1.99
MCF2L-201ENST00000261963 HS1BP3Q53T59 392 aa27.46■■□□□ 1.99
MCF2L-201ENST00000261963 SRGAP3O43295 1099 aa27.46■■□□□ 1.99
MCF2L-201ENST00000261963 BAG4O95429 457 aaKnown RBP27.46■■□□□ 1.99
MCF2L-201ENST00000261963 NUTM1Q86Y26 1132 aa27.46■■□□□ 1.99
MCF2L-201ENST00000261963 HEG1Q9ULI3 1381 aa27.45■■□□□ 1.99
MCF2L-201ENST00000261963 CAMTA1Q9Y6Y1 1673 aa27.45■■□□□ 1.98
MCF2L-201ENST00000261963 KRT28Q7Z3Y7 464 aa27.45■■□□□ 1.98
MCF2L-201ENST00000261963 RHPN1Q8TCX5 695 aa27.45■■□□□ 1.98
MCF2L-201ENST00000261963 ZGPATQ8N5A5 531 aaKnown RBP27.45■■□□□ 1.98
MCF2L-201ENST00000261963 PRDM4Q9UKN5 801 aa27.45■■□□□ 1.98
MCF2L-201ENST00000261963 DBF4Q9UBU7 674 aaPredicted RBP27.44■■□□□ 1.98
MCF2L-201ENST00000261963 R3HCC1Q9Y3T6 440 aaKnown RBP27.44■■□□□ 1.98
MCF2L-201ENST00000261963 GIGYF1O75420 1035 aaPredicted RBP27.43■■□□□ 1.98
MCF2L-201ENST00000261963 NUCB2P80303 420 aa27.43■■□□□ 1.98
MCF2L-201ENST00000261963 PKP1Q13835 747 aa27.43■■□□□ 1.98
MCF2L-201ENST00000261963 PALD1Q9ULE6 856 aa27.43■■□□□ 1.98
MCF2L-201ENST00000261963 PROSER3Q2NL68 480 aa27.43■■□□□ 1.98
MCF2L-201ENST00000261963 CWC22Q9HCG8 908 aaKnown RBP27.43■■□□□ 1.98
MCF2L-201ENST00000261963 FAM13BQ9NYF5 915 aa27.43■■□□□ 1.98
MCF2L-201ENST00000261963 C1orf167Q5SNV9 1468 aa27.42■■□□□ 1.98
MCF2L-201ENST00000261963 PI4K2BQ8TCG2 481 aa27.42■■□□□ 1.98
MCF2L-201ENST00000261963 PROSER2Q86WR7 435 aaPredicted RBP27.41■■□□□ 1.98
MCF2L-201ENST00000261963 IL25Q9H293 177 aa27.41■■□□□ 1.98
MCF2L-201ENST00000261963 ANO2Q9NQ90 1003 aa27.41■■□□□ 1.98
MCF2L-201ENST00000261963 AK9Q5TCS8 1911 aa27.41■■□□□ 1.98
MCF2L-201ENST00000261963 PRAMEF22A3QJZ6 481 aa27.41■■□□□ 1.98
MCF2L-201ENST00000261963 NEK4P51957 841 aa27.4■■□□□ 1.98
MCF2L-201ENST00000261963 ZNF445P59923 1031 aa27.4■■□□□ 1.98
MCF2L-201ENST00000261963 KIF1BPQ96EK5 621 aa27.4■■□□□ 1.98
MCF2L-201ENST00000261963 NOL7Q9UMY1 257 aaKnown RBP27.4■■□□□ 1.98
MCF2L-201ENST00000261963 ZNF500O60304 480 aaPredicted RBP27.39■■□□□ 1.98
MCF2L-201ENST00000261963 ANAPC15P60006 121 aa27.39■■□□□ 1.97
MCF2L-201ENST00000261963 IL17RAQ96F46 866 aa27.39■■□□□ 1.97
MCF2L-201ENST00000261963 MST1RQ04912 1400 aa27.38■■□□□ 1.97
MCF2L-201ENST00000261963 MAP3K2Q9Y2U5 619 aa27.38■■□□□ 1.97
MCF2L-201ENST00000261963 ERBB3P21860 1342 aa27.38■■□□□ 1.97
MCF2L-201ENST00000261963 MCCP23508 829 aa27.38■■□□□ 1.97
MCF2L-201ENST00000261963 MTX1Q13505 466 aa27.37■■□□□ 1.97
MCF2L-201ENST00000261963 ZDHHC9Q9Y397 364 aa27.37■■□□□ 1.97
MCF2L-201ENST00000261963 LMTK3Q96Q04 1460 aa27.37■■□□□ 1.97
MCF2L-201ENST00000261963 TMX3Q96JJ7 454 aa27.37■■□□□ 1.97
MCF2L-201ENST00000261963 KSR2Q6VAB6 950 aa27.36■■□□□ 1.97
MCF2L-201ENST00000261963 MAP4K4O95819 1239 aaPredicted RBP27.36■■□□□ 1.97
MCF2L-201ENST00000261963 C19orf44Q9H6X5 657 aa27.36■■□□□ 1.97
MCF2L-201ENST00000261963 SIPA1L3O60292 1781 aaPredicted RBP27.35■■□□□ 1.97
MCF2L-201ENST00000261963 ALDH1L1O75891 902 aa27.35■■□□□ 1.97
MCF2L-201ENST00000261963 KIF1AQ12756 1690 aa27.35■■□□□ 1.97
MCF2L-201ENST00000261963 ADAMTS7Q9UKP4 1686 aa27.35■■□□□ 1.97
MCF2L-201ENST00000261963 UQCRHLA0A096LP55 91 aa27.35■■□□□ 1.97
MCF2L-201ENST00000261963 UQCRHP07919 91 aa27.35■■□□□ 1.97
MCF2L-201ENST00000261963 ZC3H6P61129 1189 aaKnown RBP27.35■■□□□ 1.97
MCF2L-201ENST00000261963 MTERF4Q7Z6M4 381 aaKnown RBP27.35■■□□□ 1.97
MCF2L-201ENST00000261963 HSP90AB4PQ58FF6 505 aa27.33■■□□□ 1.97
MCF2L-201ENST00000261963 MCTP1Q6DN14 999 aa27.33■■□□□ 1.97
MCF2L-201ENST00000261963 MCM2P49736 904 aa27.33■■□□□ 1.97
MCF2L-201ENST00000261963 RGPD5Q99666 1765 aa27.33■■□□□ 1.97
MCF2L-201ENST00000261963 USP42Q9H9J4 1324 aaKnown RBP27.33■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms