RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 HSPA4P34932 840 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 AKAP17AQ02040 695 aaKnown RBP12.47□□□□□ -0.41
KPNA3-201ENST00000261667 ELF2Q15723 593 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 RBM33Q96EV2 1170 aaKnown RBP12.47□□□□□ -0.41
KPNA3-201ENST00000261667 LAMC1P11047 1609 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 PTPRTO14522 1441 aa12.46□□□□□ -0.41
KPNA3-201ENST00000261667 TERF2Q15554 542 aa12.46□□□□□ -0.41
KPNA3-201ENST00000261667 MAP9Q49MG5 647 aa12.46□□□□□ -0.41
KPNA3-201ENST00000261667 ADAMTS8Q9UP79 889 aa12.46□□□□□ -0.41
KPNA3-201ENST00000261667 RRP15Q9Y3B9 282 aaKnown RBP12.46□□□□□ -0.41
KPNA3-201ENST00000261667 SATB1Q01826 763 aa12.46□□□□□ -0.41
KPNA3-201ENST00000261667 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
KPNA3-201ENST00000261667 NUCKS1Q9H1E3 243 aaKnown RBP12.46□□□□□ -0.41
KPNA3-201ENST00000261667 IFT172Q9UG01 1749 aa12.46□□□□□ -0.42
KPNA3-201ENST00000261667 ATP2C2O75185 946 aa12.46□□□□□ -0.42
KPNA3-201ENST00000261667 GEMIN8Q9NWZ8 242 aaKnown RBP12.46□□□□□ -0.42
KPNA3-201ENST00000261667 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
KPNA3-201ENST00000261667 RPUSD2Q8IZ73 545 aaKnown RBP12.45□□□□□ -0.42
KPNA3-201ENST00000261667 VEZTQ9HBM0 779 aa12.45□□□□□ -0.42
KPNA3-201ENST00000261667 IRAK4Q9NWZ3 460 aa12.45□□□□□ -0.42
KPNA3-201ENST00000261667 ZSCAN12O43309 604 aa12.45□□□□□ -0.42
KPNA3-201ENST00000261667 KIF1CO43896 1103 aaKnown RBP12.45□□□□□ -0.42
KPNA3-201ENST00000261667 PTGS1P23219 599 aa12.45□□□□□ -0.42
KPNA3-201ENST00000261667 KRT85P78386 507 aa12.45□□□□□ -0.42
KPNA3-201ENST00000261667 HOOK1Q9UJC3 728 aaKnown RBP12.45□□□□□ -0.42
KPNA3-201ENST00000261667 SKILP12757 684 aa12.45□□□□□ -0.42
KPNA3-201ENST00000261667 INPP5BP32019 993 aa12.45□□□□□ -0.42
KPNA3-201ENST00000261667 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
KPNA3-201ENST00000261667 MYO1CO00159 1063 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 SLC24A3Q9HC58 644 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 EFCAB6Q5THR3 1501 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 CLTCL1P53675 1640 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 A0A0G2JS52 829 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 ZKSCAN1P17029 563 aaPredicted RBP12.44□□□□□ -0.42
KPNA3-201ENST00000261667 OLFM4Q6UX06 510 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 SYT10Q6XYQ8 523 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 GOLGA6L10A0A0M3HER8 536 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 SEC24BO95487 1268 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 SSBP05455 408 aaKnown RBP eCLIP12.44□□□□□ -0.42
KPNA3-201ENST00000261667 CEP57L1Q8IYX8 460 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 DNAI1Q9UI46 699 aa12.44□□□□□ -0.42
KPNA3-201ENST00000261667 KIF4BQ2VIQ3 1234 aa12.43□□□□□ -0.42
KPNA3-201ENST00000261667 DHX29Q7Z478 1369 aaKnown RBP12.43□□□□□ -0.42
KPNA3-201ENST00000261667 OAS2P29728 719 aaKnown RBP12.43□□□□□ -0.42
KPNA3-201ENST00000261667 PCMTD1Q96MG8 357 aaPredicted RBP12.43□□□□□ -0.42
KPNA3-201ENST00000261667 TMX4Q9H1E5 349 aaPredicted RBP12.43□□□□□ -0.42
KPNA3-201ENST00000261667 CCDC196A0A1B0GTZ2 297 aa12.43□□□□□ -0.42
KPNA3-201ENST00000261667 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
KPNA3-201ENST00000261667 RAD51AP2Q09MP3 1159 aa12.43□□□□□ -0.42
KPNA3-201ENST00000261667 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
KPNA3-201ENST00000261667 TERF2IPQ9NYB0 399 aa12.43□□□□□ -0.42
KPNA3-201ENST00000261667 FOSBP53539 338 aa12.43□□□□□ -0.42
KPNA3-201ENST00000261667 RALGAPBQ86X10 1494 aa12.43□□□□□ -0.42
KPNA3-201ENST00000261667 SIGLEC1Q9BZZ2 1709 aa12.42□□□□□ -0.42
KPNA3-201ENST00000261667 REREQ9P2R6 1566 aa12.42□□□□□ -0.42
KPNA3-201ENST00000261667 CKAP2LQ8IYA6 745 aa12.42□□□□□ -0.42
KPNA3-201ENST00000261667 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
KPNA3-201ENST00000261667 CCDC114Q96M63 670 aa12.42□□□□□ -0.42
KPNA3-201ENST00000261667 SUFUQ9UMX1 484 aa12.42□□□□□ -0.42
KPNA3-201ENST00000261667 ZNF445P59923 1031 aa12.42□□□□□ -0.42
KPNA3-201ENST00000261667 CLASRPQ8N2M8 674 aaKnown RBP12.42□□□□□ -0.42
KPNA3-201ENST00000261667 CCDC97Q96F63 343 aaPredicted RBP12.42□□□□□ -0.42
KPNA3-201ENST00000261667 CALR3Q96L12 384 aaKnown RBP12.42□□□□□ -0.42
KPNA3-201ENST00000261667 SPAG9O60271 1321 aaKnown RBP12.42□□□□□ -0.42
KPNA3-201ENST00000261667 MCTP2Q6DN12 878 aa12.42□□□□□ -0.42
KPNA3-201ENST00000261667 SLC4A10Q6U841 1118 aa12.42□□□□□ -0.42
KPNA3-201ENST00000261667 RLBP1P12271 317 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 CEBPZQ03701 1054 aaKnown RBP12.41□□□□□ -0.42
KPNA3-201ENST00000261667 DBN1Q16643 649 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 GIMAP6Q6P9H5 292 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 WDR66Q8TBY9 1149 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
KPNA3-201ENST00000261667 GOLGA5Q8TBA6 731 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 MRFAP1L1Q96HT8 127 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
KPNA3-201ENST00000261667 MICAL1Q8TDZ2 1067 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
KPNA3-201ENST00000261667 CXorf56Q9H5V9 222 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 SWAP70Q9UH65 585 aa12.41□□□□□ -0.42
KPNA3-201ENST00000261667 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
KPNA3-201ENST00000261667 ZC3H13Q5T200 1668 aaKnown RBP12.4□□□□□ -0.42
KPNA3-201ENST00000261667 FRMD3A2A2Y4 597 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 PDCP20941 246 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 GSDMDP57764 484 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 NEXNQ0ZGT2 675 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 GGT6Q6P531 493 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 CFAP45Q9UL16 551 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 A2MP01023 1474 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 TAX1BP1Q86VP1 789 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 GNG11P61952 73 aa12.4□□□□□ -0.42
KPNA3-201ENST00000261667 SMARCE1Q969G3 411 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 YY1AP1Q9H869 796 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 MADDQ8WXG6 1647 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 VGFO15240 615 aaPredicted RBP12.39□□□□□ -0.43
KPNA3-201ENST00000261667 ZNF165P49910 485 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 LIG3P49916 1009 aa12.39□□□□□ -0.43
KPNA3-201ENST00000261667 SMC5Q8IY18 1101 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms