RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 CCDC196A0A1B0GTZ2 297 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 TXLNAP40222 546 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 ALDH1L2Q3SY69 923 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 CCDC38Q502W7 563 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 ODF2Q5BJF6 829 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 DNAJC21Q5F1R6 531 aaKnown RBP9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 RNF187Q5TA31 235 aaPredicted RBP9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 ABCA9Q8IUA7 1624 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 A0A0G2JS52 829 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 KDM4AO75164 1064 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 NAP1L1P55209 391 aaKnown RBP9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 PIP4K2BP78356 416 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 SPATA24Q86W54 205 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 ANAPC15P60006 121 aa9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 TICAM2Q86XR7 235 aa9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 GOLGA5Q8TBA6 731 aa9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 TOP1P11387 765 aaKnown RBP9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 XBP1P17861 261 aa9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 OTUD6BQ8N6M0 293 aa9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 NAA15Q9BXJ9 866 aaKnown RBP9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 SUDS3Q9H7L9 328 aaPredicted RBP9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 ATP10AO60312 1499 aa9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 A2MP01023 1474 aa9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 ELP1O95163 1332 aa9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 TRDNQ13061 729 aa9.69□□□□□ -0.86
SNCAIP-201ENST00000261367 SMC1AQ14683 1233 aaKnown RBP9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 TCP11L2Q8N4U5 519 aa9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 VWDEQ8N2E2 1590 aa9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 AP1ARQ63HQ0 302 aa9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 TEX2Q8IWB9 1127 aa9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 ARFGAP2Q8N6H7 521 aa9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 PRIM1P49642 420 aaKnown RBP9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 INTS4Q96HW7 963 aaKnown RBP9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 CCDC175P0C221 793 aa9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 NSRP1Q9H0G5 558 aaKnown RBP9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 PRDM15P57071 1507 aaPredicted RBP9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 ZFYVE16Q7Z3T8 1539 aa9.68□□□□□ -0.86
SNCAIP-201ENST00000261367 KIF5BP33176 963 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 CCT4P50991 539 aaKnown RBP9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 ARHGAP5Q13017 1502 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 STIM1Q13586 685 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 INO80Q9ULG1 1556 aaPredicted RBP9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 PRAG1Q86YV5 1406 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 TRAPPC8Q9Y2L5 1435 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 GOLIM4O00461 696 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 SKILP12757 684 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 CCDC121Q6ZUS5 278 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 PDRG1Q9NUG6 133 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 GCOM1H8Y6P7 765 aaPredicted RBP9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 RIOK3O14730 519 aaKnown RBP9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 HSF2BPO75031 334 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 MYZAPP0CAP1 466 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 MAP2K1Q02750 393 aaPredicted RBP9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 CEP152O94986 1710 aa9.67□□□□□ -0.86
SNCAIP-201ENST00000261367 ANKRD18BA2A2Z9 1011 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 VGLL3A8MV65 326 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 ZNF165P49910 485 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 BCL2L12Q9HB09 334 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 PLCH2O75038 1416 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 CCDC172P0C7W6 258 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 ME1P48163 572 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 CFAP100Q494V2 611 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 DUSP27Q5VZP5 1158 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 ERBINQ96RT1 1412 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 CTAGE15A4D2H0 777 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 CTAGE8P0CG41 777 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 ERCC3P19447 782 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 U2AF2P26368 475 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 CTAGE6Q86UF2 777 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 CTAGE4Q8IX94 777 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 TAOK2Q9UL54 1235 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 RAD50Q92878 1312 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 DRC1Q96MC2 740 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 IQGAP1P46940 1657 aa9.66□□□□□ -0.86
SNCAIP-201ENST00000261367 RBBP5Q15291 538 aaKnown RBP9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 ANKS4BQ8N8V4 417 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 CEP120Q8N960 986 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 KDM2BQ8NHM5 1336 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 PPFIA3O75145 1194 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 CASTP20810 708 aaKnown RBP9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 ZSCAN26Q16670 478 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 TOMM22Q9NS69 142 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 LIMCH1Q9UPQ0 1083 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 SPHKAPQ2M3C7 1700 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 MADDQ8WXG6 1647 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 PAFAH1B1P43034 410 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 CCDC186Q7Z3E2 898 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 RPAINQ86UA6 219 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 YY1AP1Q9H869 796 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 ARAP3Q8WWN8 1544 aa9.65□□□□□ -0.86
SNCAIP-201ENST00000261367 GNAI2P04899 355 aa9.65□□□□□ -0.87
SNCAIP-201ENST00000261367 G3BP1Q13283 466 aaKnown RBP eCLIP9.65□□□□□ -0.87
SNCAIP-201ENST00000261367 ENOX2Q16206 610 aaKnown RBP9.65□□□□□ -0.87
SNCAIP-201ENST00000261367 CCDC30Q5VVM6 783 aa9.65□□□□□ -0.87
SNCAIP-201ENST00000261367 IFT172Q9UG01 1749 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms