RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 C9orf131Q5VYM1 1079 aa25.02■■□□□ 1.6
KHDC1-201ENST00000257765 SBF1O95248 1867 aa25.02■■□□□ 1.6
KHDC1-201ENST00000257765 DLEC1Q9Y238 1755 aa25.01■■□□□ 1.59
KHDC1-201ENST00000257765 CHRNA5P30532 468 aa25.01■■□□□ 1.59
KHDC1-201ENST00000257765 CC2D1BQ5T0F9 858 aaKnown RBP25.01■■□□□ 1.59
KHDC1-201ENST00000257765 NMRK2Q9NPI5 230 aa25.01■■□□□ 1.59
KHDC1-201ENST00000257765 ZBTB1Q9Y2K1 713 aa25■■□□□ 1.59
KHDC1-201ENST00000257765 PER1O15534 1290 aaPredicted RBP24.99■■□□□ 1.59
KHDC1-201ENST00000257765 NARFQ9UHQ1 456 aa24.99■■□□□ 1.59
KHDC1-201ENST00000257765 COL3A1P02461 1466 aaPredicted RBP24.98■■□□□ 1.59
KHDC1-201ENST00000257765 APLP1P51693 650 aa24.98■■□□□ 1.59
KHDC1-201ENST00000257765 IFFO2Q5TF58 517 aa24.98■■□□□ 1.59
KHDC1-201ENST00000257765 VSIG10Q8N0Z9 540 aa24.98■■□□□ 1.59
KHDC1-201ENST00000257765 TNRC6CQ9HCJ0 1690 aaKnown RBP24.97■■□□□ 1.59
KHDC1-201ENST00000257765 SIPA1L3O60292 1781 aaPredicted RBP24.96■■□□□ 1.59
KHDC1-201ENST00000257765 NFIXQ14938 502 aa24.96■■□□□ 1.59
KHDC1-201ENST00000257765 RNF181Q9P0P0 153 aa24.96■■□□□ 1.59
KHDC1-201ENST00000257765 WDR90Q96KV7 1748 aa24.95■■□□□ 1.58
KHDC1-201ENST00000257765 TTC5Q8N0Z6 440 aa24.94■■□□□ 1.58
KHDC1-201ENST00000257765 SCN7AQ01118 1682 aa24.94■■□□□ 1.58
KHDC1-201ENST00000257765 NPC1L1Q9UHC9 1359 aa24.93■■□□□ 1.58
KHDC1-201ENST00000257765 KDM2BQ8NHM5 1336 aa24.93■■□□□ 1.58
KHDC1-201ENST00000257765 C16orf71Q8IYS4 520 aaPredicted RBP24.93■■□□□ 1.58
KHDC1-201ENST00000257765 BCL2L12Q9HB09 334 aa24.93■■□□□ 1.58
KHDC1-201ENST00000257765 CANXP27824 592 aaKnown RBP24.92■■□□□ 1.58
KHDC1-201ENST00000257765 RBM46Q8TBY0 533 aaKnown RBP24.92■■□□□ 1.58
KHDC1-201ENST00000257765 U2SURPO15042 1029 aaKnown RBP24.91■■□□□ 1.58
KHDC1-201ENST00000257765 SERPINB2P05120 415 aa24.91■■□□□ 1.58
KHDC1-201ENST00000257765 STARD3NLO95772 234 aa24.9■■□□□ 1.58
KHDC1-201ENST00000257765 TEFQ10587 303 aa24.9■■□□□ 1.58
KHDC1-201ENST00000257765 GAS2L2Q8NHY3 880 aa24.9■■□□□ 1.58
KHDC1-201ENST00000257765 TIAM2Q8IVF5 1701 aa24.89■■□□□ 1.57
KHDC1-201ENST00000257765 CCDC88AQ3V6T2 1871 aa24.88■■□□□ 1.57
KHDC1-201ENST00000257765 ANKRD31Q8N7Z5 1873 aa24.88■■□□□ 1.57
KHDC1-201ENST00000257765 A0A087WZG4 1122 aa24.88■■□□□ 1.57
KHDC1-201ENST00000257765 GNAT3A8MTJ3 354 aa24.88■■□□□ 1.57
KHDC1-201ENST00000257765 EIF5P55010 431 aaKnown RBP24.88■■□□□ 1.57
KHDC1-201ENST00000257765 RASSF7Q02833 373 aa24.88■■□□□ 1.57
KHDC1-201ENST00000257765 CNGB1Q14028 1251 aaPredicted RBP24.88■■□□□ 1.57
KHDC1-201ENST00000257765 CARMIL3Q8ND23 1372 aa24.88■■□□□ 1.57
KHDC1-201ENST00000257765 HEG1Q9ULI3 1381 aa24.88■■□□□ 1.57
KHDC1-201ENST00000257765 ZC3H4Q9UPT8 1303 aaKnown RBP24.87■■□□□ 1.57
KHDC1-201ENST00000257765 ZNF496Q96IT1 587 aaPredicted RBP24.87■■□□□ 1.57
KHDC1-201ENST00000257765 ZNF790Q6PG37 636 aa24.86■■□□□ 1.57
KHDC1-201ENST00000257765 IL17REQ8NFR9 667 aa24.86■■□□□ 1.57
KHDC1-201ENST00000257765 FSTL1Q12841 308 aa24.85■■□□□ 1.57
KHDC1-201ENST00000257765 BICDL1Q6ZP65 573 aa24.85■■□□□ 1.57
KHDC1-201ENST00000257765 C2CD5Q86YS7 1000 aa24.85■■□□□ 1.57
KHDC1-201ENST00000257765 TTLL6Q8N841 843 aa24.85■■□□□ 1.57
KHDC1-201ENST00000257765 COL11A2P13942 1736 aaPredicted RBP24.84■■□□□ 1.57
KHDC1-201ENST00000257765 DNAJC5GQ8N7S2 189 aa24.84■■□□□ 1.57
KHDC1-201ENST00000257765 TEX13AQ9BXU3 409 aaPredicted RBP24.84■■□□□ 1.57
KHDC1-201ENST00000257765 RRAGCQ9HB90 399 aa24.84■■□□□ 1.57
KHDC1-201ENST00000257765 BCORQ6W2J9 1755 aa24.83■■□□□ 1.57
KHDC1-201ENST00000257765 H0YIN7 160 aa24.83■■□□□ 1.57
KHDC1-201ENST00000257765 LMNB1P20700 586 aa24.83■■□□□ 1.57
KHDC1-201ENST00000257765 ZNF330Q9Y3S2 320 aaPredicted RBP24.82■■□□□ 1.56
KHDC1-201ENST00000257765 CEMIPQ8WUJ3 1361 aa24.81■■□□□ 1.56
KHDC1-201ENST00000257765 TBC1D9BQ66K14 1250 aa24.81■■□□□ 1.56
KHDC1-201ENST00000257765 FMNL2Q96PY5 1086 aa24.81■■□□□ 1.56
KHDC1-201ENST00000257765 IL6STP40189 918 aaPredicted RBP24.8■■□□□ 1.56
KHDC1-201ENST00000257765 PRELPP51888 382 aa24.79■■□□□ 1.56
KHDC1-201ENST00000257765 CFAP53Q96M91 514 aa24.79■■□□□ 1.56
KHDC1-201ENST00000257765 PDZRN3Q9UPQ7 1066 aa24.79■■□□□ 1.56
KHDC1-201ENST00000257765 TBC1D2BQ9UPU7 963 aa24.79■■□□□ 1.56
KHDC1-201ENST00000257765 CACNA1SQ13698 1873 aa24.79■■□□□ 1.56
KHDC1-201ENST00000257765 DICER1Q9UPY3 1922 aaKnown RBP24.78■■□□□ 1.56
KHDC1-201ENST00000257765 PRKAR2BP31323 418 aa24.78■■□□□ 1.56
KHDC1-201ENST00000257765 NPM2Q86SE8 214 aaKnown RBP24.78■■□□□ 1.56
KHDC1-201ENST00000257765 FER1L6Q2WGJ9 1857 aa24.78■■□□□ 1.56
KHDC1-201ENST00000257765 NFKBIEO00221 500 aa24.77■■□□□ 1.56
KHDC1-201ENST00000257765 PRR5LQ6MZQ0 368 aa24.77■■□□□ 1.56
KHDC1-201ENST00000257765 SMC1BQ8NDV3 1235 aa24.77■■□□□ 1.56
KHDC1-201ENST00000257765 BRIP1Q9BX63 1249 aa24.77■■□□□ 1.56
KHDC1-201ENST00000257765 RSPH6AQ9H0K4 717 aa24.77■■□□□ 1.56
KHDC1-201ENST00000257765 GLTPD2A6NH11 291 aa24.76■■□□□ 1.55
KHDC1-201ENST00000257765 BTBD11A6QL63 1104 aa24.76■■□□□ 1.55
KHDC1-201ENST00000257765 A1BGP04217 495 aa24.76■■□□□ 1.55
KHDC1-201ENST00000257765 PDE6BP35913 854 aa24.76■■□□□ 1.55
KHDC1-201ENST00000257765 HTRA3P83110 453 aa24.76■■□□□ 1.55
KHDC1-201ENST00000257765 ZNF622Q969S3 477 aaKnown RBP eCLIP24.76■■□□□ 1.55
KHDC1-201ENST00000257765 PHACTR3Q96KR7 559 aa24.76■■□□□ 1.55
KHDC1-201ENST00000257765 ARFGEF2Q9Y6D5 1785 aa24.75■■□□□ 1.55
KHDC1-201ENST00000257765 KLRG1Q96E93 195 aa24.75■■□□□ 1.55
KHDC1-201ENST00000257765 KCNQ3O43525 872 aa24.74■■□□□ 1.55
KHDC1-201ENST00000257765 CAMTA2O94983 1202 aa24.74■■□□□ 1.55
KHDC1-201ENST00000257765 VEGFAP15692 232 aaPredicted RBP24.73■■□□□ 1.55
KHDC1-201ENST00000257765 CCDC24Q8N4L8 307 aa24.73■■□□□ 1.55
KHDC1-201ENST00000257765 CNBD1Q8NA66 436 aa24.73■■□□□ 1.55
KHDC1-201ENST00000257765 SETDB2Q96T68 719 aa24.73■■□□□ 1.55
KHDC1-201ENST00000257765 NUDCQ9Y266 331 aa24.73■■□□□ 1.55
KHDC1-201ENST00000257765 NPHP1O15259 732 aa24.72■■□□□ 1.55
KHDC1-201ENST00000257765 C21orf2O43822 256 aa24.71■■□□□ 1.55
KHDC1-201ENST00000257765 DZIP3Q86Y13 1208 aaKnown RBP24.71■■□□□ 1.55
KHDC1-201ENST00000257765 SLX4Q8IY92 1834 aa24.7■■□□□ 1.55
KHDC1-201ENST00000257765 ST5P78524 1137 aa24.7■■□□□ 1.54
KHDC1-201ENST00000257765 ZNF219Q9P2Y4 722 aaPredicted RBP24.7■■□□□ 1.54
KHDC1-201ENST00000257765 U2AF1L5P0DN76 240 aaPredicted RBP24.69■■□□□ 1.54
KHDC1-201ENST00000257765 U2AF1Q01081 240 aaKnown RBP eCLIP24.69■■□□□ 1.54
KHDC1-201ENST00000257765 JMYQ8N9B5 988 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms