RNA–Protein interactions for RNA: ENST00000255390.9

SCO1-201, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCO1, Length 9,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-201ENST00000255390 ABCC8Q09428 1581 aa13.14□□□□□ -0.31
SCO1-201ENST00000255390 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
SCO1-201ENST00000255390 GPATCH11Q8N954 259 aa13.14□□□□□ -0.31
SCO1-201ENST00000255390 AKAP2Q9Y2D5 859 aa13.14□□□□□ -0.31
SCO1-201ENST00000255390 SMC1BQ8NDV3 1235 aa13.14□□□□□ -0.31
SCO1-201ENST00000255390 CCDC160A6NGH7 325 aa13.13□□□□□ -0.31
SCO1-201ENST00000255390 IQCA1Q86XH1 822 aa13.13□□□□□ -0.31
SCO1-201ENST00000255390 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
SCO1-201ENST00000255390 DDX12PQ92771 950 aa13.13□□□□□ -0.31
SCO1-201ENST00000255390 NCBP1Q09161 790 aaKnown RBP13.13□□□□□ -0.31
SCO1-201ENST00000255390 BIRC2Q13490 618 aa13.13□□□□□ -0.31
SCO1-201ENST00000255390 ZSCAN12O43309 604 aa13.13□□□□□ -0.31
SCO1-201ENST00000255390 TPD52P55327 224 aaPredicted RBP13.13□□□□□ -0.31
SCO1-201ENST00000255390 CALML4Q96GE6 196 aa13.13□□□□□ -0.31
SCO1-201ENST00000255390 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
SCO1-201ENST00000255390 ANAPC4Q9UJX5 808 aa13.13□□□□□ -0.31
SCO1-201ENST00000255390 CASTP20810 708 aaKnown RBP13.12□□□□□ -0.31
SCO1-201ENST00000255390 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
SCO1-201ENST00000255390 NOB1Q9ULX3 412 aaKnown RBP13.12□□□□□ -0.31
SCO1-201ENST00000255390 IFIT1P09914 478 aaKnown RBP13.12□□□□□ -0.31
SCO1-201ENST00000255390 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
SCO1-201ENST00000255390 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
SCO1-201ENST00000255390 SRGAP3O43295 1099 aa13.12□□□□□ -0.31
SCO1-201ENST00000255390 IPO4Q8TEX9 1081 aaKnown RBP13.12□□□□□ -0.31
SCO1-201ENST00000255390 PAIP2Q9BPZ3 127 aaKnown RBP13.12□□□□□ -0.31
SCO1-201ENST00000255390 KIF4BQ2VIQ3 1234 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 SEPT6Q14141 434 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 PPP1R9BQ96SB3 815 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 CCDC194A0A1B0GVG4 234 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 STX6O43752 255 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 FBF1Q8TES7 1133 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 SFPQP23246 707 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCO1-201ENST00000255390 CATIPQ7Z7H3 387 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 TTC12Q9H892 705 aaPredicted RBP13.11□□□□□ -0.31
SCO1-201ENST00000255390 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 PHACTR2O75167 634 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 MTIF2P46199 727 aaKnown RBP13.11□□□□□ -0.31
SCO1-201ENST00000255390 TMOD3Q9NYL9 352 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
SCO1-201ENST00000255390 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 CCDC63Q8NA47 563 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 AMPD3Q01432 767 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 CAMK4Q16566 473 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 PDCL2Q8N4E4 241 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 CCDC40Q4G0X9 1142 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 SLC12A7Q9Y666 1083 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 MAP3K11Q16584 847 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 CCDC83Q8IWF9 413 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 BIN2Q9UBW5 565 aaPredicted RBP13.1□□□□□ -0.31
SCO1-201ENST00000255390 MKRN1Q9UHC7 482 aaKnown RBP13.1□□□□□ -0.31
SCO1-201ENST00000255390 C6orf229H3BNL8 230 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 KIF4AO95239 1232 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 PLVAPQ9BX97 442 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 CCDC14Q49A88 953 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 DDX46Q7L014 1031 aaKnown RBP13.1□□□□□ -0.31
SCO1-201ENST00000255390 CCDC12Q8WUD4 166 aaPredicted RBP13.1□□□□□ -0.31
SCO1-201ENST00000255390 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
SCO1-201ENST00000255390 MAATS1Q7Z4T9 603 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 CCDC144CPQ8IYA2 1237 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
SCO1-201ENST00000255390 CABP5Q9NP86 173 aa13.1□□□□□ -0.31
SCO1-201ENST00000255390 KIF2AO00139 706 aaPredicted RBP13.09□□□□□ -0.31
SCO1-201ENST00000255390 SATB1Q01826 763 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 MAP3K12Q12852 859 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 NOL3O60936 208 aaKnown RBP13.09□□□□□ -0.31
SCO1-201ENST00000255390 SULT6B1Q6IMI4 303 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 GMNNO75496 209 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 YEATS4O95619 227 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 SLC5A1P13866 664 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 CTR9Q6PD62 1173 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 HAUS7Q99871 368 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 SSRP1Q08945 709 aaKnown RBP13.09□□□□□ -0.31
SCO1-201ENST00000255390 TMEM132EQ6IEE7 984 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 PTPRGP23470 1445 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 HLA-DOAP06340 250 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 PLS1Q14651 629 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 DPH6Q7L8W6 267 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 ARHGAP5Q13017 1502 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 CECR2Q9BXF3 1484 aa13.09□□□□□ -0.31
SCO1-201ENST00000255390 CCDC172P0C7W6 258 aa13.08□□□□□ -0.31
SCO1-201ENST00000255390 CCDC6Q16204 474 aa13.08□□□□□ -0.31
SCO1-201ENST00000255390 TCP11L1Q9NUJ3 509 aa13.08□□□□□ -0.31
SCO1-201ENST00000255390 TTC36A6NLP5 189 aa13.08□□□□□ -0.32
SCO1-201ENST00000255390 GAS8O95995 478 aa13.08□□□□□ -0.32
SCO1-201ENST00000255390 KIF5AQ12840 1032 aa13.08□□□□□ -0.32
SCO1-201ENST00000255390 CEP112Q8N8E3 955 aa13.08□□□□□ -0.32
SCO1-201ENST00000255390 PTPN14Q15678 1187 aa13.08□□□□□ -0.32
SCO1-201ENST00000255390 KIF18AQ8NI77 898 aa13.08□□□□□ -0.32
SCO1-201ENST00000255390 FAM114A1Q8IWE2 563 aa13.08□□□□□ -0.32
SCO1-201ENST00000255390 CCDC155Q8N6L0 562 aa13.08□□□□□ -0.32
SCO1-201ENST00000255390 KIAA0753Q2KHM9 967 aa13.07□□□□□ -0.32
SCO1-201ENST00000255390 BCAR3O75815 825 aa13.07□□□□□ -0.32
SCO1-201ENST00000255390 VAT1LQ9HCJ6 419 aa13.07□□□□□ -0.32
SCO1-201ENST00000255390 IFI16Q16666 785 aaKnown RBP13.07□□□□□ -0.32
SCO1-201ENST00000255390 USP37Q86T82 979 aa13.07□□□□□ -0.32
SCO1-201ENST00000255390 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
SCO1-201ENST00000255390 PDIA4P13667 645 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms