RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 CEP83Q9Y592 693 aa15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 RTEL1-TNFRSF6BF6WH68 1400 aa15.27■□□□□ 0.04
PCDHGA3-201ENST00000253812 GNAI2P04899 355 aa15.27■□□□□ 0.04
PCDHGA3-201ENST00000253812 CEP112Q8N8E3 955 aa15.27■□□□□ 0.04
PCDHGA3-201ENST00000253812 USO1O60763 962 aaKnown RBP15.27■□□□□ 0.04
PCDHGA3-201ENST00000253812 IDI1Q13907 227 aa15.27■□□□□ 0.04
PCDHGA3-201ENST00000253812 SETSIPP0DME0 302 aa15.27■□□□□ 0.03
PCDHGA3-201ENST00000253812 SEPT6Q14141 434 aa15.27■□□□□ 0.03
PCDHGA3-201ENST00000253812 KRT32Q14532 448 aa15.27■□□□□ 0.03
PCDHGA3-201ENST00000253812 C1orf115Q9H7X2 142 aa15.27■□□□□ 0.03
PCDHGA3-201ENST00000253812 ADGRF5Q8IZF2 1346 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 FERMT3Q86UX7 667 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 JAKMIP1Q96N16 626 aaKnown RBP15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 ATP10BO94823 1461 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 NAA25Q14CX7 972 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 CCDC6Q16204 474 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 MSL1Q68DK7 614 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 WAPLQ7Z5K2 1190 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 DAAM2Q86T65 1068 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 NOB1Q9ULX3 412 aaKnown RBP15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 STAMBPO95630 424 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 TUBB4BP68371 445 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 HLTFQ14527 1009 aaKnown RBP eCLIP15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
PCDHGA3-201ENST00000253812 ANKLE2Q86XL3 938 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 FANCAO15360 1455 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 RAD21O60216 631 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 KIF5BP33176 963 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 CCDC12Q8WUD4 166 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 CDKL5O76039 1030 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 KRT18P05783 430 aaKnown RBP15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 ATRIPQ8WXE1 791 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 TSR2Q969E8 191 aaKnown RBP15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 HSF2BPO75031 334 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 TMC6Q7Z403 805 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 NBPF11Q86T75 865 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 CKAP2LQ8IYA6 745 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 KLHL34Q8N239 644 aa15.25■□□□□ 0.03
PCDHGA3-201ENST00000253812 CCDC121Q6ZUS5 278 aa15.24■□□□□ 0.03
PCDHGA3-201ENST00000253812 NOL7Q9UMY1 257 aaKnown RBP15.24■□□□□ 0.03
PCDHGA3-201ENST00000253812 HCLS1P14317 486 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA3-201ENST00000253812 MAATS1Q7Z4T9 603 aa15.24■□□□□ 0.03
PCDHGA3-201ENST00000253812 KDM4AO75164 1064 aa15.24■□□□□ 0.03
PCDHGA3-201ENST00000253812 WDR63Q8IWG1 891 aa15.24■□□□□ 0.03
PCDHGA3-201ENST00000253812 SH2B1Q9NRF2 756 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA3-201ENST00000253812 OPA1O60313 960 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 ATP2C2O75185 946 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 TUBBP07437 444 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 SKILP12757 684 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 NUP153P49790 1475 aaKnown RBP15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 ZSWIM4Q9H7M6 989 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 RRAGDQ9NQL2 400 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 YEATS4O95619 227 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 UBE2HP62256 183 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 STX1AQ16623 288 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 HYPKQ9NX55 129 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 POGZQ7Z3K3 1410 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 ZNF830Q96NB3 372 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 TBC1D32Q96NH3 1257 aa15.23■□□□□ 0.03
PCDHGA3-201ENST00000253812 ATAD2Q6PL18 1390 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 RRS1Q15050 365 aaKnown RBP15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 BANK1Q8NDB2 785 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 CCDC61Q9Y6R9 512 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 CETN2P41208 172 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 UBE4AQ14139 1066 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 CCDC186Q7Z3E2 898 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 VPS37DQ86XT2 251 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 FAM114A1Q8IWE2 563 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 GSTTP1A0A1W2PQM5 241 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 CTAGE15A4D2H0 777 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 CTAGE8P0CG41 777 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 AIMP1Q12904 312 aaKnown RBP15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 CTAGE6Q86UF2 777 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 CTAGE4Q8IX94 777 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 CCDC114Q96M63 670 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 NSRP1Q9H0G5 558 aaKnown RBP15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 DNAI1Q9UI46 699 aa15.22■□□□□ 0.03
PCDHGA3-201ENST00000253812 TWISTNBQ3B726 338 aaPredicted RBP15.21■□□□□ 0.03
PCDHGA3-201ENST00000253812 NUP133Q8WUM0 1156 aa15.21■□□□□ 0.03
PCDHGA3-201ENST00000253812 TAOK3Q9H2K8 898 aa15.21■□□□□ 0.03
PCDHGA3-201ENST00000253812 CEBPAP49715 358 aaPredicted RBP15.21■□□□□ 0.03
PCDHGA3-201ENST00000253812 GAS2L2Q8NHY3 880 aa15.21■□□□□ 0.03
PCDHGA3-201ENST00000253812 NUDT16Q96DE0 195 aaKnown RBP15.21■□□□□ 0.03
PCDHGA3-201ENST00000253812 TTC12Q9H892 705 aaPredicted RBP15.21■□□□□ 0.03
PCDHGA3-201ENST00000253812 TBC1D2BQ9UPU7 963 aa15.21■□□□□ 0.03
PCDHGA3-201ENST00000253812 RPRD2Q5VT52 1461 aaKnown RBP15.21■□□□□ 0.03
PCDHGA3-201ENST00000253812 CKAP4Q07065 602 aaKnown RBP15.21■□□□□ 0.02
PCDHGA3-201ENST00000253812 KRBA2Q6ZNG9 492 aa15.21■□□□□ 0.02
PCDHGA3-201ENST00000253812 ANKS4BQ8N8V4 417 aa15.21■□□□□ 0.02
PCDHGA3-201ENST00000253812 EHBP1Q8NDI1 1231 aa15.21■□□□□ 0.02
PCDHGA3-201ENST00000253812 DRC1Q96MC2 740 aa15.21■□□□□ 0.02
PCDHGA3-201ENST00000253812 ALS2CR12Q96Q35 445 aa15.21■□□□□ 0.02
PCDHGA3-201ENST00000253812 MYCBPQ99417 103 aaPredicted RBP15.21■□□□□ 0.02
PCDHGA3-201ENST00000253812 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.02
PCDHGA3-201ENST00000253812 SWAP70Q9UH65 585 aa15.21■□□□□ 0.02
PCDHGA3-201ENST00000253812 NSD3Q9BZ95 1437 aa15.2■□□□□ 0.02
PCDHGA3-201ENST00000253812 RPAP2Q8IXW5 612 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms