RNA–Protein interactions for RNA: ENST00000249363.3

LRRC4-201, Transcript of leucine rich repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC4, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4-201ENST00000249363 NOB1Q9ULX3 412 aaKnown RBP11.75□□□□□ -0.53
LRRC4-201ENST00000249363 CCDC9Q9Y3X0 531 aaKnown RBP11.75□□□□□ -0.53
LRRC4-201ENST00000249363 TRIM27P14373 513 aa11.74□□□□□ -0.53
LRRC4-201ENST00000249363 SEPT12Q8IYM1 358 aa11.74□□□□□ -0.53
LRRC4-201ENST00000249363 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
LRRC4-201ENST00000249363 ASAP1Q9ULH1 1129 aa11.74□□□□□ -0.53
LRRC4-201ENST00000249363 ATF7IPQ6VMQ6 1270 aa11.73□□□□□ -0.53
LRRC4-201ENST00000249363 TMOD3Q9NYL9 352 aa11.73□□□□□ -0.53
LRRC4-201ENST00000249363 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
LRRC4-201ENST00000249363 PRIM1P49642 420 aaKnown RBP11.73□□□□□ -0.53
LRRC4-201ENST00000249363 RBM6P78332 1123 aaKnown RBP11.73□□□□□ -0.53
LRRC4-201ENST00000249363 FKBP8Q14318 412 aa11.73□□□□□ -0.53
LRRC4-201ENST00000249363 ANKRD36CQ5JPF3 1778 aa11.73□□□□□ -0.53
LRRC4-201ENST00000249363 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
LRRC4-201ENST00000249363 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
LRRC4-201ENST00000249363 G2E3Q7L622 706 aa11.73□□□□□ -0.53
LRRC4-201ENST00000249363 PTPRCP08575 1304 aa11.72□□□□□ -0.53
LRRC4-201ENST00000249363 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
LRRC4-201ENST00000249363 IRX6P78412 446 aaPredicted RBP11.72□□□□□ -0.53
LRRC4-201ENST00000249363 ZKSCAN2Q63HK3 967 aa11.72□□□□□ -0.53
LRRC4-201ENST00000249363 SNRPA1P09661 255 aaKnown RBP11.72□□□□□ -0.53
LRRC4-201ENST00000249363 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.72□□□□□ -0.53
LRRC4-201ENST00000249363 KCNQ2O43526 872 aa11.71□□□□□ -0.53
LRRC4-201ENST00000249363 PTF1AQ7RTS3 328 aa11.71□□□□□ -0.53
LRRC4-201ENST00000249363 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
LRRC4-201ENST00000249363 CAPN15O75808 1086 aa11.71□□□□□ -0.53
LRRC4-201ENST00000249363 CRBNQ96SW2 442 aa11.71□□□□□ -0.53
LRRC4-201ENST00000249363 ERBB4Q15303 1308 aa11.71□□□□□ -0.54
LRRC4-201ENST00000249363 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.54
LRRC4-201ENST00000249363 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.54
LRRC4-201ENST00000249363 POTEAQ6S8J7 498 aa11.71□□□□□ -0.54
LRRC4-201ENST00000249363 EXOC6Q8TAG9 804 aa11.71□□□□□ -0.54
LRRC4-201ENST00000249363 AFDNP55196 1824 aaKnown RBP11.7□□□□□ -0.54
LRRC4-201ENST00000249363 TCERG1O14776 1098 aaKnown RBP11.7□□□□□ -0.54
LRRC4-201ENST00000249363 PROSER3Q2NL68 480 aa11.7□□□□□ -0.54
LRRC4-201ENST00000249363 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
LRRC4-201ENST00000249363 CHPF2Q9P2E5 772 aa11.7□□□□□ -0.54
LRRC4-201ENST00000249363 ADCY9O60503 1353 aa11.7□□□□□ -0.54
LRRC4-201ENST00000249363 ATP10DQ9P241 1426 aa11.7□□□□□ -0.54
LRRC4-201ENST00000249363 PANK1Q8TE04 598 aa11.7□□□□□ -0.54
LRRC4-201ENST00000249363 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
LRRC4-201ENST00000249363 DDX21Q9NR30 783 aaKnown RBP eCLIP11.69□□□□□ -0.54
LRRC4-201ENST00000249363 NUP98P52948 1817 aa11.69□□□□□ -0.54
LRRC4-201ENST00000249363 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
LRRC4-201ENST00000249363 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
LRRC4-201ENST00000249363 INTS3Q68E01 1043 aaKnown RBP11.69□□□□□ -0.54
LRRC4-201ENST00000249363 NBPF10Q6P3W6 841 aaKnown RBP11.69□□□□□ -0.54
LRRC4-201ENST00000249363 NBPF15Q8N660 670 aa11.69□□□□□ -0.54
LRRC4-201ENST00000249363 UBR3Q6ZT12 1888 aa11.69□□□□□ -0.54
LRRC4-201ENST00000249363 DZIP1LQ8IYY4 767 aaKnown RBP11.69□□□□□ -0.54
LRRC4-201ENST00000249363 PHAXQ9H814 394 aaKnown RBP11.69□□□□□ -0.54
LRRC4-201ENST00000249363 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
LRRC4-201ENST00000249363 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
LRRC4-201ENST00000249363 FLIIQ13045 1269 aa11.68□□□□□ -0.54
LRRC4-201ENST00000249363 ACSBG1Q96GR2 724 aa11.68□□□□□ -0.54
LRRC4-201ENST00000249363 DBF4Q9UBU7 674 aaPredicted RBP11.68□□□□□ -0.54
LRRC4-201ENST00000249363 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
LRRC4-201ENST00000249363 TUBGCP6Q96RT7 1819 aa11.68□□□□□ -0.54
LRRC4-201ENST00000249363 PALLDQ8WX93 1383 aa11.68□□□□□ -0.54
LRRC4-201ENST00000249363 IPO8O15397 1037 aaKnown RBP11.68□□□□□ -0.54
LRRC4-201ENST00000249363 MVPQ14764 893 aaKnown RBP11.68□□□□□ -0.54
LRRC4-201ENST00000249363 FRAT1Q92837 279 aaPredicted RBP11.68□□□□□ -0.54
LRRC4-201ENST00000249363 CHMP4AQ9BY43 222 aa11.68□□□□□ -0.54
LRRC4-201ENST00000249363 TMEM57Q8N5G2 664 aa11.67□□□□□ -0.54
LRRC4-201ENST00000249363 CYP19A1P11511 503 aaPredicted RBP11.67□□□□□ -0.54
LRRC4-201ENST00000249363 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
LRRC4-201ENST00000249363 KRT27Q7Z3Y8 459 aa11.67□□□□□ -0.54
LRRC4-201ENST00000249363 NEFLP07196 543 aa11.66□□□□□ -0.54
LRRC4-201ENST00000249363 MS4A1P11836 297 aa11.66□□□□□ -0.54
LRRC4-201ENST00000249363 FAM182BQ5T319 152 aa11.66□□□□□ -0.54
LRRC4-201ENST00000249363 HYPKQ9NX55 129 aa11.66□□□□□ -0.54
LRRC4-201ENST00000249363 NECTIN2Q92692 538 aa11.66□□□□□ -0.54
LRRC4-201ENST00000249363 STK31Q9BXU1 1019 aa11.66□□□□□ -0.54
LRRC4-201ENST00000249363 QSER1Q2KHR3 1735 aa11.66□□□□□ -0.54
LRRC4-201ENST00000249363 CASZ1Q86V15 1759 aa11.66□□□□□ -0.54
LRRC4-201ENST00000249363 ZBTB7BO15156 539 aaPredicted RBP11.65□□□□□ -0.54
LRRC4-201ENST00000249363 EIF2S2P20042 333 aaKnown RBP11.65□□□□□ -0.54
LRRC4-201ENST00000249363 RXRBP28702 533 aa11.65□□□□□ -0.54
LRRC4-201ENST00000249363 ITPK1Q13572 414 aa11.65□□□□□ -0.54
LRRC4-201ENST00000249363 DNAJC10Q8IXB1 793 aa11.65□□□□□ -0.54
LRRC4-201ENST00000249363 BCL11BQ9C0K0 894 aaPredicted RBP11.65□□□□□ -0.54
LRRC4-201ENST00000249363 COG6Q9Y2V7 657 aa11.65□□□□□ -0.54
LRRC4-201ENST00000249363 TEX13AQ9BXU3 409 aaPredicted RBP11.65□□□□□ -0.54
LRRC4-201ENST00000249363 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
LRRC4-201ENST00000249363 ANXA1P04083 346 aa11.65□□□□□ -0.54
LRRC4-201ENST00000249363 AAMPQ13685 434 aa11.65□□□□□ -0.54
LRRC4-201ENST00000249363 ZBTB40Q9NUA8 1239 aa11.65□□□□□ -0.54
LRRC4-201ENST00000249363 PPP4R2Q9NY27 417 aa11.65□□□□□ -0.54
LRRC4-201ENST00000249363 INTS5Q6P9B9 1019 aaKnown RBP11.64□□□□□ -0.55
LRRC4-201ENST00000249363 SMARCC1Q92922 1105 aaPredicted RBP11.64□□□□□ -0.55
LRRC4-201ENST00000249363 LOC102724428A0A0B4J2F2 783 aa11.64□□□□□ -0.55
LRRC4-201ENST00000249363 SIK1P57059 783 aa11.64□□□□□ -0.55
LRRC4-201ENST00000249363 FAM196AQ6ZSG2 479 aa11.64□□□□□ -0.55
LRRC4-201ENST00000249363 CLUAP1Q96AJ1 413 aa11.64□□□□□ -0.55
LRRC4-201ENST00000249363 COL24A1Q17RW2 1714 aa11.64□□□□□ -0.55
LRRC4-201ENST00000249363 A1BGP04217 495 aa11.63□□□□□ -0.55
LRRC4-201ENST00000249363 LAMB2P55268 1798 aa11.63□□□□□ -0.55
LRRC4-201ENST00000249363 KDM2BQ8NHM5 1336 aa11.63□□□□□ -0.55
LRRC4-201ENST00000249363 ABCB7O75027 752 aa11.63□□□□□ -0.55
LRRC4-201ENST00000249363 BEND3Q5T5X7 828 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms