RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
LSM8-201ENST00000249299 HDGFL1Q5TGJ6 251 aa16.54■□□□□ 0.24
LSM8-201ENST00000249299 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
LSM8-201ENST00000249299 ATG3Q9NT62 314 aa16.54■□□□□ 0.24
LSM8-201ENST00000249299 PTPRCP08575 1304 aa16.54■□□□□ 0.24
LSM8-201ENST00000249299 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
LSM8-201ENST00000249299 DBF4Q9UBU7 674 aaPredicted RBP16.53■□□□□ 0.24
LSM8-201ENST00000249299 AAMPQ13685 434 aa16.52■□□□□ 0.24
LSM8-201ENST00000249299 ATF7IPQ6VMQ6 1270 aa16.52■□□□□ 0.24
LSM8-201ENST00000249299 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.24
LSM8-201ENST00000249299 API5Q9BZZ5 524 aaKnown RBP16.52■□□□□ 0.24
LSM8-201ENST00000249299 ASAP1Q9ULH1 1129 aa16.52■□□□□ 0.24
LSM8-201ENST00000249299 KCPQ6ZWJ8 1503 aa16.52■□□□□ 0.23
LSM8-201ENST00000249299 CANXP27824 592 aaKnown RBP16.51■□□□□ 0.23
LSM8-201ENST00000249299 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
LSM8-201ENST00000249299 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
LSM8-201ENST00000249299 BCL11BQ9C0K0 894 aaPredicted RBP16.5■□□□□ 0.23
LSM8-201ENST00000249299 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
LSM8-201ENST00000249299 NOB1Q9ULX3 412 aaKnown RBP16.5■□□□□ 0.23
LSM8-201ENST00000249299 STARD3NLO95772 234 aa16.49■□□□□ 0.23
LSM8-201ENST00000249299 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
LSM8-201ENST00000249299 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
LSM8-201ENST00000249299 POTEAQ6S8J7 498 aa16.48■□□□□ 0.23
LSM8-201ENST00000249299 FRAT1Q92837 279 aaPredicted RBP16.48■□□□□ 0.23
LSM8-201ENST00000249299 ACSBG1Q96GR2 724 aa16.48■□□□□ 0.23
LSM8-201ENST00000249299 ITGB4P16144 1822 aa16.48■□□□□ 0.23
LSM8-201ENST00000249299 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
LSM8-201ENST00000249299 TRIM27P14373 513 aa16.47■□□□□ 0.23
LSM8-201ENST00000249299 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
LSM8-201ENST00000249299 ILDR1Q86SU0 546 aaPredicted RBP16.47■□□□□ 0.23
LSM8-201ENST00000249299 DZIP1LQ8IYY4 767 aaKnown RBP16.47■□□□□ 0.23
LSM8-201ENST00000249299 CHMP4BQ9H444 224 aaKnown RBP16.47■□□□□ 0.23
LSM8-201ENST00000249299 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
LSM8-201ENST00000249299 LOC102724428A0A0B4J2F2 783 aa16.46■□□□□ 0.23
LSM8-201ENST00000249299 KCNQ2O43526 872 aa16.46■□□□□ 0.23
LSM8-201ENST00000249299 PLIN1O60240 522 aa16.46■□□□□ 0.23
LSM8-201ENST00000249299 SIK1P57059 783 aa16.46■□□□□ 0.23
LSM8-201ENST00000249299 FLIIQ13045 1269 aa16.46■□□□□ 0.23
LSM8-201ENST00000249299 PROM2Q8N271 834 aa16.46■□□□□ 0.23
LSM8-201ENST00000249299 PALLDQ8WX93 1383 aa16.46■□□□□ 0.23
LSM8-201ENST00000249299 NHSQ6T4R5 1651 aa16.46■□□□□ 0.23
LSM8-201ENST00000249299 PDIA6Q15084 440 aa16.45■□□□□ 0.22
LSM8-201ENST00000249299 FTSJ3Q8IY81 847 aaKnown RBP16.45■□□□□ 0.22
LSM8-201ENST00000249299 CHPF2Q9P2E5 772 aa16.45■□□□□ 0.22
LSM8-201ENST00000249299 RGS12O14924 1447 aa16.45■□□□□ 0.22
LSM8-201ENST00000249299 CACNA1FO60840 1977 aa16.45■□□□□ 0.22
LSM8-201ENST00000249299 ABCC4O15439 1325 aa16.44■□□□□ 0.22
LSM8-201ENST00000249299 CICQ96RK0 1608 aaPredicted RBP16.44■□□□□ 0.22
LSM8-201ENST00000249299 ZNF831Q5JPB2 1677 aa16.44■□□□□ 0.22
LSM8-201ENST00000249299 IBTKQ9P2D0 1353 aaPredicted RBP16.44■□□□□ 0.22
LSM8-201ENST00000249299 PRAMEF22A3QJZ6 481 aa16.44■□□□□ 0.22
LSM8-201ENST00000249299 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
LSM8-201ENST00000249299 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
LSM8-201ENST00000249299 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
LSM8-201ENST00000249299 CYP19A1P11511 503 aaPredicted RBP16.43■□□□□ 0.22
LSM8-201ENST00000249299 INTS3Q68E01 1043 aaKnown RBP16.43■□□□□ 0.22
LSM8-201ENST00000249299 LRP10Q7Z4F1 713 aa16.43■□□□□ 0.22
LSM8-201ENST00000249299 SLC4A9Q96Q91 983 aa16.43■□□□□ 0.22
LSM8-201ENST00000249299 TCERG1O14776 1098 aaKnown RBP16.42■□□□□ 0.22
LSM8-201ENST00000249299 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
LSM8-201ENST00000249299 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
LSM8-201ENST00000249299 DDX19BQ9UMR2 479 aa16.42■□□□□ 0.22
LSM8-201ENST00000249299 LAMB4A4D0S4 1761 aa16.42■□□□□ 0.22
LSM8-201ENST00000249299 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
LSM8-201ENST00000249299 CCT4P50991 539 aaKnown RBP16.41■□□□□ 0.22
LSM8-201ENST00000249299 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
LSM8-201ENST00000249299 RC3H1Q5TC82 1133 aaKnown RBP16.41■□□□□ 0.22
LSM8-201ENST00000249299 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
LSM8-201ENST00000249299 G2E3Q7L622 706 aa16.41■□□□□ 0.22
LSM8-201ENST00000249299 DNAJC10Q8IXB1 793 aa16.41■□□□□ 0.22
LSM8-201ENST00000249299 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
LSM8-201ENST00000249299 PXDNLA1KZ92 1463 aa16.4■□□□□ 0.22
LSM8-201ENST00000249299 PLSCR1O15162 318 aa16.4■□□□□ 0.22
LSM8-201ENST00000249299 FAM182BQ5T319 152 aa16.4■□□□□ 0.22
LSM8-201ENST00000249299 KSR2Q6VAB6 950 aa16.4■□□□□ 0.22
LSM8-201ENST00000249299 RGL2O15211 777 aa16.39■□□□□ 0.21
LSM8-201ENST00000249299 RLBP1P12271 317 aa16.39■□□□□ 0.21
LSM8-201ENST00000249299 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
LSM8-201ENST00000249299 PANK1Q8TE04 598 aa16.39■□□□□ 0.21
LSM8-201ENST00000249299 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
LSM8-201ENST00000249299 C5P01031 1676 aa16.39■□□□□ 0.21
LSM8-201ENST00000249299 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 A1BGP04217 495 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 PROSER3Q2NL68 480 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 NBPF14Q5TI25 921 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
LSM8-201ENST00000249299 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 DNAAF4Q8WXU2 420 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 CLUAP1Q96AJ1 413 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
LSM8-201ENST00000249299 SBF2Q86WG5 1849 aa16.37■□□□□ 0.21
LSM8-201ENST00000249299 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
LSM8-201ENST00000249299 TRIM37O94972 964 aa16.37■□□□□ 0.21
LSM8-201ENST00000249299 COPS6Q7L5N1 327 aa16.37■□□□□ 0.21
LSM8-201ENST00000249299 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
LSM8-201ENST00000249299 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
LSM8-201ENST00000249299 PLBD2Q8NHP8 589 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms