RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 SOS1Q07889 1333 aaPredicted RBP17.37■□□□□ 0.37
APOBEC3A-201ENST00000249116 GOLGB1Q14789 3259 aaKnown RBP17.36■□□□□ 0.37
APOBEC3A-201ENST00000249116 DDR1Q08345 913 aa17.36■□□□□ 0.37
APOBEC3A-201ENST00000249116 USPL1Q5W0Q7 1092 aa17.36■□□□□ 0.37
APOBEC3A-201ENST00000249116 COL3A1P02461 1466 aaPredicted RBP17.35■□□□□ 0.37
APOBEC3A-201ENST00000249116 KCPQ6ZWJ8 1503 aa17.35■□□□□ 0.37
APOBEC3A-201ENST00000249116 ADAMTS7Q9UKP4 1686 aa17.35■□□□□ 0.37
APOBEC3A-201ENST00000249116 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
APOBEC3A-201ENST00000249116 POLRMTO00411 1230 aaKnown RBP17.34■□□□□ 0.37
APOBEC3A-201ENST00000249116 KCNA3P22001 575 aa17.34■□□□□ 0.37
APOBEC3A-201ENST00000249116 TM4SF1P30408 202 aa17.34■□□□□ 0.37
APOBEC3A-201ENST00000249116 COL15A1P39059 1388 aa17.34■□□□□ 0.37
APOBEC3A-201ENST00000249116 TEFQ10587 303 aa17.34■□□□□ 0.37
APOBEC3A-201ENST00000249116 CFAP53Q96M91 514 aa17.34■□□□□ 0.37
APOBEC3A-201ENST00000249116 NARFQ9UHQ1 456 aa17.34■□□□□ 0.37
APOBEC3A-201ENST00000249116 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
APOBEC3A-201ENST00000249116 DALRD3Q5D0E6 543 aaKnown RBP17.33■□□□□ 0.36
APOBEC3A-201ENST00000249116 STARD3NLO95772 234 aa17.32■□□□□ 0.36
APOBEC3A-201ENST00000249116 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
APOBEC3A-201ENST00000249116 CANXP27824 592 aaKnown RBP17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 VIRMAQ69YN4 1812 aaKnown RBP17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 A0A087WZG4 1122 aa17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 KIF3CO14782 793 aa17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 HSPA6P17066 643 aa17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 CHRNA5P30532 468 aa17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 NFIXQ14938 502 aa17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
APOBEC3A-201ENST00000249116 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
APOBEC3A-201ENST00000249116 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
APOBEC3A-201ENST00000249116 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
APOBEC3A-201ENST00000249116 SERPINB2P05120 415 aa17.28■□□□□ 0.36
APOBEC3A-201ENST00000249116 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
APOBEC3A-201ENST00000249116 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
APOBEC3A-201ENST00000249116 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
APOBEC3A-201ENST00000249116 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.35
APOBEC3A-201ENST00000249116 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.35
APOBEC3A-201ENST00000249116 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.35
APOBEC3A-201ENST00000249116 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.35
APOBEC3A-201ENST00000249116 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.35
APOBEC3A-201ENST00000249116 BCL2L12Q9HB09 334 aa17.27■□□□□ 0.35
APOBEC3A-201ENST00000249116 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.35
APOBEC3A-201ENST00000249116 ARFGEF1Q9Y6D6 1849 aa17.27■□□□□ 0.35
APOBEC3A-201ENST00000249116 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
APOBEC3A-201ENST00000249116 TOMM70O94826 608 aa17.25■□□□□ 0.35
APOBEC3A-201ENST00000249116 PHACTR3Q96KR7 559 aa17.25■□□□□ 0.35
APOBEC3A-201ENST00000249116 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
APOBEC3A-201ENST00000249116 ZNF330Q9Y3S2 320 aaPredicted RBP17.25■□□□□ 0.35
APOBEC3A-201ENST00000249116 CEMIPQ8WUJ3 1361 aa17.25■□□□□ 0.35
APOBEC3A-201ENST00000249116 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
APOBEC3A-201ENST00000249116 IL6STP40189 918 aaPredicted RBP17.24■□□□□ 0.35
APOBEC3A-201ENST00000249116 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
APOBEC3A-201ENST00000249116 BICDL1Q6ZP65 573 aa17.24■□□□□ 0.35
APOBEC3A-201ENST00000249116 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
APOBEC3A-201ENST00000249116 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
APOBEC3A-201ENST00000249116 KDM2BQ8NHM5 1336 aa17.23■□□□□ 0.35
APOBEC3A-201ENST00000249116 NRXN2Q9P2S2 1712 aa17.23■□□□□ 0.35
APOBEC3A-201ENST00000249116 H0YIN7 160 aa17.22■□□□□ 0.35
APOBEC3A-201ENST00000249116 C2CD5Q86YS7 1000 aa17.22■□□□□ 0.35
APOBEC3A-201ENST00000249116 TTLL6Q8N841 843 aa17.22■□□□□ 0.35
APOBEC3A-201ENST00000249116 NMRK2Q9NPI5 230 aa17.22■□□□□ 0.35
APOBEC3A-201ENST00000249116 C16orf71Q8IYS4 520 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3A-201ENST00000249116 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.35
APOBEC3A-201ENST00000249116 SIPA1L3O60292 1781 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3A-201ENST00000249116 AFDNP55196 1824 aaKnown RBP17.21■□□□□ 0.35
APOBEC3A-201ENST00000249116 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.34
APOBEC3A-201ENST00000249116 PDZRN3Q9UPQ7 1066 aa17.21■□□□□ 0.34
APOBEC3A-201ENST00000249116 A1BGP04217 495 aa17.2■□□□□ 0.34
APOBEC3A-201ENST00000249116 PDE6BP35913 854 aa17.2■□□□□ 0.34
APOBEC3A-201ENST00000249116 APLP1P51693 650 aa17.2■□□□□ 0.34
APOBEC3A-201ENST00000249116 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
APOBEC3A-201ENST00000249116 NPHP1O15259 732 aa17.19■□□□□ 0.34
APOBEC3A-201ENST00000249116 KCNQ3O43525 872 aa17.19■□□□□ 0.34
APOBEC3A-201ENST00000249116 ZC3H4Q9UPT8 1303 aaKnown RBP17.19■□□□□ 0.34
APOBEC3A-201ENST00000249116 HTATSF1O43719 755 aaKnown RBP17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 NEFMP07197 916 aa17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 LMNB1P20700 586 aa17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 RASSF7Q02833 373 aa17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 MCM10Q7L590 875 aa17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 DZIP3Q86Y13 1208 aaKnown RBP17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 SETDB2Q96T68 719 aa17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 BRIP1Q9BX63 1249 aa17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 SCN7AQ01118 1682 aa17.18■□□□□ 0.34
APOBEC3A-201ENST00000249116 SNRPA1P09661 255 aaKnown RBP17.17■□□□□ 0.34
APOBEC3A-201ENST00000249116 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
APOBEC3A-201ENST00000249116 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
APOBEC3A-201ENST00000249116 CAMTA2O94983 1202 aa17.16■□□□□ 0.34
APOBEC3A-201ENST00000249116 PRR5LQ6MZQ0 368 aa17.16■□□□□ 0.34
APOBEC3A-201ENST00000249116 DLEC1Q9Y238 1755 aa17.16■□□□□ 0.34
APOBEC3A-201ENST00000249116 ST5P78524 1137 aa17.15■□□□□ 0.34
APOBEC3A-201ENST00000249116 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
APOBEC3A-201ENST00000249116 RRAGCQ9HB90 399 aa17.15■□□□□ 0.34
APOBEC3A-201ENST00000249116 FSTL1Q12841 308 aa17.14■□□□□ 0.33
APOBEC3A-201ENST00000249116 ZNF652Q9Y2D9 606 aa17.14■□□□□ 0.33
APOBEC3A-201ENST00000249116 DCTN1Q14203 1278 aa17.13■□□□□ 0.33
APOBEC3A-201ENST00000249116 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
APOBEC3A-201ENST00000249116 CLEC4GQ6UXB4 293 aa17.13■□□□□ 0.33
APOBEC3A-201ENST00000249116 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms