RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 SMTNL1A8MU46 457 aa11.82□□□□□ -0.52
SIX1-201ENST00000247182 H0YHG0 523 aa11.82□□□□□ -0.52
SIX1-201ENST00000247182 PDLIM2Q96JY6 352 aa11.82□□□□□ -0.52
SIX1-201ENST00000247182 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
SIX1-201ENST00000247182 SURF6O75683 361 aaKnown RBP11.81□□□□□ -0.52
SIX1-201ENST00000247182 URI1O94763 535 aaPredicted RBP11.81□□□□□ -0.52
SIX1-201ENST00000247182 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
SIX1-201ENST00000247182 WASLO00401 505 aaPredicted RBP11.81□□□□□ -0.52
SIX1-201ENST00000247182 LUZP1Q86V48 1076 aa11.81□□□□□ -0.52
SIX1-201ENST00000247182 CCDC34Q96HJ3 373 aa11.81□□□□□ -0.52
SIX1-201ENST00000247182 NLRP6P59044 892 aa11.81□□□□□ -0.52
SIX1-201ENST00000247182 HSP90AB3PQ58FF7 597 aa11.81□□□□□ -0.52
SIX1-201ENST00000247182 EIF4A2Q14240 407 aaKnown RBP11.8□□□□□ -0.52
SIX1-201ENST00000247182 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
SIX1-201ENST00000247182 MX1P20591 662 aa11.8□□□□□ -0.52
SIX1-201ENST00000247182 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
SIX1-201ENST00000247182 KIF2CQ99661 725 aa11.8□□□□□ -0.52
SIX1-201ENST00000247182 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
SIX1-201ENST00000247182 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.8□□□□□ -0.52
SIX1-201ENST00000247182 IL16Q14005 1332 aa11.8□□□□□ -0.52
SIX1-201ENST00000247182 IL13P35225 146 aa11.8□□□□□ -0.52
SIX1-201ENST00000247182 CREBRFQ8IUR6 639 aa11.8□□□□□ -0.52
SIX1-201ENST00000247182 HDAC5Q9UQL6 1122 aa11.8□□□□□ -0.52
SIX1-201ENST00000247182 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
SIX1-201ENST00000247182 CEP85Q6P2H3 762 aa11.79□□□□□ -0.52
SIX1-201ENST00000247182 TFIP11Q9UBB9 837 aaKnown RBP11.79□□□□□ -0.52
SIX1-201ENST00000247182 TERF2Q15554 542 aa11.79□□□□□ -0.52
SIX1-201ENST00000247182 ZSWIM4Q9H7M6 989 aa11.79□□□□□ -0.52
SIX1-201ENST00000247182 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
SIX1-201ENST00000247182 SKILP12757 684 aa11.79□□□□□ -0.52
SIX1-201ENST00000247182 CPA1P15085 419 aa11.79□□□□□ -0.52
SIX1-201ENST00000247182 HNRNPH2P55795 449 aaKnown RBP11.79□□□□□ -0.52
SIX1-201ENST00000247182 SDF4Q9BRK5 362 aa11.79□□□□□ -0.52
SIX1-201ENST00000247182 USP26Q9BXU7 913 aa11.79□□□□□ -0.52
SIX1-201ENST00000247182 CHD1O14646 1710 aa11.79□□□□□ -0.52
SIX1-201ENST00000247182 ARHGAP29Q52LW3 1261 aa11.78□□□□□ -0.52
SIX1-201ENST00000247182 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
SIX1-201ENST00000247182 ZNF165P49910 485 aa11.78□□□□□ -0.52
SIX1-201ENST00000247182 AIMP1Q12904 312 aaKnown RBP11.78□□□□□ -0.52
SIX1-201ENST00000247182 PDILTQ8N807 584 aa11.78□□□□□ -0.52
SIX1-201ENST00000247182 DCTPP1Q9H773 170 aa11.78□□□□□ -0.52
SIX1-201ENST00000247182 ABCA6Q8N139 1617 aa11.78□□□□□ -0.52
SIX1-201ENST00000247182 CCDC83Q8IWF9 413 aa11.78□□□□□ -0.52
SIX1-201ENST00000247182 NSD2O96028 1365 aa11.78□□□□□ -0.52
SIX1-201ENST00000247182 GNAI2P04899 355 aa11.77□□□□□ -0.52
SIX1-201ENST00000247182 TXLNBQ8N3L3 684 aa11.77□□□□□ -0.52
SIX1-201ENST00000247182 ST7Q9NRC1 585 aa11.77□□□□□ -0.52
SIX1-201ENST00000247182 ZCCHC11Q5TAX3 1644 aaKnown RBP11.77□□□□□ -0.52
SIX1-201ENST00000247182 SLU7O95391 586 aaKnown RBP11.77□□□□□ -0.52
SIX1-201ENST00000247182 MNAT1P51948 309 aa11.77□□□□□ -0.52
SIX1-201ENST00000247182 KRT85P78386 507 aa11.77□□□□□ -0.52
SIX1-201ENST00000247182 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.52
SIX1-201ENST00000247182 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.52
SIX1-201ENST00000247182 UBE2HP62256 183 aa11.77□□□□□ -0.53
SIX1-201ENST00000247182 NCBP1Q09161 790 aaKnown RBP11.77□□□□□ -0.53
SIX1-201ENST00000247182 CWC27Q6UX04 472 aaKnown RBP11.77□□□□□ -0.53
SIX1-201ENST00000247182 SPG7Q9UQ90 795 aa11.77□□□□□ -0.53
SIX1-201ENST00000247182 MSH6P52701 1360 aa11.77□□□□□ -0.53
SIX1-201ENST00000247182 PPFIA3O75145 1194 aa11.77□□□□□ -0.53
SIX1-201ENST00000247182 UBTFL1P0CB47 393 aaPredicted RBP11.77□□□□□ -0.53
SIX1-201ENST00000247182 STK3Q13188 491 aa11.77□□□□□ -0.53
SIX1-201ENST00000247182 ANO6Q4KMQ2 910 aa11.77□□□□□ -0.53
SIX1-201ENST00000247182 LRRCC1Q9C099 1032 aa11.77□□□□□ -0.53
SIX1-201ENST00000247182 PLXNC1O60486 1568 aa11.77□□□□□ -0.53
SIX1-201ENST00000247182 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
SIX1-201ENST00000247182 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
SIX1-201ENST00000247182 SECISBP2LQ93073 1101 aaKnown RBP11.76□□□□□ -0.53
SIX1-201ENST00000247182 YTHDC2Q9H6S0 1430 aaKnown RBP11.76□□□□□ -0.53
SIX1-201ENST00000247182 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
SIX1-201ENST00000247182 PDE1AP54750 535 aa11.76□□□□□ -0.53
SIX1-201ENST00000247182 PALD1Q9ULE6 856 aa11.76□□□□□ -0.53
SIX1-201ENST00000247182 SBNO2Q9Y2G9 1366 aa11.76□□□□□ -0.53
SIX1-201ENST00000247182 DNM1Q05193 864 aaKnown RBP11.76□□□□□ -0.53
SIX1-201ENST00000247182 SNW1Q13573 536 aaKnown RBP11.76□□□□□ -0.53
SIX1-201ENST00000247182 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
SIX1-201ENST00000247182 CCDC73Q6ZRK6 1079 aa11.76□□□□□ -0.53
SIX1-201ENST00000247182 SRRTQ9BXP5 876 aaKnown RBP11.76□□□□□ -0.53
SIX1-201ENST00000247182 MAP3K4Q9Y6R4 1608 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 MCM6Q14566 821 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 KIAA1524Q8TCG1 905 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 SPATA32Q96LK8 384 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 TCEANC2Q96MN5 208 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 ACEP12821 1306 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 PHACTR2O75167 634 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 LOC102724159A0A0B4J2E5 919 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 STX6O43752 255 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 PWP2Q15269 919 aaKnown RBP11.75□□□□□ -0.53
SIX1-201ENST00000247182 ERCC6LQ2NKX8 1250 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 FAM200AQ8TCP9 573 aa11.75□□□□□ -0.53
SIX1-201ENST00000247182 CAPN2P17655 700 aa11.74□□□□□ -0.53
SIX1-201ENST00000247182 TTC31Q49AM3 519 aaPredicted RBP11.74□□□□□ -0.53
SIX1-201ENST00000247182 SIL1Q9H173 461 aa11.74□□□□□ -0.53
SIX1-201ENST00000247182 DNAJC25Q9H1X3 360 aa11.74□□□□□ -0.53
SIX1-201ENST00000247182 NRBP1Q9UHY1 535 aa11.74□□□□□ -0.53
SIX1-201ENST00000247182 YEATS2Q9ULM3 1422 aa11.74□□□□□ -0.53
SIX1-201ENST00000247182 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
SIX1-201ENST00000247182 RDXP35241 583 aaKnown RBP11.74□□□□□ -0.53
SIX1-201ENST00000247182 E2F4Q16254 413 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms