RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
NCLN-201ENST00000246117 RBSNQ9H1K0 784 aa16.31■□□□□ 0.2
NCLN-201ENST00000246117 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
NCLN-201ENST00000246117 ATP8B2P98198 1209 aa16.31■□□□□ 0.2
NCLN-201ENST00000246117 CHMLP26374 656 aa16.31■□□□□ 0.2
NCLN-201ENST00000246117 HAND2P61296 217 aa16.31■□□□□ 0.2
NCLN-201ENST00000246117 STX6O43752 255 aa16.3■□□□□ 0.2
NCLN-201ENST00000246117 TRDNQ13061 729 aa16.3■□□□□ 0.2
NCLN-201ENST00000246117 ECHDC1Q9NTX5 307 aa16.3■□□□□ 0.2
NCLN-201ENST00000246117 A0A087WZG4 1122 aa16.3■□□□□ 0.2
NCLN-201ENST00000246117 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
NCLN-201ENST00000246117 DBF4Q9UBU7 674 aaPredicted RBP16.3■□□□□ 0.2
NCLN-201ENST00000246117 HOMER1Q86YM7 354 aa16.3■□□□□ 0.2
NCLN-201ENST00000246117 LTKP29376 864 aa16.29■□□□□ 0.2
NCLN-201ENST00000246117 CHST3Q7LGC8 479 aa16.29■□□□□ 0.2
NCLN-201ENST00000246117 PRDM11Q9NQV5 511 aa16.29■□□□□ 0.2
NCLN-201ENST00000246117 SYNE3Q6ZMZ3 975 aa16.29■□□□□ 0.2
NCLN-201ENST00000246117 UNC5CLQ8IV45 518 aa16.29■□□□□ 0.2
NCLN-201ENST00000246117 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
NCLN-201ENST00000246117 C17orf53Q8N3J3 647 aaPredicted RBP16.29■□□□□ 0.2
NCLN-201ENST00000246117 POGZQ7Z3K3 1410 aa16.29■□□□□ 0.2
NCLN-201ENST00000246117 EDC3Q96F86 508 aaKnown RBP16.29■□□□□ 0.2
NCLN-201ENST00000246117 CCDC192P0DO97 292 aa16.28■□□□□ 0.2
NCLN-201ENST00000246117 AK2P54819 239 aa16.28■□□□□ 0.2
NCLN-201ENST00000246117 KINO60870 393 aaKnown RBP16.28■□□□□ 0.2
NCLN-201ENST00000246117 ISM2Q6H9L7 571 aa16.28■□□□□ 0.2
NCLN-201ENST00000246117 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
NCLN-201ENST00000246117 NUP62CLQ9H1M0 184 aa16.28■□□□□ 0.2
NCLN-201ENST00000246117 HSP90AB3PQ58FF7 597 aa16.28■□□□□ 0.2
NCLN-201ENST00000246117 FAM177A1Q8N128 213 aaPredicted RBP16.28■□□□□ 0.2
NCLN-201ENST00000246117 GADD45BO75293 160 aaPredicted RBP16.27■□□□□ 0.2
NCLN-201ENST00000246117 PDCP20941 246 aa16.27■□□□□ 0.2
NCLN-201ENST00000246117 TPD52L1Q16890 204 aaPredicted RBP16.27■□□□□ 0.2
NCLN-201ENST00000246117 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.2
NCLN-201ENST00000246117 UHRF1BP1LA0JNW5 1464 aa16.27■□□□□ 0.2
NCLN-201ENST00000246117 TNRQ92752 1358 aa16.27■□□□□ 0.2
NCLN-201ENST00000246117 GOLIM4O00461 696 aa16.27■□□□□ 0.2
NCLN-201ENST00000246117 CLCN1P35523 988 aa16.27■□□□□ 0.2
NCLN-201ENST00000246117 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.2
NCLN-201ENST00000246117 TRPM1Q7Z4N2 1603 aa16.27■□□□□ 0.19
NCLN-201ENST00000246117 METP08581 1390 aa16.27■□□□□ 0.19
NCLN-201ENST00000246117 SMC2O95347 1197 aa16.27■□□□□ 0.19
NCLN-201ENST00000246117 ADCY5O95622 1261 aa16.27■□□□□ 0.19
NCLN-201ENST00000246117 GPTP24298 496 aa16.27■□□□□ 0.19
NCLN-201ENST00000246117 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.19
NCLN-201ENST00000246117 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
NCLN-201ENST00000246117 PUS7Q96PZ0 661 aaKnown RBP16.26■□□□□ 0.19
NCLN-201ENST00000246117 STK38Q15208 465 aa16.26■□□□□ 0.19
NCLN-201ENST00000246117 KDM5AP29375 1690 aaKnown RBP16.25■□□□□ 0.19
NCLN-201ENST00000246117 IDH1O75874 414 aaKnown RBP16.25■□□□□ 0.19
NCLN-201ENST00000246117 TPM4P67936 248 aa16.25■□□□□ 0.19
NCLN-201ENST00000246117 NFATC2IPQ8NCF5 419 aa16.25■□□□□ 0.19
NCLN-201ENST00000246117 RBM8AQ9Y5S9 174 aaKnown RBP16.25■□□□□ 0.19
NCLN-201ENST00000246117 ZMYM3Q14202 1370 aa16.25■□□□□ 0.19
NCLN-201ENST00000246117 CNNM1Q9NRU3 951 aa16.25■□□□□ 0.19
NCLN-201ENST00000246117 MYO5CQ9NQX4 1742 aa16.25■□□□□ 0.19
NCLN-201ENST00000246117 HOXC9P31274 260 aa16.25■□□□□ 0.19
NCLN-201ENST00000246117 TTLL5Q6EMB2 1281 aa16.25■□□□□ 0.19
NCLN-201ENST00000246117 ZBTB9Q96C00 473 aa16.25■□□□□ 0.19
NCLN-201ENST00000246117 SYNMO15061 1565 aa16.25■□□□□ 0.19
NCLN-201ENST00000246117 BIN1O00499 593 aa16.24■□□□□ 0.19
NCLN-201ENST00000246117 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
NCLN-201ENST00000246117 ORAI2Q96SN7 254 aa16.24■□□□□ 0.19
NCLN-201ENST00000246117 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
NCLN-201ENST00000246117 CPLX2Q6PUV4 134 aaKnown RBP16.24■□□□□ 0.19
NCLN-201ENST00000246117 CCDC144CPQ8IYA2 1237 aa16.24■□□□□ 0.19
NCLN-201ENST00000246117 ABCC4O15439 1325 aa16.24■□□□□ 0.19
NCLN-201ENST00000246117 PREX2Q70Z35 1606 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 PIK3R4Q99570 1358 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 CDK11BP21127 795 aaKnown RBP16.23■□□□□ 0.19
NCLN-201ENST00000246117 TTC39AQ5SRH9 613 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 PDILTQ8N807 584 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 BRF1Q92994 677 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 TRIM29Q14134 588 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 LRSAM1Q6UWE0 723 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 FAM227BQ96M60 508 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 SBNO2Q9Y2G9 1366 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 MAP3K11Q16584 847 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 CCDC183Q5T5S1 534 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 NBPF6Q5VWK0 638 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 LARP1Q6PKG0 1096 aaKnown RBP16.23■□□□□ 0.19
NCLN-201ENST00000246117 CCDC129Q6ZRS4 1044 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 NBPF4Q96M43 638 aa16.23■□□□□ 0.19
NCLN-201ENST00000246117 TSC1Q92574 1164 aa16.22■□□□□ 0.19
NCLN-201ENST00000246117 USP44Q9H0E7 712 aa16.22■□□□□ 0.19
NCLN-201ENST00000246117 RAD21O60216 631 aa16.22■□□□□ 0.19
NCLN-201ENST00000246117 TPM2P07951 284 aa16.22■□□□□ 0.19
NCLN-201ENST00000246117 NMIQ13287 307 aaPredicted RBP16.22■□□□□ 0.19
NCLN-201ENST00000246117 C16orf45Q96MC5 204 aaPredicted RBP16.22■□□□□ 0.19
NCLN-201ENST00000246117 TRMT1Q9NXH9 659 aaKnown RBP16.22■□□□□ 0.19
NCLN-201ENST00000246117 RTL1A6NKG5 1358 aa16.22■□□□□ 0.19
NCLN-201ENST00000246117 TRPM2O94759 1503 aa16.22■□□□□ 0.19
NCLN-201ENST00000246117 POLR3DP05423 398 aaPredicted RBP16.22■□□□□ 0.19
NCLN-201ENST00000246117 SYT1P21579 422 aa16.22■□□□□ 0.19
NCLN-201ENST00000246117 AKAP17AQ02040 695 aaKnown RBP16.22■□□□□ 0.19
NCLN-201ENST00000246117 KRT28Q7Z3Y7 464 aa16.22■□□□□ 0.19
NCLN-201ENST00000246117 LMBRD1Q9NUN5 540 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms