RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 LMO7Q8WWI1 1683 aa17.55■□□□□ 0.4
HIF3A-202ENST00000244303 MCCP23508 829 aa17.54■□□□□ 0.4
HIF3A-202ENST00000244303 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
HIF3A-202ENST00000244303 TMX3Q96JJ7 454 aa17.54■□□□□ 0.4
HIF3A-202ENST00000244303 PLEKHO1Q53GL0 409 aaPredicted RBP17.54■□□□□ 0.4
HIF3A-202ENST00000244303 PPP1R42Q7Z4L9 355 aa17.54■□□□□ 0.4
HIF3A-202ENST00000244303 NAP1L5Q96NT1 182 aaPredicted RBP17.54■□□□□ 0.4
HIF3A-202ENST00000244303 TRPM3Q9HCF6 1732 aaPredicted RBP17.53■□□□□ 0.4
HIF3A-202ENST00000244303 AOX1Q06278 1338 aa17.53■□□□□ 0.4
HIF3A-202ENST00000244303 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
HIF3A-202ENST00000244303 NUTM1Q86Y26 1132 aa17.53■□□□□ 0.4
HIF3A-202ENST00000244303 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
HIF3A-202ENST00000244303 SURF6O75683 361 aaKnown RBP17.52■□□□□ 0.4
HIF3A-202ENST00000244303 NCLP19338 710 aaKnown RBP17.52■□□□□ 0.4
HIF3A-202ENST00000244303 AKAP4Q5JQC9 854 aa17.52■□□□□ 0.4
HIF3A-202ENST00000244303 CHPF2Q9P2E5 772 aa17.52■□□□□ 0.4
HIF3A-202ENST00000244303 KCNQ3O43525 872 aa17.52■□□□□ 0.4
HIF3A-202ENST00000244303 CLCN1P35523 988 aa17.52■□□□□ 0.4
HIF3A-202ENST00000244303 ANAPC15P60006 121 aa17.52■□□□□ 0.4
HIF3A-202ENST00000244303 POLA2Q14181 598 aa17.52■□□□□ 0.4
HIF3A-202ENST00000244303 CAVIN1Q6NZI2 390 aaKnown RBP17.52■□□□□ 0.4
HIF3A-202ENST00000244303 RAB11FIP3O75154 756 aa17.51■□□□□ 0.39
HIF3A-202ENST00000244303 NBPF7P0C2Y1 421 aaPredicted RBP17.51■□□□□ 0.39
HIF3A-202ENST00000244303 MCM2P49736 904 aa17.51■□□□□ 0.39
HIF3A-202ENST00000244303 AMOTQ4VCS5 1084 aa17.51■□□□□ 0.39
HIF3A-202ENST00000244303 AXIN2Q9Y2T1 843 aa17.51■□□□□ 0.39
HIF3A-202ENST00000244303 KIF1AQ12756 1690 aa17.51■□□□□ 0.39
HIF3A-202ENST00000244303 IL25Q9H293 177 aa17.51■□□□□ 0.39
HIF3A-202ENST00000244303 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
HIF3A-202ENST00000244303 PI4KAP2A4QPH2 592 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 PRPF40AO75400 957 aaKnown RBP17.5■□□□□ 0.39
HIF3A-202ENST00000244303 HOXB7P09629 217 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 PI4KAP1Q8N8J0 262 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 RHPN1Q8TCX5 695 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 MAP4K4O95819 1239 aaPredicted RBP17.5■□□□□ 0.39
HIF3A-202ENST00000244303 NASPP49321 788 aaPredicted RBP17.5■□□□□ 0.39
HIF3A-202ENST00000244303 BEND3Q5T5X7 828 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 NOL8Q76FK4 1167 aaKnown RBP17.5■□□□□ 0.39
HIF3A-202ENST00000244303 DNAAF4Q8WXU2 420 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 TRIM44Q96DX7 344 aaPredicted RBP17.5■□□□□ 0.39
HIF3A-202ENST00000244303 CHAMP1Q96JM3 812 aa17.5■□□□□ 0.39
HIF3A-202ENST00000244303 ANXA1P04083 346 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 ATF3P18847 181 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 ZNF445P59923 1031 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 TEFQ10587 303 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 ZSCAN23Q3MJ62 389 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 ERBB4Q15303 1308 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 TMEM94Q12767 1356 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 BTBD11A6QL63 1104 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 CUL4AQ13619 759 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 FOXD4L5Q5VV16 416 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-202ENST00000244303 PI4K2BQ8TCG2 481 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 GPT2Q8TD30 523 aa17.49■□□□□ 0.39
HIF3A-202ENST00000244303 FOXD4L4Q8WXT5 416 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-202ENST00000244303 MST1RQ04912 1400 aa17.48■□□□□ 0.39
HIF3A-202ENST00000244303 ESPNB1AK53 854 aa17.48■□□□□ 0.39
HIF3A-202ENST00000244303 RNMTO43148 476 aaKnown RBP17.47■□□□□ 0.39
HIF3A-202ENST00000244303 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
HIF3A-202ENST00000244303 KIF1BPQ96EK5 621 aa17.47■□□□□ 0.39
HIF3A-202ENST00000244303 IL17RAQ96F46 866 aa17.47■□□□□ 0.39
HIF3A-202ENST00000244303 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
HIF3A-202ENST00000244303 ADCY9O60503 1353 aa17.47■□□□□ 0.39
HIF3A-202ENST00000244303 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
HIF3A-202ENST00000244303 PXDNQ92626 1479 aa17.46■□□□□ 0.39
HIF3A-202ENST00000244303 CCDC173Q0VFZ6 552 aa17.46■□□□□ 0.39
HIF3A-202ENST00000244303 DDX17Q92841 729 aaKnown RBP17.46■□□□□ 0.39
HIF3A-202ENST00000244303 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
HIF3A-202ENST00000244303 CRYBG1Q9Y4K1 1723 aa17.46■□□□□ 0.38
HIF3A-202ENST00000244303 BRD1O95696 1058 aa17.45■□□□□ 0.38
HIF3A-202ENST00000244303 HSPA4P34932 840 aa17.45■□□□□ 0.38
HIF3A-202ENST00000244303 INTS4Q96HW7 963 aaKnown RBP17.45■□□□□ 0.38
HIF3A-202ENST00000244303 CHMP4AQ9BY43 222 aa17.45■□□□□ 0.38
HIF3A-202ENST00000244303 EPB41L2O43491 1005 aaKnown RBP17.45■□□□□ 0.38
HIF3A-202ENST00000244303 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
HIF3A-202ENST00000244303 PPP1R9BQ96SB3 815 aa17.44■□□□□ 0.38
HIF3A-202ENST00000244303 STRCP1A6NGW2 1772 aa17.44■□□□□ 0.38
HIF3A-202ENST00000244303 SGSM2O43147 1006 aa17.44■□□□□ 0.38
HIF3A-202ENST00000244303 CAMTA1Q9Y6Y1 1673 aa17.44■□□□□ 0.38
HIF3A-202ENST00000244303 ERBB3P21860 1342 aa17.43■□□□□ 0.38
HIF3A-202ENST00000244303 RAD50Q92878 1312 aa17.43■□□□□ 0.38
HIF3A-202ENST00000244303 CNTROBQ8N137 903 aa17.43■□□□□ 0.38
HIF3A-202ENST00000244303 ANP32BQ92688 251 aaKnown RBP17.43■□□□□ 0.38
HIF3A-202ENST00000244303 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
HIF3A-202ENST00000244303 NSFL1CQ9UNZ2 370 aaKnown RBP17.43■□□□□ 0.38
HIF3A-202ENST00000244303 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
HIF3A-202ENST00000244303 DCCP43146 1447 aa17.43■□□□□ 0.38
HIF3A-202ENST00000244303 RGPD5Q99666 1765 aa17.42■□□□□ 0.38
HIF3A-202ENST00000244303 TCHHQ07283 1943 aa17.42■□□□□ 0.38
HIF3A-202ENST00000244303 OVOS2A0A0G2JMS6 1433 aa17.42■□□□□ 0.38
HIF3A-202ENST00000244303 PRIM1P49642 420 aaKnown RBP17.42■□□□□ 0.38
HIF3A-202ENST00000244303 HSP90AB4PQ58FF6 505 aa17.42■□□□□ 0.38
HIF3A-202ENST00000244303 TMEM63CQ9P1W3 806 aa17.42■□□□□ 0.38
HIF3A-202ENST00000244303 OS9Q13438 667 aaPredicted RBP17.41■□□□□ 0.38
HIF3A-202ENST00000244303 RBSNQ9H1K0 784 aa17.41■□□□□ 0.38
HIF3A-202ENST00000244303 MAP3K2Q9Y2U5 619 aa17.41■□□□□ 0.38
HIF3A-202ENST00000244303 PROSER3Q2NL68 480 aa17.41■□□□□ 0.38
HIF3A-202ENST00000244303 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms