RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
SNRNP27-201ENST00000244227 PIP4K2BP78356 416 aa17.22■□□□□ 0.35
SNRNP27-201ENST00000244227 KSR2Q6VAB6 950 aa17.21■□□□□ 0.35
SNRNP27-201ENST00000244227 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
SNRNP27-201ENST00000244227 ANP32AP39687 249 aaKnown RBP17.21■□□□□ 0.35
SNRNP27-201ENST00000244227 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
SNRNP27-201ENST00000244227 ADAMTS2O95450 1211 aa17.2■□□□□ 0.34
SNRNP27-201ENST00000244227 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
SNRNP27-201ENST00000244227 NPM2Q86SE8 214 aaKnown RBP17.2■□□□□ 0.34
SNRNP27-201ENST00000244227 LRRFIP2Q9Y608 721 aaKnown RBP17.2■□□□□ 0.34
SNRNP27-201ENST00000244227 TOGARAM1Q9Y4F4 1720 aa17.2■□□□□ 0.34
SNRNP27-201ENST00000244227 SEC24BO95487 1268 aa17.19■□□□□ 0.34
SNRNP27-201ENST00000244227 HMMRO75330 724 aa17.19■□□□□ 0.34
SNRNP27-201ENST00000244227 PAPPAQ13219 1627 aa17.18■□□□□ 0.34
SNRNP27-201ENST00000244227 KCPQ6ZWJ8 1503 aa17.18■□□□□ 0.34
SNRNP27-201ENST00000244227 PNMA6EA0A0J9YXQ4 647 aa17.18■□□□□ 0.34
SNRNP27-201ENST00000244227 NBPF7P0C2Y1 421 aaPredicted RBP17.18■□□□□ 0.34
SNRNP27-201ENST00000244227 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
SNRNP27-201ENST00000244227 UBR2Q8IWV8 1755 aa17.18■□□□□ 0.34
SNRNP27-201ENST00000244227 TNS2Q63HR2 1409 aa17.18■□□□□ 0.34
SNRNP27-201ENST00000244227 PLCH1Q4KWH8 1693 aa17.18■□□□□ 0.34
SNRNP27-201ENST00000244227 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
SNRNP27-201ENST00000244227 IPO9Q96P70 1041 aaKnown RBP17.17■□□□□ 0.34
SNRNP27-201ENST00000244227 NRAPQ86VF7 1730 aa17.17■□□□□ 0.34
SNRNP27-201ENST00000244227 ALDH1L1O75891 902 aa17.17■□□□□ 0.34
SNRNP27-201ENST00000244227 MYL6BP14649 208 aa17.17■□□□□ 0.34
SNRNP27-201ENST00000244227 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
SNRNP27-201ENST00000244227 NUTM2BA6NNL0 878 aaPredicted RBP17.16■□□□□ 0.34
SNRNP27-201ENST00000244227 NUTM2EB1AL46 878 aaPredicted RBP17.16■□□□□ 0.34
SNRNP27-201ENST00000244227 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
SNRNP27-201ENST00000244227 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
SNRNP27-201ENST00000244227 NUTM2AQ8IVF1 878 aaPredicted RBP17.16■□□□□ 0.34
SNRNP27-201ENST00000244227 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
SNRNP27-201ENST00000244227 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
SNRNP27-201ENST00000244227 C16orf71Q8IYS4 520 aaPredicted RBP17.15■□□□□ 0.34
SNRNP27-201ENST00000244227 SPATA31A1Q5TZJ5 1347 aa17.15■□□□□ 0.34
SNRNP27-201ENST00000244227 PLEKHM2Q8IWE5 1019 aa17.14■□□□□ 0.34
SNRNP27-201ENST00000244227 LAMB4A4D0S4 1761 aa17.14■□□□□ 0.33
SNRNP27-201ENST00000244227 SLIT2O94813 1529 aa17.14■□□□□ 0.33
SNRNP27-201ENST00000244227 SMARCA5O60264 1052 aaPredicted RBP17.14■□□□□ 0.33
SNRNP27-201ENST00000244227 CWF19L2Q2TBE0 894 aaKnown RBP17.14■□□□□ 0.33
SNRNP27-201ENST00000244227 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
SNRNP27-201ENST00000244227 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
SNRNP27-201ENST00000244227 SSH3Q8TE77 659 aa17.14■□□□□ 0.33
SNRNP27-201ENST00000244227 PIGBQ92521 554 aa17.14■□□□□ 0.33
SNRNP27-201ENST00000244227 TMOD3Q9NYL9 352 aa17.14■□□□□ 0.33
SNRNP27-201ENST00000244227 WNK3Q9BYP7 1800 aa17.13■□□□□ 0.33
SNRNP27-201ENST00000244227 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
SNRNP27-201ENST00000244227 EXOC5O00471 708 aa17.13■□□□□ 0.33
SNRNP27-201ENST00000244227 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
SNRNP27-201ENST00000244227 POLA2Q14181 598 aa17.13■□□□□ 0.33
SNRNP27-201ENST00000244227 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
SNRNP27-201ENST00000244227 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
SNRNP27-201ENST00000244227 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
SNRNP27-201ENST00000244227 ERBB4Q15303 1308 aa17.13■□□□□ 0.33
SNRNP27-201ENST00000244227 EXOC6BQ9Y2D4 811 aa17.12■□□□□ 0.33
SNRNP27-201ENST00000244227 IBTKQ9P2D0 1353 aaPredicted RBP17.12■□□□□ 0.33
SNRNP27-201ENST00000244227 PTCD1O75127 700 aaKnown RBP17.12■□□□□ 0.33
SNRNP27-201ENST00000244227 ANKRD13DQ6ZTN6 518 aa17.12■□□□□ 0.33
SNRNP27-201ENST00000244227 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
SNRNP27-201ENST00000244227 RIC3Q7Z5B4 369 aa17.12■□□□□ 0.33
SNRNP27-201ENST00000244227 OTUD7AQ8TE49 926 aaPredicted RBP17.12■□□□□ 0.33
SNRNP27-201ENST00000244227 THRAP3Q9Y2W1 955 aaKnown RBP17.12■□□□□ 0.33
SNRNP27-201ENST00000244227 UTYO14607 1347 aa17.12■□□□□ 0.33
SNRNP27-201ENST00000244227 APBB1O00213 710 aa17.11■□□□□ 0.33
SNRNP27-201ENST00000244227 METTL22Q9BUU2 404 aaPredicted RBP17.11■□□□□ 0.33
SNRNP27-201ENST00000244227 CDCA7Q9BWT1 371 aaPredicted RBP17.11■□□□□ 0.33
SNRNP27-201ENST00000244227 ASAP1Q9ULH1 1129 aa17.11■□□□□ 0.33
SNRNP27-201ENST00000244227 LRP6O75581 1613 aa17.11■□□□□ 0.33
SNRNP27-201ENST00000244227 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
SNRNP27-201ENST00000244227 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
SNRNP27-201ENST00000244227 ATG3Q9NT62 314 aa17.1■□□□□ 0.33
SNRNP27-201ENST00000244227 A1BGP04217 495 aa17.1■□□□□ 0.33
SNRNP27-201ENST00000244227 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
SNRNP27-201ENST00000244227 NWD2Q9ULI1 1742 aa17.09■□□□□ 0.33
SNRNP27-201ENST00000244227 BCL9O00512 1426 aa17.09■□□□□ 0.33
SNRNP27-201ENST00000244227 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
SNRNP27-201ENST00000244227 GRM8O00222 908 aa17.09■□□□□ 0.33
SNRNP27-201ENST00000244227 GSPT1P15170 499 aaKnown RBP17.09■□□□□ 0.33
SNRNP27-201ENST00000244227 MTX1Q13505 466 aa17.09■□□□□ 0.33
SNRNP27-201ENST00000244227 KAZALD1Q96I82 304 aa17.09■□□□□ 0.33
SNRNP27-201ENST00000244227 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
SNRNP27-201ENST00000244227 ITGB4P16144 1822 aa17.08■□□□□ 0.33
SNRNP27-201ENST00000244227 MYD88Q99836 296 aa17.08■□□□□ 0.33
SNRNP27-201ENST00000244227 JCADQ9P266 1359 aa17.08■□□□□ 0.32
SNRNP27-201ENST00000244227 SRGAP3O43295 1099 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 TTC22Q5TAA0 569 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 VSIG10Q8N0Z9 540 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 PLBD2Q8NHP8 589 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 SALL3Q9BXA9 1300 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 NEXNQ0ZGT2 675 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 GCKRQ14397 625 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 BARGINQ6ZT62 677 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 SUCLG2Q96I99 432 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
SNRNP27-201ENST00000244227 DDB1Q16531 1140 aa17.06■□□□□ 0.32
SNRNP27-201ENST00000244227 TTLL7Q6ZT98 887 aa17.05■□□□□ 0.32
SNRNP27-201ENST00000244227 UNC5CLQ8IV45 518 aa17.05■□□□□ 0.32
SNRNP27-201ENST00000244227 BCL11AQ9H165 835 aa17.05■□□□□ 0.32
SNRNP27-201ENST00000244227 OSBPL3Q9H4L5 887 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms