RNA–Protein interactions for RNA: ENST00000243914.7

CTCFL-201, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-201ENST00000243914 COPS6Q7L5N1 327 aa13.64□□□□□ -0.23
CTCFL-201ENST00000243914 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
CTCFL-201ENST00000243914 XAGE3Q8WTP9 111 aa13.64□□□□□ -0.23
CTCFL-201ENST00000243914 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-201ENST00000243914 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
CTCFL-201ENST00000243914 SDSP20132 328 aa13.63□□□□□ -0.23
CTCFL-201ENST00000243914 OS9Q13438 667 aaPredicted RBP13.63□□□□□ -0.23
CTCFL-201ENST00000243914 HMMRO75330 724 aa13.63□□□□□ -0.23
CTCFL-201ENST00000243914 BEND3Q5T5X7 828 aa13.63□□□□□ -0.23
CTCFL-201ENST00000243914 ADCY9O60503 1353 aa13.63□□□□□ -0.23
CTCFL-201ENST00000243914 GNAI3P08754 354 aa13.63□□□□□ -0.23
CTCFL-201ENST00000243914 BMP2KLQ5H9B9 411 aa13.63□□□□□ -0.23
CTCFL-201ENST00000243914 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
CTCFL-201ENST00000243914 FRAT2O75474 233 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-201ENST00000243914 SOS1Q07889 1333 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-201ENST00000243914 TTC22Q5TAA0 569 aa13.62□□□□□ -0.23
CTCFL-201ENST00000243914 MYD88Q99836 296 aa13.62□□□□□ -0.23
CTCFL-201ENST00000243914 ATP8B2P98198 1209 aa13.61□□□□□ -0.23
CTCFL-201ENST00000243914 ZCRB1Q8TBF4 217 aaKnown RBP13.61□□□□□ -0.23
CTCFL-201ENST00000243914 CD2BP2O95400 341 aaKnown RBP13.61□□□□□ -0.23
CTCFL-201ENST00000243914 A1BGP04217 495 aa13.61□□□□□ -0.23
CTCFL-201ENST00000243914 PDIA6Q15084 440 aa13.61□□□□□ -0.23
CTCFL-201ENST00000243914 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
CTCFL-201ENST00000243914 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
CTCFL-201ENST00000243914 NFKBIBQ15653 356 aa13.6□□□□□ -0.23
CTCFL-201ENST00000243914 ALS2Q96Q42 1657 aa13.6□□□□□ -0.23
CTCFL-201ENST00000243914 XIRP1Q702N8 1843 aaKnown RBP13.6□□□□□ -0.23
CTCFL-201ENST00000243914 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-201ENST00000243914 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
CTCFL-201ENST00000243914 PDE1AP54750 535 aa13.59□□□□□ -0.23
CTCFL-201ENST00000243914 SOS2Q07890 1332 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-201ENST00000243914 NOL8Q76FK4 1167 aaKnown RBP13.59□□□□□ -0.23
CTCFL-201ENST00000243914 EP400Q96L91 3159 aa13.59□□□□□ -0.23
CTCFL-201ENST00000243914 LRRC37A3O60309 1634 aa13.59□□□□□ -0.23
CTCFL-201ENST00000243914 DCAF5Q96JK2 942 aa13.58□□□□□ -0.23
CTCFL-201ENST00000243914 CCDC85AQ96PX6 553 aaPredicted RBP13.58□□□□□ -0.23
CTCFL-201ENST00000243914 ZBTB3Q9H5J0 574 aa13.58□□□□□ -0.23
CTCFL-201ENST00000243914 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.23
CTCFL-201ENST00000243914 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.23
CTCFL-201ENST00000243914 CDC45O75419 566 aa13.58□□□□□ -0.24
CTCFL-201ENST00000243914 BECN1Q14457 450 aa13.58□□□□□ -0.24
CTCFL-201ENST00000243914 KSR2Q6VAB6 950 aa13.58□□□□□ -0.24
CTCFL-201ENST00000243914 KIF1AQ12756 1690 aa13.58□□□□□ -0.24
CTCFL-201ENST00000243914 SUCLG2Q96I99 432 aa13.58□□□□□ -0.24
CTCFL-201ENST00000243914 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
CTCFL-201ENST00000243914 USP54Q70EL1 1684 aa13.57□□□□□ -0.24
CTCFL-201ENST00000243914 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
CTCFL-201ENST00000243914 DTNBO60941 627 aa13.57□□□□□ -0.24
CTCFL-201ENST00000243914 IGKV5-2P06315 115 aa13.57□□□□□ -0.24
CTCFL-201ENST00000243914 IL2RBP14784 551 aa13.57□□□□□ -0.24
CTCFL-201ENST00000243914 BABAM1Q9NWV8 329 aa13.57□□□□□ -0.24
CTCFL-201ENST00000243914 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
CTCFL-201ENST00000243914 BICC1Q9H694 974 aaKnown RBP13.57□□□□□ -0.24
CTCFL-201ENST00000243914 DDX21Q9NR30 783 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTCFL-201ENST00000243914 MX1P20591 662 aa13.56□□□□□ -0.24
CTCFL-201ENST00000243914 DEKP35659 375 aaKnown RBP13.56□□□□□ -0.24
CTCFL-201ENST00000243914 EPHA10Q5JZY3 1008 aa13.56□□□□□ -0.24
CTCFL-201ENST00000243914 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
CTCFL-201ENST00000243914 DCCP43146 1447 aa13.56□□□□□ -0.24
CTCFL-201ENST00000243914 FMNL2Q96PY5 1086 aa13.56□□□□□ -0.24
CTCFL-201ENST00000243914 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
CTCFL-201ENST00000243914 UBE3BQ7Z3V4 1068 aa13.55□□□□□ -0.24
CTCFL-201ENST00000243914 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
CTCFL-201ENST00000243914 IL25Q9H293 177 aa13.55□□□□□ -0.24
CTCFL-201ENST00000243914 HYPKQ9NX55 129 aa13.55□□□□□ -0.24
CTCFL-201ENST00000243914 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
CTCFL-201ENST00000243914 RHPN1Q8TCX5 695 aa13.55□□□□□ -0.24
CTCFL-201ENST00000243914 CCDC8Q9H0W5 538 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-201ENST00000243914 PHRF1Q9P1Y6 1649 aaKnown RBP13.54□□□□□ -0.24
CTCFL-201ENST00000243914 KAZALD1Q96I82 304 aa13.54□□□□□ -0.24
CTCFL-201ENST00000243914 KIF2CQ99661 725 aa13.54□□□□□ -0.24
CTCFL-201ENST00000243914 NBPF26B4DH59 902 aa13.54□□□□□ -0.24
CTCFL-201ENST00000243914 EIF5BO60841 1220 aaKnown RBP13.54□□□□□ -0.24
CTCFL-201ENST00000243914 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
CTCFL-201ENST00000243914 NBPF14Q5TI25 921 aa13.54□□□□□ -0.24
CTCFL-201ENST00000243914 NBPF10Q6P3W6 841 aaKnown RBP13.54□□□□□ -0.24
CTCFL-201ENST00000243914 NBPF15Q8N660 670 aa13.54□□□□□ -0.24
CTCFL-201ENST00000243914 ACSBG1Q96GR2 724 aa13.54□□□□□ -0.24
CTCFL-201ENST00000243914 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
CTCFL-201ENST00000243914 GRM8O00222 908 aa13.53□□□□□ -0.24
CTCFL-201ENST00000243914 HSCBQ8IWL3 235 aa13.53□□□□□ -0.24
CTCFL-201ENST00000243914 SSH3Q8TE77 659 aa13.53□□□□□ -0.24
CTCFL-201ENST00000243914 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
CTCFL-201ENST00000243914 HOXB7P09629 217 aa13.53□□□□□ -0.24
CTCFL-201ENST00000243914 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.24
CTCFL-201ENST00000243914 IBTKQ9P2D0 1353 aaPredicted RBP13.52□□□□□ -0.24
CTCFL-201ENST00000243914 LMO7Q8WWI1 1683 aa13.52□□□□□ -0.24
CTCFL-201ENST00000243914 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.25
CTCFL-201ENST00000243914 ANO2Q9NQ90 1003 aa13.52□□□□□ -0.25
CTCFL-201ENST00000243914 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
CTCFL-201ENST00000243914 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
CTCFL-201ENST00000243914 LARP6Q9BRS8 491 aaKnown RBP13.52□□□□□ -0.25
CTCFL-201ENST00000243914 COL18A1P39060 1754 aa13.52□□□□□ -0.25
CTCFL-201ENST00000243914 PCDH11XQ9BZA7 1347 aa13.51□□□□□ -0.25
CTCFL-201ENST00000243914 PCDH11YQ9BZA8 1340 aa13.51□□□□□ -0.25
CTCFL-201ENST00000243914 NCAPD2Q15021 1401 aa13.51□□□□□ -0.25
CTCFL-201ENST00000243914 A0A087WZG4 1122 aa13.51□□□□□ -0.25
CTCFL-201ENST00000243914 NEURL1BA8MQ27 555 aa13.51□□□□□ -0.25
CTCFL-201ENST00000243914 LINS1Q8NG48 757 aa13.51□□□□□ -0.25
CTCFL-201ENST00000243914 KDM3BQ7LBC6 1761 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms