RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 NPHP3Q7Z494 1330 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 SHTN1A0MZ66 631 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 LUZP1Q86V48 1076 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 GPT2Q8TD30 523 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 MAGI1Q96QZ7 1491 aaPredicted RBP11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 CCDC69A6NI79 296 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 MBIPQ9NS73 344 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 SPG7Q9UQ90 795 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 LRRFIP2Q9Y608 721 aaKnown RBP11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 ZBTB7BO15156 539 aaPredicted RBP11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 KIF5CO60282 957 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 MAP9Q49MG5 647 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 FSIP1Q8NA03 581 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 CCDC47Q96A33 483 aaKnown RBP11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 BRD1O95696 1058 aa11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 FAM193AP78312 1265 aa11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 C1orf141Q5JVX7 400 aa11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 ADGRF5Q8IZF2 1346 aa11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 EPB41L2O43491 1005 aaKnown RBP11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 GNG11P61952 73 aa11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 AACSQ86V21 672 aa11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 GCC2Q8IWJ2 1684 aa11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 EIF2AK4Q9P2K8 1649 aaKnown RBP11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 F6X3S4 739 aa11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 PIP4K2AP48426 406 aaPredicted RBP11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 ZFP91Q96JP5 570 aaPredicted RBP11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 CDK19Q9BWU1 502 aa11.13□□□□□ -0.63
NUDCD1-201ENST00000239690 SYT1P21579 422 aa11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 NEUROD6Q96NK8 337 aa11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 CARD14Q9BXL6 1004 aa11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 RPGRIP1LQ68CZ1 1315 aa11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 NAP1L1P55209 391 aaKnown RBP11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 PKP1Q13835 747 aa11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 DNAAF4Q8WXU2 420 aa11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 SMARCC1Q92922 1105 aaPredicted RBP11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 MEIS3Q99687 375 aa11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 GADD45BO75293 160 aaPredicted RBP11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 ZNF330Q9Y3S2 320 aaPredicted RBP11.12□□□□□ -0.63
NUDCD1-201ENST00000239690 CAPN2P17655 700 aa11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 MNAT1P51948 309 aa11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 CCAR1Q8IX12 1150 aaKnown RBP11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 ELF2Q15723 593 aa11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 WASHC4Q2M389 1173 aa11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 IPO4Q8TEX9 1081 aaKnown RBP11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 VAMP4O75379 141 aa11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 SLC3A2P08195 630 aaKnown RBP11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 MCM3P25205 808 aa11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 IQCEQ6IPM2 695 aa11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 CENPHQ9H3R5 247 aa11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 TTC31Q49AM3 519 aaPredicted RBP11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 ZSCAN16Q9H4T2 348 aaPredicted RBP11.11□□□□□ -0.63
NUDCD1-201ENST00000239690 KDM5CP41229 1560 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 MCM6Q14566 821 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 SYT10Q6XYQ8 523 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 NECAB1Q8N987 351 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 RSPH14Q9UHP6 348 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 PLB1Q6P1J6 1458 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 ATP2B1P20020 1258 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 KRBA2Q6ZNG9 492 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 CCDC148Q8NFR7 591 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 PDLIM2Q96JY6 352 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 ZNHIT6Q9NWK9 470 aaKnown RBP11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 MCM10Q7L590 875 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 ANKRD36BQ8N2N9 1353 aa11.1□□□□□ -0.63
NUDCD1-201ENST00000239690 GOLGA6L10A6NI86 522 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 AK2P54819 239 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 CEP85Q6P2H3 762 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 CCDC12Q8WUD4 166 aaPredicted RBP11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 ZSWIM4Q9H7M6 989 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 DNMT1P26358 1616 aaKnown RBP11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 BIN1O00499 593 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 ZNF75DP51815 510 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 AIMP1Q12904 312 aaKnown RBP11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 RRS1Q15050 365 aaKnown RBP11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 AOPEPQ8N6M6 819 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 SIL1Q9H173 461 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 FAM135AQ9P2D6 1515 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 CTTNBP2Q8WZ74 1663 aa11.09□□□□□ -0.63
NUDCD1-201ENST00000239690 NCBP3Q53F19 620 aaKnown RBP11.08□□□□□ -0.64
NUDCD1-201ENST00000239690 TMX1Q9H3N1 280 aa11.08□□□□□ -0.64
NUDCD1-201ENST00000239690 CHMLP26374 656 aa11.08□□□□□ -0.64
NUDCD1-201ENST00000239690 A0A1B0GUL7 405 aa11.08□□□□□ -0.64
NUDCD1-201ENST00000239690 ERICH2A1L162 156 aa11.08□□□□□ -0.64
NUDCD1-201ENST00000239690 CCDC181Q5TID7 509 aa11.08□□□□□ -0.64
NUDCD1-201ENST00000239690 MIS18AQ9NYP9 233 aa11.08□□□□□ -0.64
NUDCD1-201ENST00000239690 OTUD7AQ8TE49 926 aaPredicted RBP11.07□□□□□ -0.64
NUDCD1-201ENST00000239690 ECHDC1Q9NTX5 307 aa11.07□□□□□ -0.64
NUDCD1-201ENST00000239690 XBP1P17861 261 aa11.07□□□□□ -0.64
NUDCD1-201ENST00000239690 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
NUDCD1-201ENST00000239690 C8orf58Q8NAV2 365 aa11.07□□□□□ -0.64
NUDCD1-201ENST00000239690 KIAA1524Q8TCG1 905 aa11.07□□□□□ -0.64
NUDCD1-201ENST00000239690 GOLGA1Q92805 767 aa11.07□□□□□ -0.64
NUDCD1-201ENST00000239690 CBX8Q9HC52 389 aa11.07□□□□□ -0.64
NUDCD1-201ENST00000239690 GUCY1B3Q02153 619 aa11.07□□□□□ -0.64
NUDCD1-201ENST00000239690 UBASH3AP57075 661 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 509.1 ms