RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 NAP1L5Q96NT1 182 aaPredicted RBP19■□□□□ 0.63
CTSD-201ENST00000236671 FLIIQ13045 1269 aa18.99■□□□□ 0.63
CTSD-201ENST00000236671 TSHZ3Q63HK5 1081 aa18.99■□□□□ 0.63
CTSD-201ENST00000236671 STK31Q9BXU1 1019 aa18.99■□□□□ 0.63
CTSD-201ENST00000236671 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
CTSD-201ENST00000236671 ZSCAN23Q3MJ62 389 aa18.98■□□□□ 0.63
CTSD-201ENST00000236671 N4BP2Q86UW6 1770 aaPredicted RBP18.98■□□□□ 0.63
CTSD-201ENST00000236671 HTATSF1O43719 755 aaKnown RBP18.98■□□□□ 0.63
CTSD-201ENST00000236671 CAVIN1Q6NZI2 390 aaKnown RBP18.98■□□□□ 0.63
CTSD-201ENST00000236671 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
CTSD-201ENST00000236671 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
CTSD-201ENST00000236671 LTN1O94822 1766 aa18.97■□□□□ 0.63
CTSD-201ENST00000236671 GCP02774 474 aa18.97■□□□□ 0.63
CTSD-201ENST00000236671 RGPD5Q99666 1765 aa18.97■□□□□ 0.63
CTSD-201ENST00000236671 PNMA6EA0A0J9YXQ4 647 aa18.97■□□□□ 0.63
CTSD-201ENST00000236671 GNAI3P08754 354 aa18.97■□□□□ 0.63
CTSD-201ENST00000236671 MX1P20591 662 aa18.97■□□□□ 0.63
CTSD-201ENST00000236671 AMPHP49418 695 aa18.97■□□□□ 0.63
CTSD-201ENST00000236671 ATP8B2P98198 1209 aa18.95■□□□□ 0.62
CTSD-201ENST00000236671 FKBP5Q13451 457 aaPredicted RBP18.95■□□□□ 0.62
CTSD-201ENST00000236671 CCDC30Q5VVM6 783 aa18.95■□□□□ 0.62
CTSD-201ENST00000236671 GPT2Q8TD30 523 aa18.95■□□□□ 0.62
CTSD-201ENST00000236671 NEK4P51957 841 aa18.95■□□□□ 0.62
CTSD-201ENST00000236671 TMX3Q96JJ7 454 aa18.95■□□□□ 0.62
CTSD-201ENST00000236671 NFAT5O94916 1531 aa18.95■□□□□ 0.62
CTSD-201ENST00000236671 PXDNLA1KZ92 1463 aa18.95■□□□□ 0.62
CTSD-201ENST00000236671 USP54Q70EL1 1684 aa18.94■□□□□ 0.62
CTSD-201ENST00000236671 PRPF40AO75400 957 aaKnown RBP18.94■□□□□ 0.62
CTSD-201ENST00000236671 NCLP19338 710 aaKnown RBP18.94■□□□□ 0.62
CTSD-201ENST00000236671 SLIT3O75094 1523 aa18.94■□□□□ 0.62
CTSD-201ENST00000236671 GNAT3A8MTJ3 354 aa18.94■□□□□ 0.62
CTSD-201ENST00000236671 C8orf37Q96NL8 207 aa18.94■□□□□ 0.62
CTSD-201ENST00000236671 STAP2Q9UGK3 403 aa18.94■□□□□ 0.62
CTSD-201ENST00000236671 PALD1Q9ULE6 856 aa18.94■□□□□ 0.62
CTSD-201ENST00000236671 CHMLP26374 656 aa18.93■□□□□ 0.62
CTSD-201ENST00000236671 MCM2P49736 904 aa18.93■□□□□ 0.62
CTSD-201ENST00000236671 SOS1Q07889 1333 aaPredicted RBP18.93■□□□□ 0.62
CTSD-201ENST00000236671 ANP32BQ92688 251 aaKnown RBP18.92■□□□□ 0.62
CTSD-201ENST00000236671 LRRFIP2Q9Y608 721 aaKnown RBP18.92■□□□□ 0.62
CTSD-201ENST00000236671 ANAPC15P60006 121 aa18.92■□□□□ 0.62
CTSD-201ENST00000236671 CUL4AQ13619 759 aa18.92■□□□□ 0.62
CTSD-201ENST00000236671 NECTIN2Q92692 538 aa18.92■□□□□ 0.62
CTSD-201ENST00000236671 IL17RAQ96F46 866 aa18.92■□□□□ 0.62
CTSD-201ENST00000236671 CHAMP1Q96JM3 812 aa18.92■□□□□ 0.62
CTSD-201ENST00000236671 MAP3K5Q99683 1374 aa18.92■□□□□ 0.62
CTSD-201ENST00000236671 MCCP23508 829 aa18.91■□□□□ 0.62
CTSD-201ENST00000236671 RBM27Q9P2N5 1060 aaKnown RBP18.91■□□□□ 0.62
CTSD-201ENST00000236671 AXIN2Q9Y2T1 843 aa18.91■□□□□ 0.62
CTSD-201ENST00000236671 CACNA1FO60840 1977 aa18.91■□□□□ 0.62
CTSD-201ENST00000236671 RBSNQ9H1K0 784 aa18.91■□□□□ 0.62
CTSD-201ENST00000236671 HOXC9P31274 260 aa18.9■□□□□ 0.62
CTSD-201ENST00000236671 IL17REQ8NFR9 667 aa18.9■□□□□ 0.62
CTSD-201ENST00000236671 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
CTSD-201ENST00000236671 AOX1Q06278 1338 aa18.9■□□□□ 0.62
CTSD-201ENST00000236671 TRIM6-TRIM34B2RNG4 842 aa18.89■□□□□ 0.62
CTSD-201ENST00000236671 BRD1O95696 1058 aa18.89■□□□□ 0.62
CTSD-201ENST00000236671 PRIM1P49642 420 aaKnown RBP18.89■□□□□ 0.62
CTSD-201ENST00000236671 ZSCAN30Q86W11 494 aa18.89■□□□□ 0.62
CTSD-201ENST00000236671 UNC5CLQ8IV45 518 aa18.89■□□□□ 0.62
CTSD-201ENST00000236671 RILPL2Q969X0 211 aa18.89■□□□□ 0.62
CTSD-201ENST00000236671 USP44Q9H0E7 712 aa18.89■□□□□ 0.62
CTSD-201ENST00000236671 ANO2Q9NQ90 1003 aa18.89■□□□□ 0.62
CTSD-201ENST00000236671 BABAM1Q9NWV8 329 aa18.89■□□□□ 0.62
CTSD-201ENST00000236671 SPATA31A6Q5VVP1 1343 aa18.89■□□□□ 0.61
CTSD-201ENST00000236671 MEX3CQ5U5Q3 659 aaKnown RBP18.89■□□□□ 0.61
CTSD-201ENST00000236671 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
CTSD-201ENST00000236671 TMEM63CQ9P1W3 806 aa18.88■□□□□ 0.61
CTSD-201ENST00000236671 PLCH1Q4KWH8 1693 aa18.88■□□□□ 0.61
CTSD-201ENST00000236671 TAF7Q15545 349 aaPredicted RBP18.88■□□□□ 0.61
CTSD-201ENST00000236671 INTS4Q96HW7 963 aaKnown RBP18.88■□□□□ 0.61
CTSD-201ENST00000236671 NSFL1CQ9UNZ2 370 aaKnown RBP18.88■□□□□ 0.61
CTSD-201ENST00000236671 SSH3Q8TE77 659 aa18.87■□□□□ 0.61
CTSD-201ENST00000236671 PDLIM2Q96JY6 352 aa18.87■□□□□ 0.61
CTSD-201ENST00000236671 COL18A1P39060 1754 aa18.86■□□□□ 0.61
CTSD-201ENST00000236671 UBTFL1P0CB47 393 aaPredicted RBP18.86■□□□□ 0.61
CTSD-201ENST00000236671 FOXD4L5Q5VV16 416 aaPredicted RBP18.86■□□□□ 0.61
CTSD-201ENST00000236671 ARHGEF25Q86VW2 580 aa18.86■□□□□ 0.61
CTSD-201ENST00000236671 FOXD4L4Q8WXT5 416 aaPredicted RBP18.86■□□□□ 0.61
CTSD-201ENST00000236671 LRSAM1Q6UWE0 723 aa18.86■□□□□ 0.61
CTSD-201ENST00000236671 NGLY1Q96IV0 654 aa18.86■□□□□ 0.61
CTSD-201ENST00000236671 CAMTA1Q9Y6Y1 1673 aa18.85■□□□□ 0.61
CTSD-201ENST00000236671 IL25Q9H293 177 aa18.85■□□□□ 0.61
CTSD-201ENST00000236671 BTG4Q9NY30 223 aa18.85■□□□□ 0.61
CTSD-201ENST00000236671 RGPD2P0DJD1 1756 aa18.85■□□□□ 0.61
CTSD-201ENST00000236671 EPB41L2O43491 1005 aaKnown RBP18.85■□□□□ 0.61
CTSD-201ENST00000236671 MBD3O95983 291 aa18.85■□□□□ 0.61
CTSD-201ENST00000236671 HS1BP3Q53T59 392 aa18.85■□□□□ 0.61
CTSD-201ENST00000236671 LTV1Q96GA3 475 aaPredicted RBP18.85■□□□□ 0.61
CTSD-201ENST00000236671 IL1RAPL2Q9NP60 686 aa18.85■□□□□ 0.61
CTSD-201ENST00000236671 HDGFL1Q5TGJ6 251 aa18.84■□□□□ 0.61
CTSD-201ENST00000236671 KCNH5Q8NCM2 988 aa18.84■□□□□ 0.61
CTSD-201ENST00000236671 UBE2Q2Q8WVN8 375 aa18.84■□□□□ 0.61
CTSD-201ENST00000236671 SYCE3A1L190 88 aa18.83■□□□□ 0.61
CTSD-201ENST00000236671 POLA2Q14181 598 aa18.83■□□□□ 0.61
CTSD-201ENST00000236671 NOL8Q76FK4 1167 aaKnown RBP18.83■□□□□ 0.61
CTSD-201ENST00000236671 PHAXQ9H814 394 aaKnown RBP18.83■□□□□ 0.61
CTSD-201ENST00000236671 STRN4Q9NRL3 753 aa18.83■□□□□ 0.61
CTSD-201ENST00000236671 LMO7Q8WWI1 1683 aa18.83■□□□□ 0.6
CTSD-201ENST00000236671 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.6
CTSD-201ENST00000236671 RAB11FIP3O75154 756 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms