RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 ATP10DQ9P241 1426 aa29.86■■■□□ 2.37
RRP9-201ENST00000232888 C5P01031 1676 aa29.86■■■□□ 2.37
RRP9-201ENST00000232888 VPS72Q15906 364 aa29.86■■■□□ 2.37
RRP9-201ENST00000232888 KSR2Q6VAB6 950 aa29.86■■■□□ 2.37
RRP9-201ENST00000232888 MEIS3Q99687 375 aa29.86■■■□□ 2.37
RRP9-201ENST00000232888 PDZRN3Q9UPQ7 1066 aa29.86■■■□□ 2.37
RRP9-201ENST00000232888 TOGARAM1Q9Y4F4 1720 aa29.85■■■□□ 2.37
RRP9-201ENST00000232888 PI4KAP2A4QPH2 592 aa29.85■■■□□ 2.37
RRP9-201ENST00000232888 DDB1Q16531 1140 aa29.85■■■□□ 2.37
RRP9-201ENST00000232888 ANKRD44Q8N8A2 993 aa29.85■■■□□ 2.37
RRP9-201ENST00000232888 PI4KAP1Q8N8J0 262 aa29.85■■■□□ 2.37
RRP9-201ENST00000232888 SRCIN1Q9C0H9 1055 aa29.85■■■□□ 2.37
RRP9-201ENST00000232888 C1orf115Q9H7X2 142 aa29.85■■■□□ 2.37
RRP9-201ENST00000232888 KCPQ6ZWJ8 1503 aa29.84■■■□□ 2.37
RRP9-201ENST00000232888 PROSER3Q2NL68 480 aa29.83■■■□□ 2.37
RRP9-201ENST00000232888 C8orf37Q96NL8 207 aa29.83■■■□□ 2.37
RRP9-201ENST00000232888 USP16Q9Y5T5 823 aa29.83■■■□□ 2.37
RRP9-201ENST00000232888 BCL9LQ86UU0 1499 aa29.83■■■□□ 2.37
RRP9-201ENST00000232888 GLI3P10071 1580 aa29.83■■■□□ 2.37
RRP9-201ENST00000232888 LAMB4A4D0S4 1761 aa29.82■■■□□ 2.36
RRP9-201ENST00000232888 ADCY9O60503 1353 aa29.82■■■□□ 2.36
RRP9-201ENST00000232888 GNAI2P04899 355 aa29.82■■■□□ 2.36
RRP9-201ENST00000232888 SIRT2Q8IXJ6 389 aa29.82■■■□□ 2.36
RRP9-201ENST00000232888 CCDC9Q9Y3X0 531 aaKnown RBP29.82■■■□□ 2.36
RRP9-201ENST00000232888 ANXA1P04083 346 aa29.81■■■□□ 2.36
RRP9-201ENST00000232888 VSIG10Q8N0Z9 540 aa29.81■■■□□ 2.36
RRP9-201ENST00000232888 IBTKQ9P2D0 1353 aaPredicted RBP29.81■■■□□ 2.36
RRP9-201ENST00000232888 BEND3Q5T5X7 828 aa29.81■■■□□ 2.36
RRP9-201ENST00000232888 PIGBQ92521 554 aa29.81■■■□□ 2.36
RRP9-201ENST00000232888 TEX13AQ9BXU3 409 aaPredicted RBP29.81■■■□□ 2.36
RRP9-201ENST00000232888 ALDH1L1O75891 902 aa29.8■■■□□ 2.36
RRP9-201ENST00000232888 CEP85Q6P2H3 762 aa29.8■■■□□ 2.36
RRP9-201ENST00000232888 BCL9O00512 1426 aa29.79■■■□□ 2.36
RRP9-201ENST00000232888 RGS3P49796 1198 aa29.79■■■□□ 2.36
RRP9-201ENST00000232888 HMMRO75330 724 aa29.78■■■□□ 2.36
RRP9-201ENST00000232888 NUCB1Q02818 461 aa29.78■■■□□ 2.36
RRP9-201ENST00000232888 SKAP1Q86WV1 359 aa29.78■■■□□ 2.36
RRP9-201ENST00000232888 HSPA1LP34931 641 aa29.77■■■□□ 2.36
RRP9-201ENST00000232888 USP44Q9H0E7 712 aa29.77■■■□□ 2.36
RRP9-201ENST00000232888 HDAC5Q9UQL6 1122 aa29.77■■■□□ 2.36
RRP9-201ENST00000232888 MAP3K2Q9Y2U5 619 aa29.77■■■□□ 2.36
RRP9-201ENST00000232888 RBM19Q9Y4C8 960 aaKnown RBP29.77■■■□□ 2.36
RRP9-201ENST00000232888 LRP10Q7Z4F1 713 aa29.77■■■□□ 2.36
RRP9-201ENST00000232888 DCTPP1Q9H773 170 aa29.76■■■□□ 2.35
RRP9-201ENST00000232888 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.76■■■□□ 2.35
RRP9-201ENST00000232888 ATG3Q9NT62 314 aa29.75■■■□□ 2.35
RRP9-201ENST00000232888 ITGB4P16144 1822 aa29.74■■■□□ 2.35
RRP9-201ENST00000232888 UBTFL1P0CB47 393 aaPredicted RBP29.74■■■□□ 2.35
RRP9-201ENST00000232888 LINS1Q8NG48 757 aa29.74■■■□□ 2.35
RRP9-201ENST00000232888 PTCD1O75127 700 aaKnown RBP29.73■■■□□ 2.35
RRP9-201ENST00000232888 MYL6BP14649 208 aa29.73■■■□□ 2.35
RRP9-201ENST00000232888 PDE4AP27815 886 aa29.73■■■□□ 2.35
RRP9-201ENST00000232888 XAGE3Q8WTP9 111 aa29.73■■■□□ 2.35
RRP9-201ENST00000232888 USP21Q9UK80 565 aa29.73■■■□□ 2.35
RRP9-201ENST00000232888 COPS6Q7L5N1 327 aa29.73■■■□□ 2.35
RRP9-201ENST00000232888 RIC3Q7Z5B4 369 aa29.72■■■□□ 2.35
RRP9-201ENST00000232888 CHD1LQ86WJ1 897 aa29.72■■■□□ 2.35
RRP9-201ENST00000232888 BACH2Q9BYV9 841 aa29.72■■■□□ 2.35
RRP9-201ENST00000232888 ASAP1Q9ULH1 1129 aa29.72■■■□□ 2.35
RRP9-201ENST00000232888 AIMP1Q12904 312 aaKnown RBP29.71■■■□□ 2.35
RRP9-201ENST00000232888 MARCH10Q8NA82 808 aaPredicted RBP29.71■■■□□ 2.35
RRP9-201ENST00000232888 NEXNQ0ZGT2 675 aa29.7■■■□□ 2.35
RRP9-201ENST00000232888 MEX3CQ5U5Q3 659 aaKnown RBP29.7■■■□□ 2.35
RRP9-201ENST00000232888 ANKRD13DQ6ZTN6 518 aa29.7■■■□□ 2.35
RRP9-201ENST00000232888 ATP8B2P98198 1209 aa29.69■■■□□ 2.34
RRP9-201ENST00000232888 FAM161AQ3B820 660 aa29.69■■■□□ 2.34
RRP9-201ENST00000232888 PRIM1P49642 420 aaKnown RBP29.69■■■□□ 2.34
RRP9-201ENST00000232888 METTL22Q9BUU2 404 aaPredicted RBP29.69■■■□□ 2.34
RRP9-201ENST00000232888 STARD3NLO95772 234 aa29.67■■■□□ 2.34
RRP9-201ENST00000232888 FAM98CQ17RN3 349 aaKnown RBP29.67■■■□□ 2.34
RRP9-201ENST00000232888 PLBD2Q8NHP8 589 aa29.67■■■□□ 2.34
RRP9-201ENST00000232888 NBPF26B4DH59 902 aa29.66■■■□□ 2.34
RRP9-201ENST00000232888 NBPF14Q5TI25 921 aa29.66■■■□□ 2.34
RRP9-201ENST00000232888 ANKRD45Q5TZF3 282 aa29.66■■■□□ 2.34
RRP9-201ENST00000232888 NBPF10Q6P3W6 841 aaKnown RBP29.66■■■□□ 2.34
RRP9-201ENST00000232888 NBPF15Q8N660 670 aa29.66■■■□□ 2.34
RRP9-201ENST00000232888 LRRFIP2Q9Y608 721 aaKnown RBP29.66■■■□□ 2.34
RRP9-201ENST00000232888 UTYO14607 1347 aa29.66■■■□□ 2.34
RRP9-201ENST00000232888 DOT1LQ8TEK3 1739 aa29.65■■■□□ 2.34
RRP9-201ENST00000232888 SYTL4Q96C24 671 aaPredicted RBP29.64■■■□□ 2.34
RRP9-201ENST00000232888 C9orf78Q9NZ63 289 aaPredicted RBP29.64■■■□□ 2.33
RRP9-201ENST00000232888 ZBTB47Q9UFB7 747 aaPredicted RBP29.64■■■□□ 2.33
RRP9-201ENST00000232888 RBM42Q9BTD8 480 aaKnown RBP29.63■■■□□ 2.33
RRP9-201ENST00000232888 A1BGP04217 495 aa29.62■■■□□ 2.33
RRP9-201ENST00000232888 LNPKQ9C0E8 428 aa29.62■■■□□ 2.33
RRP9-201ENST00000232888 NBPF7P0C2Y1 421 aaPredicted RBP29.61■■■□□ 2.33
RRP9-201ENST00000232888 GRM8O00222 908 aa29.6■■■□□ 2.33
RRP9-201ENST00000232888 DNAJC10Q8IXB1 793 aa29.6■■■□□ 2.33
RRP9-201ENST00000232888 NEURL1BA8MQ27 555 aa29.6■■■□□ 2.33
RRP9-201ENST00000232888 IGKV5-2P06315 115 aa29.6■■■□□ 2.33
RRP9-201ENST00000232888 SSH3Q8TE77 659 aa29.6■■■□□ 2.33
RRP9-201ENST00000232888 MTX1Q13505 466 aa29.59■■■□□ 2.33
RRP9-201ENST00000232888 CWF19L2Q2TBE0 894 aaKnown RBP29.59■■■□□ 2.33
RRP9-201ENST00000232888 SMARCC1Q92922 1105 aaPredicted RBP29.59■■■□□ 2.33
RRP9-201ENST00000232888 AFF2P51816 1311 aa29.59■■■□□ 2.33
RRP9-201ENST00000232888 PIP4K2AP48426 406 aaPredicted RBP29.58■■■□□ 2.33
RRP9-201ENST00000232888 C8orf34Q49A92 452 aa29.58■■■□□ 2.33
RRP9-201ENST00000232888 GJD4Q96KN9 370 aaPredicted RBP29.58■■■□□ 2.33
RRP9-201ENST00000232888 MYD88Q99836 296 aa29.58■■■□□ 2.33
RRP9-201ENST00000232888 THSD7AQ9UPZ6 1657 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms