RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 USP8P40818 1118 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC91Q7Z6B0 441 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 CTCFLQ8NI51 663 aaPredicted RBP13.42□□□□□ -0.26
LAMA4-201ENST00000230538 UBA5Q9GZZ9 404 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 TOPBP1Q92547 1522 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 C11orf95C9JLR9 678 aaPredicted RBP13.42□□□□□ -0.26
LAMA4-201ENST00000230538 GUCY1B3Q02153 619 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 MAP3K12Q12852 859 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 PPP4R3AQ6IN85 833 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 ZSCAN30Q86W11 494 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
LAMA4-201ENST00000230538 SLC12A7Q9Y666 1083 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 TOP1P11387 765 aaKnown RBP13.42□□□□□ -0.26
LAMA4-201ENST00000230538 NAIPQ13075 1403 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 ARHGEF11O15085 1522 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 SSRP1Q08945 709 aaKnown RBP13.42□□□□□ -0.26
LAMA4-201ENST00000230538 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
LAMA4-201ENST00000230538 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 DYDC1Q8WWB3 177 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 INCENPQ9NQS7 918 aa13.42□□□□□ -0.26
LAMA4-201ENST00000230538 ZNF213O14771 459 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 RANBP6O60518 1105 aaKnown RBP13.41□□□□□ -0.26
LAMA4-201ENST00000230538 FGFR1OPO95684 399 aaKnown RBP13.41□□□□□ -0.26
LAMA4-201ENST00000230538 SLC5A1P13866 664 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 IFIT5Q13325 482 aaKnown RBP13.41□□□□□ -0.26
LAMA4-201ENST00000230538 SCLT1Q96NL6 688 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 TMX1Q9H3N1 280 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 F6X3S4 739 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 VPS36Q86VN1 386 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 ZNF444Q8N0Y2 327 aaPredicted RBP13.41□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC113Q9H0I3 377 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC8Q9H0W5 538 aaPredicted RBP13.41□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC96Q2M329 555 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 MAP2K1Q02750 393 aaPredicted RBP13.41□□□□□ -0.26
LAMA4-201ENST00000230538 MAP9Q49MG5 647 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 CLIP2Q9UDT6 1046 aa13.41□□□□□ -0.26
LAMA4-201ENST00000230538 RAB34Q9BZG1 259 aa13.4□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
LAMA4-201ENST00000230538 ANAPC15P60006 121 aa13.4□□□□□ -0.26
LAMA4-201ENST00000230538 IQCA1Q86XH1 822 aa13.4□□□□□ -0.26
LAMA4-201ENST00000230538 ABCC11Q96J66 1382 aa13.4□□□□□ -0.26
LAMA4-201ENST00000230538 HMGB2P26583 209 aaKnown RBP13.4□□□□□ -0.26
LAMA4-201ENST00000230538 AMOTQ4VCS5 1084 aa13.4□□□□□ -0.26
LAMA4-201ENST00000230538 CUL5Q93034 780 aa13.4□□□□□ -0.26
LAMA4-201ENST00000230538 TNPO1Q92973 898 aaKnown RBP13.4□□□□□ -0.26
LAMA4-201ENST00000230538 KIF4BQ2VIQ3 1234 aa13.4□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC82Q8N4S0 544 aa13.4□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC97Q96F63 343 aaPredicted RBP13.4□□□□□ -0.26
LAMA4-201ENST00000230538 SHTN1A0MZ66 631 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 KIF18AQ8NI77 898 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 NUP88Q99567 741 aaPredicted RBP13.39□□□□□ -0.27
LAMA4-201ENST00000230538 CTAGE5O15320 804 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 GOLGA8AA7E2F4 631 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 GOLGA8BA8MQT2 603 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 URI1O94763 535 aaPredicted RBP13.39□□□□□ -0.27
LAMA4-201ENST00000230538 MCM3P25205 808 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 KIF14Q15058 1648 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 NLRP5P59047 1200 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 LUZP1Q86V48 1076 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 CNNM3Q8NE01 707 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 GOPCQ9HD26 462 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
LAMA4-201ENST00000230538 PRDM10Q9NQV6 1147 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 LIMCH1Q9UPQ0 1083 aa13.39□□□□□ -0.27
LAMA4-201ENST00000230538 CHMP4BP1P59074 171 aa13.38□□□□□ -0.27
LAMA4-201ENST00000230538 NME9Q86XW9 330 aa13.38□□□□□ -0.27
LAMA4-201ENST00000230538 IFIT3O14879 490 aaKnown RBP13.38□□□□□ -0.27
LAMA4-201ENST00000230538 RRP9O43818 475 aaKnown RBP13.38□□□□□ -0.27
LAMA4-201ENST00000230538 CBX1P83916 185 aa13.38□□□□□ -0.27
LAMA4-201ENST00000230538 DNAAF4Q8WXU2 420 aa13.38□□□□□ -0.27
LAMA4-201ENST00000230538 TRMT112Q9UI30 125 aaKnown RBP13.38□□□□□ -0.27
LAMA4-201ENST00000230538 ANKRD18BA2A2Z9 1011 aa13.38□□□□□ -0.27
LAMA4-201ENST00000230538 CCDC150Q8NCX0 1101 aa13.38□□□□□ -0.27
LAMA4-201ENST00000230538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.38□□□□□ -0.27
LAMA4-201ENST00000230538 CCDC194A0A1B0GVG4 234 aa13.38□□□□□ -0.27
LAMA4-201ENST00000230538 USO1O60763 962 aaKnown RBP13.38□□□□□ -0.27
LAMA4-201ENST00000230538 IFFO1Q0D2I5 559 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 CATIPQ7Z7H3 387 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 HYPKQ9NX55 129 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 LRPPRCP42704 1394 aaKnown RBP13.37□□□□□ -0.27
LAMA4-201ENST00000230538 YEATS4O95619 227 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 DNA2P51530 1060 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 CCT2P78371 535 aaKnown RBP13.37□□□□□ -0.27
LAMA4-201ENST00000230538 EHMT1Q9H9B1 1298 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 A0A087WZG4 1122 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
LAMA4-201ENST00000230538 KIF20AO95235 890 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
LAMA4-201ENST00000230538 CPLX3Q8WVH0 158 aa13.37□□□□□ -0.27
LAMA4-201ENST00000230538 GSTTP1A0A1W2PQM5 241 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 FSIP1Q8NA03 581 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 SLF2Q8IX21 1173 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 GJB2P29033 226 aa13.36□□□□□ -0.27
LAMA4-201ENST00000230538 RPGRQ92834 1020 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms