RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 IBTKQ9P2D0 1353 aaPredicted RBP17.86■□□□□ 0.45
PRKAB1-201ENST00000229328 ZNF496Q96IT1 587 aaPredicted RBP17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 LRRCC1Q9C099 1032 aa17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 C5P01031 1676 aa17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 TOM1L2Q6ZVM7 507 aa17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 PPP1R42Q7Z4L9 355 aa17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 SSH3Q8TE77 659 aa17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 PDE1AP54750 535 aa17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 TSHZ3Q63HK5 1081 aa17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 KSR2Q6VAB6 950 aa17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 DDX21Q9NR30 783 aaKnown RBP eCLIP17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 HYPKQ9NX55 129 aa17.85■□□□□ 0.45
PRKAB1-201ENST00000229328 AIMP1Q12904 312 aaKnown RBP17.84■□□□□ 0.45
PRKAB1-201ENST00000229328 SLKQ9H2G2 1235 aaPredicted RBP17.84■□□□□ 0.45
PRKAB1-201ENST00000229328 SALL3Q9BXA9 1300 aa17.84■□□□□ 0.45
PRKAB1-201ENST00000229328 COL5A2P05997 1499 aaPredicted RBP17.84■□□□□ 0.45
PRKAB1-201ENST00000229328 MRC1P22897 1456 aa17.83■□□□□ 0.45
PRKAB1-201ENST00000229328 PLEKHG2Q9H7P9 1386 aa17.83■□□□□ 0.44
PRKAB1-201ENST00000229328 NFKBIBQ15653 356 aa17.83■□□□□ 0.44
PRKAB1-201ENST00000229328 CWF19L2Q2TBE0 894 aaKnown RBP17.83■□□□□ 0.44
PRKAB1-201ENST00000229328 KIF2CQ99661 725 aa17.83■□□□□ 0.44
PRKAB1-201ENST00000229328 OSBPL3Q9H4L5 887 aa17.83■□□□□ 0.44
PRKAB1-201ENST00000229328 ABCA3Q99758 1704 aa17.83■□□□□ 0.44
PRKAB1-201ENST00000229328 POLA2Q14181 598 aa17.83■□□□□ 0.44
PRKAB1-201ENST00000229328 SRGAP3O43295 1099 aa17.82■□□□□ 0.44
PRKAB1-201ENST00000229328 MYL6BP14649 208 aa17.82■□□□□ 0.44
PRKAB1-201ENST00000229328 USP16Q9Y5T5 823 aa17.82■□□□□ 0.44
PRKAB1-201ENST00000229328 CABP4P57796 275 aa17.81■□□□□ 0.44
PRKAB1-201ENST00000229328 SPRYD3Q8NCJ5 442 aa17.81■□□□□ 0.44
PRKAB1-201ENST00000229328 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
PRKAB1-201ENST00000229328 ANTXR1Q9H6X2 564 aa17.81■□□□□ 0.44
PRKAB1-201ENST00000229328 STRN4Q9NRL3 753 aa17.81■□□□□ 0.44
PRKAB1-201ENST00000229328 PIP4K2AP48426 406 aaPredicted RBP17.8■□□□□ 0.44
PRKAB1-201ENST00000229328 TTC5Q8N0Z6 440 aa17.8■□□□□ 0.44
PRKAB1-201ENST00000229328 ZCRB1Q8TBF4 217 aaKnown RBP17.8■□□□□ 0.44
PRKAB1-201ENST00000229328 IL1RAPL2Q9NP60 686 aa17.8■□□□□ 0.44
PRKAB1-201ENST00000229328 SURF6O75683 361 aaKnown RBP17.8■□□□□ 0.44
PRKAB1-201ENST00000229328 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
PRKAB1-201ENST00000229328 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
PRKAB1-201ENST00000229328 ALDH1L1O75891 902 aa17.79■□□□□ 0.44
PRKAB1-201ENST00000229328 USP35Q9P2H5 1018 aa17.79■□□□□ 0.44
PRKAB1-201ENST00000229328 MX1P20591 662 aa17.79■□□□□ 0.44
PRKAB1-201ENST00000229328 C9orf78Q9NZ63 289 aaPredicted RBP17.79■□□□□ 0.44
PRKAB1-201ENST00000229328 SNRPA1P09661 255 aaKnown RBP17.78■□□□□ 0.44
PRKAB1-201ENST00000229328 XAGE3Q8WTP9 111 aa17.78■□□□□ 0.44
PRKAB1-201ENST00000229328 PARP4Q9UKK3 1724 aaKnown RBP17.78■□□□□ 0.44
PRKAB1-201ENST00000229328 LINS1Q8NG48 757 aa17.78■□□□□ 0.44
PRKAB1-201ENST00000229328 FMNL2Q96PY5 1086 aa17.78■□□□□ 0.44
PRKAB1-201ENST00000229328 CARD10Q9BWT7 1032 aa17.78■□□□□ 0.44
PRKAB1-201ENST00000229328 PCDH11XQ9BZA7 1347 aa17.77■□□□□ 0.44
PRKAB1-201ENST00000229328 PCDH11YQ9BZA8 1340 aa17.77■□□□□ 0.44
PRKAB1-201ENST00000229328 DDX58O95786 925 aaKnown RBP17.77■□□□□ 0.44
PRKAB1-201ENST00000229328 COPS6Q7L5N1 327 aa17.77■□□□□ 0.44
PRKAB1-201ENST00000229328 LRP10Q7Z4F1 713 aa17.77■□□□□ 0.44
PRKAB1-201ENST00000229328 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
PRKAB1-201ENST00000229328 IGKV5-2P06315 115 aa17.77■□□□□ 0.43
PRKAB1-201ENST00000229328 RIC3Q7Z5B4 369 aa17.77■□□□□ 0.43
PRKAB1-201ENST00000229328 FRAT2O75474 233 aaPredicted RBP17.76■□□□□ 0.43
PRKAB1-201ENST00000229328 IL2RBP14784 551 aa17.76■□□□□ 0.43
PRKAB1-201ENST00000229328 RHPN1Q8TCX5 695 aa17.76■□□□□ 0.43
PRKAB1-201ENST00000229328 RAB11FIP3O75154 756 aa17.76■□□□□ 0.43
PRKAB1-201ENST00000229328 EVA1CP58658 441 aa17.76■□□□□ 0.43
PRKAB1-201ENST00000229328 NUTM1Q86Y26 1132 aa17.76■□□□□ 0.43
PRKAB1-201ENST00000229328 STAP2Q9UGK3 403 aa17.76■□□□□ 0.43
PRKAB1-201ENST00000229328 GLI3P10071 1580 aa17.76■□□□□ 0.43
PRKAB1-201ENST00000229328 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
PRKAB1-201ENST00000229328 DDX54Q8TDD1 881 aaKnown RBP17.75■□□□□ 0.43
PRKAB1-201ENST00000229328 KAZALD1Q96I82 304 aa17.75■□□□□ 0.43
PRKAB1-201ENST00000229328 USP26Q9BXU7 913 aa17.75■□□□□ 0.43
PRKAB1-201ENST00000229328 CD2BP2O95400 341 aaKnown RBP17.75■□□□□ 0.43
PRKAB1-201ENST00000229328 MTX1Q13505 466 aa17.75■□□□□ 0.43
PRKAB1-201ENST00000229328 SUCLG2Q96I99 432 aa17.75■□□□□ 0.43
PRKAB1-201ENST00000229328 GRM8O00222 908 aa17.74■□□□□ 0.43
PRKAB1-201ENST00000229328 SNX21Q969T3 373 aa17.74■□□□□ 0.43
PRKAB1-201ENST00000229328 TUBGCP6Q96RT7 1819 aa17.74■□□□□ 0.43
PRKAB1-201ENST00000229328 DEKP35659 375 aaKnown RBP17.73■□□□□ 0.43
PRKAB1-201ENST00000229328 CASC1Q6TDU7 716 aa17.73■□□□□ 0.43
PRKAB1-201ENST00000229328 UTYO14607 1347 aa17.73■□□□□ 0.43
PRKAB1-201ENST00000229328 UNC5CLQ8IV45 518 aa17.73■□□□□ 0.43
PRKAB1-201ENST00000229328 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
PRKAB1-201ENST00000229328 PA2G4Q9UQ80 394 aaKnown RBP17.73■□□□□ 0.43
PRKAB1-201ENST00000229328 SHANK3Q9BYB0 1731 aa17.72■□□□□ 0.43
PRKAB1-201ENST00000229328 NKX1-1Q15270 411 aaPredicted RBP17.72■□□□□ 0.43
PRKAB1-201ENST00000229328 MYD88Q99836 296 aa17.72■□□□□ 0.43
PRKAB1-201ENST00000229328 NEURL1BA8MQ27 555 aa17.72■□□□□ 0.43
PRKAB1-201ENST00000229328 BICC1Q9H694 974 aaKnown RBP17.72■□□□□ 0.43
PRKAB1-201ENST00000229328 ERVV-2B6SEH9 535 aa17.71■□□□□ 0.43
PRKAB1-201ENST00000229328 ANKRD13DQ6ZTN6 518 aa17.71■□□□□ 0.43
PRKAB1-201ENST00000229328 RILPL2Q969X0 211 aa17.71■□□□□ 0.43
PRKAB1-201ENST00000229328 METTL22Q9BUU2 404 aaPredicted RBP17.71■□□□□ 0.43
PRKAB1-201ENST00000229328 TRIM6-TRIM34B2RNG4 842 aa17.71■□□□□ 0.43
PRKAB1-201ENST00000229328 BTG4Q9NY30 223 aa17.71■□□□□ 0.43
PRKAB1-201ENST00000229328 ERC2O15083 957 aa17.7■□□□□ 0.42
PRKAB1-201ENST00000229328 NEXNQ0ZGT2 675 aa17.7■□□□□ 0.42
PRKAB1-201ENST00000229328 GCKRQ14397 625 aa17.7■□□□□ 0.42
PRKAB1-201ENST00000229328 EIF5BO60841 1220 aaKnown RBP17.69■□□□□ 0.42
PRKAB1-201ENST00000229328 PI4K2BQ8TCG2 481 aa17.69■□□□□ 0.42
PRKAB1-201ENST00000229328 AOX1Q06278 1338 aa17.69■□□□□ 0.42
PRKAB1-201ENST00000229328 NBPF26B4DH59 902 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms