RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 OS9Q13438 667 aaPredicted RBP16.61■□□□□ 0.25
USP5-201ENST00000229268 PPP1R42Q7Z4L9 355 aa16.61■□□□□ 0.25
USP5-201ENST00000229268 ATP5J2-PTCD1G3V325 749 aa16.6■□□□□ 0.25
USP5-201ENST00000229268 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
USP5-201ENST00000229268 KDM6AO15550 1401 aaPredicted RBP16.6■□□□□ 0.25
USP5-201ENST00000229268 C22orf23Q9BZE7 217 aa16.59■□□□□ 0.25
USP5-201ENST00000229268 ATP10DQ9P241 1426 aa16.59■□□□□ 0.25
USP5-201ENST00000229268 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
USP5-201ENST00000229268 BEND3Q5T5X7 828 aa16.58■□□□□ 0.24
USP5-201ENST00000229268 NUTM1Q86Y26 1132 aa16.58■□□□□ 0.24
USP5-201ENST00000229268 CAMTA1Q9Y6Y1 1673 aa16.58■□□□□ 0.24
USP5-201ENST00000229268 GSPT1P15170 499 aaKnown RBP16.58■□□□□ 0.24
USP5-201ENST00000229268 MYD88Q99836 296 aa16.58■□□□□ 0.24
USP5-201ENST00000229268 ALS2Q96Q42 1657 aa16.57■□□□□ 0.24
USP5-201ENST00000229268 FMNL2Q96PY5 1086 aa16.57■□□□□ 0.24
USP5-201ENST00000229268 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
USP5-201ENST00000229268 A1BGP04217 495 aa16.57■□□□□ 0.24
USP5-201ENST00000229268 TBC1D9Q6ZT07 1266 aa16.57■□□□□ 0.24
USP5-201ENST00000229268 PA2G4Q9UQ80 394 aaKnown RBP16.57■□□□□ 0.24
USP5-201ENST00000229268 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
USP5-201ENST00000229268 SIL1Q9H173 461 aa16.57■□□□□ 0.24
USP5-201ENST00000229268 TRIM6-TRIM34B2RNG4 842 aa16.56■□□□□ 0.24
USP5-201ENST00000229268 ATP8B2P98198 1209 aa16.56■□□□□ 0.24
USP5-201ENST00000229268 KSR2Q6VAB6 950 aa16.56■□□□□ 0.24
USP5-201ENST00000229268 RILPL2Q969X0 211 aa16.56■□□□□ 0.24
USP5-201ENST00000229268 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
USP5-201ENST00000229268 ADCY9O60503 1353 aa16.56■□□□□ 0.24
USP5-201ENST00000229268 HYPKQ9NX55 129 aa16.56■□□□□ 0.24
USP5-201ENST00000229268 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
USP5-201ENST00000229268 LRRCC1Q9C099 1032 aa16.55■□□□□ 0.24
USP5-201ENST00000229268 HSP90AB1P08238 724 aaKnown RBP16.55■□□□□ 0.24
USP5-201ENST00000229268 BMP2KLQ5H9B9 411 aa16.55■□□□□ 0.24
USP5-201ENST00000229268 KLHDC4Q8TBB5 520 aa16.55■□□□□ 0.24
USP5-201ENST00000229268 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
USP5-201ENST00000229268 DDX58O95786 925 aaKnown RBP16.54■□□□□ 0.24
USP5-201ENST00000229268 HOXB7P09629 217 aa16.54■□□□□ 0.24
USP5-201ENST00000229268 PDIA6Q15084 440 aa16.54■□□□□ 0.24
USP5-201ENST00000229268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.54■□□□□ 0.24
USP5-201ENST00000229268 CPDO75976 1380 aa16.54■□□□□ 0.24
USP5-201ENST00000229268 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
USP5-201ENST00000229268 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
USP5-201ENST00000229268 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
USP5-201ENST00000229268 PCDH11XQ9BZA7 1347 aa16.54■□□□□ 0.24
USP5-201ENST00000229268 PCDH11YQ9BZA8 1340 aa16.54■□□□□ 0.24
USP5-201ENST00000229268 ASAP1Q9ULH1 1129 aa16.53■□□□□ 0.24
USP5-201ENST00000229268 ANKRD13DQ6ZTN6 518 aa16.53■□□□□ 0.24
USP5-201ENST00000229268 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
USP5-201ENST00000229268 SDSP20132 328 aa16.52■□□□□ 0.24
USP5-201ENST00000229268 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
USP5-201ENST00000229268 TMOD3Q9NYL9 352 aa16.52■□□□□ 0.24
USP5-201ENST00000229268 CHMP4AQ9BY43 222 aa16.52■□□□□ 0.24
USP5-201ENST00000229268 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
USP5-201ENST00000229268 TTC22Q5TAA0 569 aa16.52■□□□□ 0.23
USP5-201ENST00000229268 ACSBG1Q96GR2 724 aa16.52■□□□□ 0.23
USP5-201ENST00000229268 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.23
USP5-201ENST00000229268 COL5A2P05997 1499 aaPredicted RBP16.51■□□□□ 0.23
USP5-201ENST00000229268 TTLL7Q6ZT98 887 aa16.51■□□□□ 0.23
USP5-201ENST00000229268 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
USP5-201ENST00000229268 PDE1AP54750 535 aa16.5■□□□□ 0.23
USP5-201ENST00000229268 NCAPD2Q15021 1401 aa16.5■□□□□ 0.23
USP5-201ENST00000229268 IGKV5-2P06315 115 aa16.5■□□□□ 0.23
USP5-201ENST00000229268 UBE3BQ7Z3V4 1068 aa16.5■□□□□ 0.23
USP5-201ENST00000229268 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
USP5-201ENST00000229268 BICC1Q9H694 974 aaKnown RBP16.5■□□□□ 0.23
USP5-201ENST00000229268 GRM8O00222 908 aa16.49■□□□□ 0.23
USP5-201ENST00000229268 CDC45O75419 566 aa16.49■□□□□ 0.23
USP5-201ENST00000229268 CCDC85AQ96PX6 553 aaPredicted RBP16.49■□□□□ 0.23
USP5-201ENST00000229268 PHRF1Q9P1Y6 1649 aaKnown RBP16.49■□□□□ 0.23
USP5-201ENST00000229268 BECN1Q14457 450 aa16.49■□□□□ 0.23
USP5-201ENST00000229268 LRRC37A3O60309 1634 aa16.49■□□□□ 0.23
USP5-201ENST00000229268 LINS1Q8NG48 757 aa16.48■□□□□ 0.23
USP5-201ENST00000229268 NBPF26B4DH59 902 aa16.48■□□□□ 0.23
USP5-201ENST00000229268 EXOC5O00471 708 aa16.48■□□□□ 0.23
USP5-201ENST00000229268 MX1P20591 662 aa16.48■□□□□ 0.23
USP5-201ENST00000229268 NBPF14Q5TI25 921 aa16.48■□□□□ 0.23
USP5-201ENST00000229268 NBPF10Q6P3W6 841 aaKnown RBP16.48■□□□□ 0.23
USP5-201ENST00000229268 NBPF15Q8N660 670 aa16.48■□□□□ 0.23
USP5-201ENST00000229268 TBC1D2Q9BYX2 928 aa16.48■□□□□ 0.23
USP5-201ENST00000229268 PIGBQ92521 554 aa16.48■□□□□ 0.23
USP5-201ENST00000229268 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
USP5-201ENST00000229268 OVOS2A0A0G2JMS6 1433 aa16.47■□□□□ 0.23
USP5-201ENST00000229268 A0A087WZG4 1122 aa16.46■□□□□ 0.23
USP5-201ENST00000229268 DNAJC10Q8IXB1 793 aa16.46■□□□□ 0.23
USP5-201ENST00000229268 SSH3Q8TE77 659 aa16.46■□□□□ 0.23
USP5-201ENST00000229268 PRIM1P49642 420 aaKnown RBP16.46■□□□□ 0.23
USP5-201ENST00000229268 EPHA10Q5JZY3 1008 aa16.46■□□□□ 0.23
USP5-201ENST00000229268 UNC5CLQ8IV45 518 aa16.46■□□□□ 0.23
USP5-201ENST00000229268 C8orf37Q96NL8 207 aa16.46■□□□□ 0.22
USP5-201ENST00000229268 NEURL1BA8MQ27 555 aa16.45■□□□□ 0.22
USP5-201ENST00000229268 HEG1Q9ULI3 1381 aa16.45■□□□□ 0.22
USP5-201ENST00000229268 COL18A1P39060 1754 aa16.45■□□□□ 0.22
USP5-201ENST00000229268 ERVV-2B6SEH9 535 aa16.44■□□□□ 0.22
USP5-201ENST00000229268 CCDC8Q9H0W5 538 aaPredicted RBP16.44■□□□□ 0.22
USP5-201ENST00000229268 GCKRQ14397 625 aa16.44■□□□□ 0.22
USP5-201ENST00000229268 METTL22Q9BUU2 404 aaPredicted RBP16.44■□□□□ 0.22
USP5-201ENST00000229268 LMO7Q8WWI1 1683 aa16.44■□□□□ 0.22
USP5-201ENST00000229268 FAM177BA6PVY3 158 aa16.44■□□□□ 0.22
USP5-201ENST00000229268 KAZALD1Q96I82 304 aa16.44■□□□□ 0.22
USP5-201ENST00000229268 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.44■□□□□ 0.22
USP5-201ENST00000229268 ALDH1L1O75891 902 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms