RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 GAS2L2Q8NHY3 880 aa13.61□□□□□ -0.23
CDCA3-201ENST00000229265 C20orf194Q5TEA3 1177 aa13.6□□□□□ -0.23
CDCA3-201ENST00000229265 SYT17Q9BSW7 474 aa13.6□□□□□ -0.23
CDCA3-201ENST00000229265 MTFR1LQ9H019 292 aa13.6□□□□□ -0.23
CDCA3-201ENST00000229265 KDM2BQ8NHM5 1336 aa13.6□□□□□ -0.23
CDCA3-201ENST00000229265 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
CDCA3-201ENST00000229265 CHL1O00533 1208 aa13.59□□□□□ -0.23
CDCA3-201ENST00000229265 VAMP4O75379 141 aa13.59□□□□□ -0.23
CDCA3-201ENST00000229265 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
CDCA3-201ENST00000229265 DZIP1LQ8IYY4 767 aaKnown RBP13.59□□□□□ -0.23
CDCA3-201ENST00000229265 CLUAP1Q96AJ1 413 aa13.59□□□□□ -0.23
CDCA3-201ENST00000229265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDCA3-201ENST00000229265 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
CDCA3-201ENST00000229265 LOC102724428A0A0B4J2F2 783 aa13.58□□□□□ -0.24
CDCA3-201ENST00000229265 SIK1P57059 783 aa13.58□□□□□ -0.24
CDCA3-201ENST00000229265 MTHFSDQ2M296 383 aaKnown RBP13.58□□□□□ -0.24
CDCA3-201ENST00000229265 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
CDCA3-201ENST00000229265 IFNL2Q8IZJ0 200 aa13.58□□□□□ -0.24
CDCA3-201ENST00000229265 TFCP2L1Q9NZI6 479 aa13.58□□□□□ -0.24
CDCA3-201ENST00000229265 DDX19BQ9UMR2 479 aa13.58□□□□□ -0.24
CDCA3-201ENST00000229265 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
CDCA3-201ENST00000229265 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
CDCA3-201ENST00000229265 RWDD1Q9H446 243 aaPredicted RBP13.57□□□□□ -0.24
CDCA3-201ENST00000229265 KCPQ6ZWJ8 1503 aa13.57□□□□□ -0.24
CDCA3-201ENST00000229265 SIPA1L3O60292 1781 aaPredicted RBP13.57□□□□□ -0.24
CDCA3-201ENST00000229265 PHF14O94880 888 aa13.56□□□□□ -0.24
CDCA3-201ENST00000229265 SSH1Q8WYL5 1049 aa13.56□□□□□ -0.24
CDCA3-201ENST00000229265 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
CDCA3-201ENST00000229265 FRAT1Q92837 279 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-201ENST00000229265 ARXQ96QS3 562 aa13.56□□□□□ -0.24
CDCA3-201ENST00000229265 SMC4Q9NTJ3 1288 aa13.56□□□□□ -0.24
CDCA3-201ENST00000229265 PPP1R1BQ9UD71 204 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-201ENST00000229265 PLEKHG2Q9H7P9 1386 aa13.56□□□□□ -0.24
CDCA3-201ENST00000229265 MRC1P22897 1456 aa13.55□□□□□ -0.24
CDCA3-201ENST00000229265 SLC39A6Q13433 755 aa13.55□□□□□ -0.24
CDCA3-201ENST00000229265 NFATC2IPQ8NCF5 419 aa13.55□□□□□ -0.24
CDCA3-201ENST00000229265 TSR2Q969E8 191 aaKnown RBP13.55□□□□□ -0.24
CDCA3-201ENST00000229265 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
CDCA3-201ENST00000229265 ZNF831Q5JPB2 1677 aa13.55□□□□□ -0.24
CDCA3-201ENST00000229265 UBR2Q8IWV8 1755 aa13.54□□□□□ -0.24
CDCA3-201ENST00000229265 FTSJ3Q8IY81 847 aaKnown RBP13.54□□□□□ -0.24
CDCA3-201ENST00000229265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.53□□□□□ -0.24
CDCA3-201ENST00000229265 YBX3P16989 372 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDCA3-201ENST00000229265 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
CDCA3-201ENST00000229265 API5Q9BZZ5 524 aaKnown RBP13.53□□□□□ -0.24
CDCA3-201ENST00000229265 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
CDCA3-201ENST00000229265 WWC3Q9ULE0 1092 aa13.53□□□□□ -0.24
CDCA3-201ENST00000229265 NOB1Q9ULX3 412 aaKnown RBP13.53□□□□□ -0.24
CDCA3-201ENST00000229265 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
CDCA3-201ENST00000229265 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-201ENST00000229265 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
CDCA3-201ENST00000229265 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
CDCA3-201ENST00000229265 KCNQ3O43525 872 aa13.52□□□□□ -0.25
CDCA3-201ENST00000229265 TWISTNBQ3B726 338 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-201ENST00000229265 PLEKHO1Q53GL0 409 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-201ENST00000229265 MRPL50Q8N5N7 158 aaKnown RBP13.52□□□□□ -0.25
CDCA3-201ENST00000229265 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
CDCA3-201ENST00000229265 PTCD1O75127 700 aaKnown RBP13.51□□□□□ -0.25
CDCA3-201ENST00000229265 ATP6V1AP38606 617 aa13.51□□□□□ -0.25
CDCA3-201ENST00000229265 HDAC1Q13547 482 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-201ENST00000229265 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
CDCA3-201ENST00000229265 DCAF5Q96JK2 942 aa13.51□□□□□ -0.25
CDCA3-201ENST00000229265 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
CDCA3-201ENST00000229265 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-201ENST00000229265 MAP3K5Q99683 1374 aa13.5□□□□□ -0.25
CDCA3-201ENST00000229265 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
CDCA3-201ENST00000229265 GNPATO15228 680 aa13.5□□□□□ -0.25
CDCA3-201ENST00000229265 MSH5O43196 834 aa13.5□□□□□ -0.25
CDCA3-201ENST00000229265 TRIM27P14373 513 aa13.5□□□□□ -0.25
CDCA3-201ENST00000229265 INTS5Q6P9B9 1019 aaKnown RBP13.5□□□□□ -0.25
CDCA3-201ENST00000229265 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
CDCA3-201ENST00000229265 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
CDCA3-201ENST00000229265 LAS1LQ9Y4W2 734 aaKnown RBP13.5□□□□□ -0.25
CDCA3-201ENST00000229265 DLG5Q8TDM6 1919 aa13.49□□□□□ -0.25
CDCA3-201ENST00000229265 CABP4P57796 275 aa13.49□□□□□ -0.25
CDCA3-201ENST00000229265 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
CDCA3-201ENST00000229265 BACH2Q9BYV9 841 aa13.49□□□□□ -0.25
CDCA3-201ENST00000229265 PTPRCP08575 1304 aa13.48□□□□□ -0.25
CDCA3-201ENST00000229265 TAF7Q15545 349 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-201ENST00000229265 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-201ENST00000229265 SLC52A2Q9HAB3 445 aa13.48□□□□□ -0.25
CDCA3-201ENST00000229265 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
CDCA3-201ENST00000229265 KIF13BQ9NQT8 1826 aa13.48□□□□□ -0.25
CDCA3-201ENST00000229265 PRAMEF22A3QJZ6 481 aa13.47□□□□□ -0.25
CDCA3-201ENST00000229265 RLBP1P12271 317 aa13.47□□□□□ -0.25
CDCA3-201ENST00000229265 PDE4AP27815 886 aa13.47□□□□□ -0.25
CDCA3-201ENST00000229265 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
CDCA3-201ENST00000229265 AKAP4Q5JQC9 854 aa13.47□□□□□ -0.25
CDCA3-201ENST00000229265 SLC16A10Q8TF71 515 aa13.47□□□□□ -0.25
CDCA3-201ENST00000229265 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
CDCA3-201ENST00000229265 AK7Q96M32 723 aa13.47□□□□□ -0.25
CDCA3-201ENST00000229265 ZBTB7BO15156 539 aaPredicted RBP13.46□□□□□ -0.25
CDCA3-201ENST00000229265 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.25
CDCA3-201ENST00000229265 C8orf58Q8NAV2 365 aa13.46□□□□□ -0.25
CDCA3-201ENST00000229265 IGHDP01880 384 aa13.45□□□□□ -0.26
CDCA3-201ENST00000229265 HOXB7P09629 217 aa13.45□□□□□ -0.26
CDCA3-201ENST00000229265 GYS1P13807 737 aa13.45□□□□□ -0.26
CDCA3-201ENST00000229265 INTS3Q68E01 1043 aaKnown RBP13.45□□□□□ -0.26
CDCA3-201ENST00000229265 CHD4Q14839 1912 aa13.45□□□□□ -0.26
CDCA3-201ENST00000229265 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms