RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 IL17REQ8NFR9 667 aa13.96□□□□□ -0.17
RPS13-201ENST00000228140 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.17
RPS13-201ENST00000228140 DLEC1Q9Y238 1755 aa13.96□□□□□ -0.18
RPS13-201ENST00000228140 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.18
RPS13-201ENST00000228140 FMNL2Q96PY5 1086 aa13.95□□□□□ -0.18
RPS13-201ENST00000228140 SRP68Q9UHB9 627 aaKnown RBP13.95□□□□□ -0.18
RPS13-201ENST00000228140 NARFQ9UHQ1 456 aa13.95□□□□□ -0.18
RPS13-201ENST00000228140 ZBTB1Q9Y2K1 713 aa13.95□□□□□ -0.18
RPS13-201ENST00000228140 LAMB4A4D0S4 1761 aa13.95□□□□□ -0.18
RPS13-201ENST00000228140 BCORQ6W2J9 1755 aa13.94□□□□□ -0.18
RPS13-201ENST00000228140 A0A087WZG4 1122 aa13.94□□□□□ -0.18
RPS13-201ENST00000228140 FKBP8Q14318 412 aa13.94□□□□□ -0.18
RPS13-201ENST00000228140 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
RPS13-201ENST00000228140 ATP10DQ9P241 1426 aa13.93□□□□□ -0.18
RPS13-201ENST00000228140 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
RPS13-201ENST00000228140 HTATSF1O43719 755 aaKnown RBP13.93□□□□□ -0.18
RPS13-201ENST00000228140 GIGYF1O75420 1035 aaPredicted RBP13.93□□□□□ -0.18
RPS13-201ENST00000228140 USPL1Q5W0Q7 1092 aa13.93□□□□□ -0.18
RPS13-201ENST00000228140 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
RPS13-201ENST00000228140 ZNF496Q96IT1 587 aaPredicted RBP13.93□□□□□ -0.18
RPS13-201ENST00000228140 GOLGB1Q14789 3259 aaKnown RBP13.93□□□□□ -0.18
RPS13-201ENST00000228140 ADCY9O60503 1353 aa13.93□□□□□ -0.18
RPS13-201ENST00000228140 KDM3BQ7LBC6 1761 aa13.92□□□□□ -0.18
RPS13-201ENST00000228140 CANXP27824 592 aaKnown RBP13.92□□□□□ -0.18
RPS13-201ENST00000228140 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
RPS13-201ENST00000228140 WWC3Q9ULE0 1092 aa13.92□□□□□ -0.18
RPS13-201ENST00000228140 A0A0G2JLW4 131 aa13.91□□□□□ -0.18
RPS13-201ENST00000228140 POLRMTO00411 1230 aaKnown RBP13.91□□□□□ -0.18
RPS13-201ENST00000228140 DDR1Q08345 913 aa13.91□□□□□ -0.18
RPS13-201ENST00000228140 BCS1LQ9Y276 419 aa13.91□□□□□ -0.18
RPS13-201ENST00000228140 DPEP1P16444 411 aa13.9□□□□□ -0.18
RPS13-201ENST00000228140 TM4SF1P30408 202 aa13.9□□□□□ -0.18
RPS13-201ENST00000228140 IL6STP40189 918 aaPredicted RBP13.9□□□□□ -0.18
RPS13-201ENST00000228140 EIF5P55010 431 aaKnown RBP13.9□□□□□ -0.18
RPS13-201ENST00000228140 PIM2Q9P1W9 311 aa13.9□□□□□ -0.18
RPS13-201ENST00000228140 C1QTNF8P60827 252 aa13.89□□□□□ -0.19
RPS13-201ENST00000228140 RALBP1Q15311 655 aa13.89□□□□□ -0.19
RPS13-201ENST00000228140 MCM10Q7L590 875 aa13.89□□□□□ -0.19
RPS13-201ENST00000228140 GPBP1L1Q9HC44 474 aaPredicted RBP13.89□□□□□ -0.19
RPS13-201ENST00000228140 MAPK8IP3Q9UPT6 1336 aa13.89□□□□□ -0.19
RPS13-201ENST00000228140 NFIXQ14938 502 aa13.88□□□□□ -0.19
RPS13-201ENST00000228140 DALRD3Q5D0E6 543 aaKnown RBP13.88□□□□□ -0.19
RPS13-201ENST00000228140 ZNF330Q9Y3S2 320 aaPredicted RBP13.88□□□□□ -0.19
RPS13-201ENST00000228140 ANKRD31Q8N7Z5 1873 aa13.88□□□□□ -0.19
RPS13-201ENST00000228140 SBF1O95248 1867 aa13.87□□□□□ -0.19
RPS13-201ENST00000228140 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
RPS13-201ENST00000228140 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
RPS13-201ENST00000228140 CARMIL3Q8ND23 1372 aa13.86□□□□□ -0.19
RPS13-201ENST00000228140 SERPINB2P05120 415 aa13.86□□□□□ -0.19
RPS13-201ENST00000228140 ARHGAP27Q6ZUM4 889 aa13.86□□□□□ -0.19
RPS13-201ENST00000228140 BCL2L12Q9HB09 334 aa13.86□□□□□ -0.19
RPS13-201ENST00000228140 ARFGEF2Q9Y6D5 1785 aa13.86□□□□□ -0.19
RPS13-201ENST00000228140 TAF7Q15545 349 aaPredicted RBP13.85□□□□□ -0.19
RPS13-201ENST00000228140 PDZRN3Q9UPQ7 1066 aa13.85□□□□□ -0.19
RPS13-201ENST00000228140 CACNA1SQ13698 1873 aa13.84□□□□□ -0.19
RPS13-201ENST00000228140 COL11A2P13942 1736 aaPredicted RBP13.84□□□□□ -0.19
RPS13-201ENST00000228140 KCNA3P22001 575 aa13.84□□□□□ -0.19
RPS13-201ENST00000228140 DCTN1Q14203 1278 aa13.84□□□□□ -0.19
RPS13-201ENST00000228140 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
RPS13-201ENST00000228140 ZNF652Q9Y2D9 606 aa13.84□□□□□ -0.19
RPS13-201ENST00000228140 CCDC88AQ3V6T2 1871 aa13.83□□□□□ -0.2
RPS13-201ENST00000228140 TNRC6CQ9HCJ0 1690 aaKnown RBP13.83□□□□□ -0.2
RPS13-201ENST00000228140 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.2
RPS13-201ENST00000228140 KCNQ3O43525 872 aa13.83□□□□□ -0.2
RPS13-201ENST00000228140 A1BGP04217 495 aa13.83□□□□□ -0.2
RPS13-201ENST00000228140 CHRNA5P30532 468 aa13.83□□□□□ -0.2
RPS13-201ENST00000228140 BICDL1Q6ZP65 573 aa13.83□□□□□ -0.2
RPS13-201ENST00000228140 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.2
RPS13-201ENST00000228140 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
RPS13-201ENST00000228140 TBC1D2BQ9UPU7 963 aa13.83□□□□□ -0.2
RPS13-201ENST00000228140 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
RPS13-201ENST00000228140 TIAM2Q8IVF5 1701 aa13.82□□□□□ -0.2
RPS13-201ENST00000228140 H0YIN7 160 aa13.82□□□□□ -0.2
RPS13-201ENST00000228140 RGL2O15211 777 aa13.82□□□□□ -0.2
RPS13-201ENST00000228140 NPHP1O15259 732 aa13.82□□□□□ -0.2
RPS13-201ENST00000228140 PDE6BP35913 854 aa13.82□□□□□ -0.2
RPS13-201ENST00000228140 ZNF526Q8TF50 670 aaPredicted RBP13.82□□□□□ -0.2
RPS13-201ENST00000228140 SETDB2Q96T68 719 aa13.82□□□□□ -0.2
RPS13-201ENST00000228140 USP16Q9Y5T5 823 aa13.82□□□□□ -0.2
RPS13-201ENST00000228140 NUP98P52948 1817 aa13.81□□□□□ -0.2
RPS13-201ENST00000228140 CAMTA2O94983 1202 aa13.81□□□□□ -0.2
RPS13-201ENST00000228140 LMOD3Q0VAK6 560 aa13.81□□□□□ -0.2
RPS13-201ENST00000228140 DDX10Q13206 875 aaKnown RBP13.81□□□□□ -0.2
RPS13-201ENST00000228140 TBC1D9BQ66K14 1250 aa13.81□□□□□ -0.2
RPS13-201ENST00000228140 CLEC4GQ6UXB4 293 aa13.81□□□□□ -0.2
RPS13-201ENST00000228140 C2CD5Q86YS7 1000 aa13.81□□□□□ -0.2
RPS13-201ENST00000228140 ST5P78524 1137 aa13.8□□□□□ -0.2
RPS13-201ENST00000228140 TTLL6Q8N841 843 aa13.8□□□□□ -0.2
RPS13-201ENST00000228140 CNBD1Q8NA66 436 aa13.8□□□□□ -0.2
RPS13-201ENST00000228140 BRIP1Q9BX63 1249 aa13.8□□□□□ -0.2
RPS13-201ENST00000228140 DICER1Q9UPY3 1922 aaKnown RBP13.8□□□□□ -0.2
RPS13-201ENST00000228140 FER1L6Q2WGJ9 1857 aa13.79□□□□□ -0.2
RPS13-201ENST00000228140 PRR5LQ6MZQ0 368 aa13.79□□□□□ -0.2
RPS13-201ENST00000228140 ZC3H4Q9UPT8 1303 aaKnown RBP13.79□□□□□ -0.2
RPS13-201ENST00000228140 PRAMEF22A3QJZ6 481 aa13.78□□□□□ -0.2
RPS13-201ENST00000228140 C9orf131Q5VYM1 1079 aa13.78□□□□□ -0.2
RPS13-201ENST00000228140 WDR43Q15061 677 aaKnown RBP eCLIP13.77□□□□□ -0.211e-62■■■■□ 19.7
RPS13-201ENST00000228140 ERBB4Q15303 1308 aa13.77□□□□□ -0.21
RPS13-201ENST00000228140 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.21
RPS13-201ENST00000228140 BABAM1Q9NWV8 329 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms