RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.22■□□□□ 0.19
NFKB1-201ENST00000226574 CFAP65Q6ZU64 1925 aaKnown RBP16.22■□□□□ 0.19
NFKB1-201ENST00000226574 UBE2HP62256 183 aa16.22■□□□□ 0.19
NFKB1-201ENST00000226574 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
NFKB1-201ENST00000226574 NOC3LQ8WTT2 800 aaKnown RBP16.22■□□□□ 0.19
NFKB1-201ENST00000226574 DACT1Q9NYF0 836 aa16.22■□□□□ 0.19
NFKB1-201ENST00000226574 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
NFKB1-201ENST00000226574 TPM1P09493 284 aa16.21■□□□□ 0.19
NFKB1-201ENST00000226574 AK2P54819 239 aa16.21■□□□□ 0.19
NFKB1-201ENST00000226574 HSP90AA4PQ58FG1 418 aa16.21■□□□□ 0.19
NFKB1-201ENST00000226574 ZNF396Q96N95 335 aaPredicted RBP16.21■□□□□ 0.19
NFKB1-201ENST00000226574 MYD88Q99836 296 aa16.21■□□□□ 0.19
NFKB1-201ENST00000226574 LMBRD1Q9NUN5 540 aa16.21■□□□□ 0.19
NFKB1-201ENST00000226574 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.19
NFKB1-201ENST00000226574 ARGLU1Q9NWB6 273 aaPredicted RBP16.2■□□□□ 0.18
NFKB1-201ENST00000226574 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 MAP3K2Q9Y2U5 619 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 HAND2P61296 217 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 CEP57L1Q8IYX8 460 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 RAD21O60216 631 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 POLR3DP05423 398 aaPredicted RBP16.2■□□□□ 0.18
NFKB1-201ENST00000226574 CHMLP26374 656 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 TEX35Q5T0J7 233 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 PIBF1Q8WXW3 757 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 NSD2O96028 1365 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 PLCH2O75038 1416 aa16.2■□□□□ 0.18
NFKB1-201ENST00000226574 PNMA6EA0A0J9YXQ4 647 aa16.19■□□□□ 0.18
NFKB1-201ENST00000226574 SCAND2PQ9GZW5 306 aaPredicted RBP16.19■□□□□ 0.18
NFKB1-201ENST00000226574 MARCH6O60337 910 aa16.19■□□□□ 0.18
NFKB1-201ENST00000226574 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
NFKB1-201ENST00000226574 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
NFKB1-201ENST00000226574 SYT1P21579 422 aa16.19■□□□□ 0.18
NFKB1-201ENST00000226574 CFAP100Q494V2 611 aa16.19■□□□□ 0.18
NFKB1-201ENST00000226574 DDX46Q7L014 1031 aaKnown RBP16.19■□□□□ 0.18
NFKB1-201ENST00000226574 BRF1Q92994 677 aa16.18■□□□□ 0.18
NFKB1-201ENST00000226574 DNAJC25Q9H1X3 360 aa16.18■□□□□ 0.18
NFKB1-201ENST00000226574 DYNC1I1O14576 645 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 ATP8B2P98198 1209 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
NFKB1-201ENST00000226574 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 LUZP1Q86V48 1076 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 STRN4Q9NRL3 753 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 RBM8AQ9Y5S9 174 aaKnown RBP16.17■□□□□ 0.18
NFKB1-201ENST00000226574 CHST3Q7LGC8 479 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 VPS37DQ86XT2 251 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 PALD1Q9ULE6 856 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 ERICH2A1L162 156 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 NUP133Q8WUM0 1156 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 MSH6P52701 1360 aa16.17■□□□□ 0.18
NFKB1-201ENST00000226574 IDH1O75874 414 aaKnown RBP16.16■□□□□ 0.18
NFKB1-201ENST00000226574 PTGS1P23219 599 aa16.16■□□□□ 0.18
NFKB1-201ENST00000226574 SLC39A6Q13433 755 aa16.16■□□□□ 0.18
NFKB1-201ENST00000226574 SH2B1Q9NRF2 756 aaPredicted RBP16.16■□□□□ 0.18
NFKB1-201ENST00000226574 CGNQ9P2M7 1197 aaKnown RBP16.16■□□□□ 0.18
NFKB1-201ENST00000226574 TTC39AQ5SRH9 613 aa16.16■□□□□ 0.18
NFKB1-201ENST00000226574 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
NFKB1-201ENST00000226574 PTPRTO14522 1441 aa16.16■□□□□ 0.18
NFKB1-201ENST00000226574 FSIP1Q8NA03 581 aa16.16■□□□□ 0.18
NFKB1-201ENST00000226574 F13A1P00488 732 aa16.15■□□□□ 0.18
NFKB1-201ENST00000226574 VPS53Q5VIR6 699 aa16.15■□□□□ 0.18
NFKB1-201ENST00000226574 CEP126Q9P2H0 1117 aa16.15■□□□□ 0.18
NFKB1-201ENST00000226574 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
NFKB1-201ENST00000226574 IPO7O95373 1038 aaKnown RBP16.15■□□□□ 0.18
NFKB1-201ENST00000226574 GPS2Q13227 327 aa16.15■□□□□ 0.18
NFKB1-201ENST00000226574 CCDC144CPQ8IYA2 1237 aa16.15■□□□□ 0.18
NFKB1-201ENST00000226574 GOLIM4O00461 696 aa16.15■□□□□ 0.18
NFKB1-201ENST00000226574 POLR3GO15318 223 aaPredicted RBP16.15■□□□□ 0.18
NFKB1-201ENST00000226574 URI1O94763 535 aaPredicted RBP16.15■□□□□ 0.18
NFKB1-201ENST00000226574 CABP4P57796 275 aa16.15■□□□□ 0.18
NFKB1-201ENST00000226574 CNNM1Q9NRU3 951 aa16.15■□□□□ 0.18
NFKB1-201ENST00000226574 TTC21BQ7Z4L5 1316 aa16.15■□□□□ 0.18
NFKB1-201ENST00000226574 CCDC158Q5M9N0 1113 aa16.14■□□□□ 0.18
NFKB1-201ENST00000226574 HOOK1Q9UJC3 728 aaKnown RBP16.14■□□□□ 0.18
NFKB1-201ENST00000226574 NPC1L1Q9UHC9 1359 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 KDM5CP41229 1560 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 SFPQP23246 707 aaKnown RBP eCLIP16.14■□□□□ 0.17
NFKB1-201ENST00000226574 KLHL10Q6JEL2 608 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 DBF4Q9UBU7 674 aaPredicted RBP16.14■□□□□ 0.17
NFKB1-201ENST00000226574 NOL7Q9UMY1 257 aaKnown RBP16.14■□□□□ 0.17
NFKB1-201ENST00000226574 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 BCORL1Q5H9F3 1711 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 A0A087WZG4 1122 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 FSD2A1L4K1 749 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 MCM5P33992 734 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 KLHDC4Q8TBB5 520 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 ZSWIM4Q9H7M6 989 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 NDUFB9Q9Y6M9 179 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 ADGRL2O95490 1459 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 UBXN4Q92575 508 aa16.14■□□□□ 0.17
NFKB1-201ENST00000226574 TATP17735 454 aaPredicted RBP16.13■□□□□ 0.17
NFKB1-201ENST00000226574 EYA1Q99502 592 aa16.13■□□□□ 0.17
NFKB1-201ENST00000226574 IL13P35225 146 aa16.13■□□□□ 0.17
NFKB1-201ENST00000226574 CCDC57Q2TAC2 916 aa16.13■□□□□ 0.17
NFKB1-201ENST00000226574 NAP1L1P55209 391 aaKnown RBP16.12■□□□□ 0.17
NFKB1-201ENST00000226574 KRT32Q14532 448 aa16.12■□□□□ 0.17
NFKB1-201ENST00000226574 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
NFKB1-201ENST00000226574 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
NFKB1-201ENST00000226574 LRRC59Q96AG4 307 aaKnown RBP16.12■□□□□ 0.17
NFKB1-201ENST00000226574 HSP90B2PQ58FF3 399 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms