RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 ADAMTS8Q9UP79 889 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 COL18A1P39060 1754 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 CYP27B1O15528 508 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 RPS6KA4O75676 772 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 PDE6BP35913 854 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 SOGA3Q5TF21 947 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 BCS1LQ9Y276 419 aa6.69□□□□□ -1.34
RUFY3-201ENST00000226328 VSIG10Q8N0Z9 540 aa6.68□□□□□ -1.34
RUFY3-201ENST00000226328 ASAP1Q9ULH1 1129 aa6.68□□□□□ -1.34
RUFY3-201ENST00000226328 NFAT5O94916 1531 aa6.68□□□□□ -1.34
RUFY3-201ENST00000226328 ANKRD26Q9UPS8 1709 aa6.68□□□□□ -1.34
RUFY3-201ENST00000226328 NLRP3Q96P20 1036 aa6.68□□□□□ -1.34
RUFY3-201ENST00000226328 SMC4Q9NTJ3 1288 aa6.68□□□□□ -1.34
RUFY3-201ENST00000226328 NIP7Q9Y221 180 aaKnown RBP eCLIP6.68□□□□□ -1.34
RUFY3-201ENST00000226328 KIF20BQ96Q89 1820 aa6.68□□□□□ -1.34
RUFY3-201ENST00000226328 PER1O15534 1290 aaPredicted RBP6.68□□□□□ -1.34
RUFY3-201ENST00000226328 DDX46Q7L014 1031 aaKnown RBP6.68□□□□□ -1.34
RUFY3-201ENST00000226328 PARP10Q53GL7 1025 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 RC3H1Q5TC82 1133 aaKnown RBP6.67□□□□□ -1.34
RUFY3-201ENST00000226328 JDP2Q8WYK2 163 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 IFT57Q9NWB7 429 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 CRKLP46109 303 aaKnown RBP6.67□□□□□ -1.34
RUFY3-201ENST00000226328 DCTN1Q14203 1278 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 FRAT1Q92837 279 aaPredicted RBP6.67□□□□□ -1.34
RUFY3-201ENST00000226328 CNKSR1Q969H4 720 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 TRMT112Q9UI30 125 aaKnown RBP6.67□□□□□ -1.34
RUFY3-201ENST00000226328 TBC1D2BQ9UPU7 963 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 WNK3Q9BYP7 1800 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 GORABQ5T7V8 394 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 DPY19L2Q6NUT2 758 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 VPS37DQ86XT2 251 aa6.67□□□□□ -1.34
RUFY3-201ENST00000226328 MMP10P09238 476 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 TWISTNBQ3B726 338 aaPredicted RBP6.66□□□□□ -1.34
RUFY3-201ENST00000226328 ARHGAP27Q6ZUM4 889 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 API5Q9BZZ5 524 aaKnown RBP6.66□□□□□ -1.34
RUFY3-201ENST00000226328 RSPH6AQ9H0K4 717 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 PLEKHG2Q9H7P9 1386 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 IL6STP40189 918 aaPredicted RBP6.66□□□□□ -1.34
RUFY3-201ENST00000226328 WDR63Q8IWG1 891 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 ERBB4Q15303 1308 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 NCAPD2Q15021 1401 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 SENP3-EIF4A1A0A087X0R7 540 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 ALDH1B1P30837 517 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 DUSP27Q5VZP5 1158 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 ZBTB3Q9H5J0 574 aa6.66□□□□□ -1.34
RUFY3-201ENST00000226328 SOS1Q07889 1333 aaPredicted RBP6.66□□□□□ -1.34
RUFY3-201ENST00000226328 CAMTA1Q9Y6Y1 1673 aa6.65□□□□□ -1.34
RUFY3-201ENST00000226328 NKX1-1Q15270 411 aaPredicted RBP6.65□□□□□ -1.34
RUFY3-201ENST00000226328 MPHOSPH8Q99549 860 aa6.65□□□□□ -1.34
RUFY3-201ENST00000226328 LGR6Q9HBX8 967 aa6.65□□□□□ -1.34
RUFY3-201ENST00000226328 ZNF219Q9P2Y4 722 aaPredicted RBP6.65□□□□□ -1.34
RUFY3-201ENST00000226328 IGHMBP2P38935 993 aaKnown RBP6.65□□□□□ -1.34
RUFY3-201ENST00000226328 FBXW7Q969H0 707 aa6.65□□□□□ -1.34
RUFY3-201ENST00000226328 ZNF496Q96IT1 587 aaPredicted RBP6.65□□□□□ -1.34
RUFY3-201ENST00000226328 MIS18AQ9NYP9 233 aa6.65□□□□□ -1.34
RUFY3-201ENST00000226328 DALRD3Q5D0E6 543 aaKnown RBP6.65□□□□□ -1.35
RUFY3-201ENST00000226328 ZNF428Q96B54 188 aa6.65□□□□□ -1.35
RUFY3-201ENST00000226328 UTP14AQ9BVJ6 771 aaKnown RBP6.65□□□□□ -1.35
RUFY3-201ENST00000226328 ATG3Q9NT62 314 aa6.65□□□□□ -1.35
RUFY3-201ENST00000226328 PIM2Q9P1W9 311 aa6.65□□□□□ -1.35
RUFY3-201ENST00000226328 THSD7AQ9UPZ6 1657 aa6.65□□□□□ -1.35
RUFY3-201ENST00000226328 HOXB7P09629 217 aa6.65□□□□□ -1.35
RUFY3-201ENST00000226328 GPTP24298 496 aa6.65□□□□□ -1.35
RUFY3-201ENST00000226328 LMOD1P29536 600 aaPredicted RBP6.65□□□□□ -1.35
RUFY3-201ENST00000226328 SUPT20HQ8NEM7 779 aa6.65□□□□□ -1.35
RUFY3-201ENST00000226328 RBM17Q96I25 401 aaKnown RBP6.65□□□□□ -1.35
RUFY3-201ENST00000226328 CAMKK2Q96RR4 588 aa6.65□□□□□ -1.35
RUFY3-201ENST00000226328 CDC5LQ99459 802 aaKnown RBP6.65□□□□□ -1.35
RUFY3-201ENST00000226328 GLI3P10071 1580 aa6.64□□□□□ -1.35
RUFY3-201ENST00000226328 KCNQ4P56696 695 aa6.64□□□□□ -1.35
RUFY3-201ENST00000226328 C2CD5Q86YS7 1000 aa6.64□□□□□ -1.35
RUFY3-201ENST00000226328 NPM3O75607 178 aaKnown RBP6.64□□□□□ -1.35
RUFY3-201ENST00000226328 THUMPD2Q9BTF0 503 aaKnown RBP6.64□□□□□ -1.35
RUFY3-201ENST00000226328 TCERG1O14776 1098 aaKnown RBP6.64□□□□□ -1.35
RUFY3-201ENST00000226328 USPL1Q5W0Q7 1092 aa6.64□□□□□ -1.35
RUFY3-201ENST00000226328 ANKRD13DQ6ZTN6 518 aa6.64□□□□□ -1.35
RUFY3-201ENST00000226328 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.64□□□□□ -1.35
RUFY3-201ENST00000226328 LTN1O94822 1766 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 SERPINB2P05120 415 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 EYA3Q99504 573 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 WWC3Q9ULE0 1092 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 HMMRO75330 724 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 SLC4A2P04920 1241 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 EIF6P56537 245 aaKnown RBP6.63□□□□□ -1.35
RUFY3-201ENST00000226328 CC2D2BQ6DHV5 1058 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 KIF16BQ96L93 1317 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 CT47B1P0C2W7 299 aaPredicted RBP6.63□□□□□ -1.35
RUFY3-201ENST00000226328 PHACTR3Q96KR7 559 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 NOL10Q9BSC4 688 aaKnown RBP6.63□□□□□ -1.35
RUFY3-201ENST00000226328 NARFQ9UHQ1 456 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 CLEC11AQ9Y240 323 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 CNTNAP4Q9C0A0 1308 aa6.63□□□□□ -1.35
RUFY3-201ENST00000226328 C6orf229H3BNL8 230 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 CCDC57Q2TAC2 916 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 CCDC152Q4G0S7 254 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 DDX21Q9NR30 783 aaKnown RBP eCLIP6.62□□□□□ -1.35
RUFY3-201ENST00000226328 CWC25Q9NXE8 425 aaPredicted RBP6.62□□□□□ -1.35
RUFY3-201ENST00000226328 CD2APQ9Y5K6 639 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 A1BGP04217 495 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 CLEC4GQ6UXB4 293 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms