RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 SOS1Q07889 1333 aaPredicted RBP17.96■□□□□ 0.46
UPK1A-201ENST00000222275 DDR1Q08345 913 aa17.95■□□□□ 0.46
UPK1A-201ENST00000222275 ZNF790Q6PG37 636 aa17.95■□□□□ 0.46
UPK1A-201ENST00000222275 BCL2L12Q9HB09 334 aa17.95■□□□□ 0.46
UPK1A-201ENST00000222275 USP42Q9H9J4 1324 aaKnown RBP17.95■□□□□ 0.46
UPK1A-201ENST00000222275 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
UPK1A-201ENST00000222275 TM4SF1P30408 202 aa17.94■□□□□ 0.46
UPK1A-201ENST00000222275 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
UPK1A-201ENST00000222275 A0A0G2JLW4 131 aa17.93■□□□□ 0.46
UPK1A-201ENST00000222275 PRAMEF22A3QJZ6 481 aa17.93■□□□□ 0.46
UPK1A-201ENST00000222275 TEFQ10587 303 aa17.93■□□□□ 0.46
UPK1A-201ENST00000222275 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
UPK1A-201ENST00000222275 USPL1Q5W0Q7 1092 aa17.93■□□□□ 0.46
UPK1A-201ENST00000222275 FAM9BQ8IZU0 186 aa17.93■□□□□ 0.46
UPK1A-201ENST00000222275 VSIG10Q8N0Z9 540 aa17.93■□□□□ 0.46
UPK1A-201ENST00000222275 RTF1Q92541 710 aaKnown RBP17.93■□□□□ 0.46
UPK1A-201ENST00000222275 KCNA3P22001 575 aa17.92■□□□□ 0.46
UPK1A-201ENST00000222275 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
UPK1A-201ENST00000222275 A1BGP04217 495 aa17.91■□□□□ 0.46
UPK1A-201ENST00000222275 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
UPK1A-201ENST00000222275 MIS18AQ9NYP9 233 aa17.91■□□□□ 0.46
UPK1A-201ENST00000222275 BTBD11A6QL63 1104 aa17.9■□□□□ 0.46
UPK1A-201ENST00000222275 EIF5P55010 431 aaKnown RBP17.9■□□□□ 0.46
UPK1A-201ENST00000222275 CCDC146Q8IYE0 955 aa17.9■□□□□ 0.46
UPK1A-201ENST00000222275 NGEFQ8N5V2 710 aa17.9■□□□□ 0.46
UPK1A-201ENST00000222275 USP16Q9Y5T5 823 aa17.9■□□□□ 0.46
UPK1A-201ENST00000222275 CICQ96RK0 1608 aaPredicted RBP17.9■□□□□ 0.46
UPK1A-201ENST00000222275 HEG1Q9ULI3 1381 aa17.9■□□□□ 0.46
UPK1A-201ENST00000222275 POLRMTO00411 1230 aaKnown RBP17.89■□□□□ 0.45
UPK1A-201ENST00000222275 DPEP1P16444 411 aa17.89■□□□□ 0.45
UPK1A-201ENST00000222275 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
UPK1A-201ENST00000222275 NARFQ9UHQ1 456 aa17.89■□□□□ 0.45
UPK1A-201ENST00000222275 C4AP0C0L4 1744 aa17.89■□□□□ 0.45
UPK1A-201ENST00000222275 GRIN3BO60391 1043 aa17.88■□□□□ 0.45
UPK1A-201ENST00000222275 TMPOP42166 694 aaKnown RBP17.88■□□□□ 0.45
UPK1A-201ENST00000222275 PIP4K2AP48426 406 aaPredicted RBP17.88■□□□□ 0.45
UPK1A-201ENST00000222275 RIPK4P57078 832 aa17.88■□□□□ 0.45
UPK1A-201ENST00000222275 NFIXQ14938 502 aa17.88■□□□□ 0.45
UPK1A-201ENST00000222275 TTC5Q8N0Z6 440 aa17.88■□□□□ 0.45
UPK1A-201ENST00000222275 THUMPD2Q9BTF0 503 aaKnown RBP17.88■□□□□ 0.45
UPK1A-201ENST00000222275 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
UPK1A-201ENST00000222275 SIPA1L3O60292 1781 aaPredicted RBP17.88■□□□□ 0.45
UPK1A-201ENST00000222275 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
UPK1A-201ENST00000222275 UBR2Q8IWV8 1755 aa17.87■□□□□ 0.45
UPK1A-201ENST00000222275 CHD4Q14839 1912 aa17.87■□□□□ 0.45
UPK1A-201ENST00000222275 C10orf71Q711Q0 1435 aa17.87■□□□□ 0.45
UPK1A-201ENST00000222275 ZPR1O75312 459 aa17.86■□□□□ 0.45
UPK1A-201ENST00000222275 STARD3NLO95772 234 aa17.86■□□□□ 0.45
UPK1A-201ENST00000222275 FMNL2Q96PY5 1086 aa17.86■□□□□ 0.45
UPK1A-201ENST00000222275 APAF1O14727 1248 aa17.85■□□□□ 0.45
UPK1A-201ENST00000222275 COL15A1P39059 1388 aa17.85■□□□□ 0.45
UPK1A-201ENST00000222275 TGFB2P61812 414 aa17.85■□□□□ 0.45
UPK1A-201ENST00000222275 KIAA1551Q9HCM1 1747 aa17.85■□□□□ 0.45
UPK1A-201ENST00000222275 TBC1D2BQ9UPU7 963 aa17.85■□□□□ 0.45
UPK1A-201ENST00000222275 CHRNA5P30532 468 aa17.84■□□□□ 0.45
UPK1A-201ENST00000222275 CALD1Q05682 793 aaKnown RBP17.84■□□□□ 0.45
UPK1A-201ENST00000222275 NBPF26B4DH59 902 aa17.83■□□□□ 0.44
UPK1A-201ENST00000222275 TAF7Q15545 349 aaPredicted RBP17.83■□□□□ 0.44
UPK1A-201ENST00000222275 NEUROD2Q15784 382 aa17.83■□□□□ 0.44
UPK1A-201ENST00000222275 NBPF10Q6P3W6 841 aaKnown RBP17.83■□□□□ 0.44
UPK1A-201ENST00000222275 NBPF15Q8N660 670 aa17.83■□□□□ 0.44
UPK1A-201ENST00000222275 DLG5Q8TDM6 1919 aa17.82■□□□□ 0.44
UPK1A-201ENST00000222275 KIF13BQ9NQT8 1826 aa17.82■□□□□ 0.44
UPK1A-201ENST00000222275 N4BP2Q86UW6 1770 aaPredicted RBP17.82■□□□□ 0.44
UPK1A-201ENST00000222275 CCDC27Q2M243 656 aa17.82■□□□□ 0.44
UPK1A-201ENST00000222275 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
UPK1A-201ENST00000222275 TEX13AQ9BXU3 409 aaPredicted RBP17.82■□□□□ 0.44
UPK1A-201ENST00000222275 CEP350Q5VT06 3117 aa17.81■□□□□ 0.44
UPK1A-201ENST00000222275 BICDL1Q6ZP65 573 aa17.81■□□□□ 0.44
UPK1A-201ENST00000222275 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
UPK1A-201ENST00000222275 CAMTA2O94983 1202 aa17.8■□□□□ 0.44
UPK1A-201ENST00000222275 SERPINB2P05120 415 aa17.8■□□□□ 0.44
UPK1A-201ENST00000222275 IL6STP40189 918 aaPredicted RBP17.8■□□□□ 0.44
UPK1A-201ENST00000222275 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
UPK1A-201ENST00000222275 RRP7AQ9Y3A4 280 aaKnown RBP17.8■□□□□ 0.44
UPK1A-201ENST00000222275 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
UPK1A-201ENST00000222275 SNRPA1P09661 255 aaKnown RBP17.79■□□□□ 0.44
UPK1A-201ENST00000222275 BABAM1Q9NWV8 329 aa17.79■□□□□ 0.44
UPK1A-201ENST00000222275 TRIM35Q9UPQ4 493 aa17.78■□□□□ 0.44
UPK1A-201ENST00000222275 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
UPK1A-201ENST00000222275 EIF4A1P60842 406 aaKnown RBP17.77■□□□□ 0.44
UPK1A-201ENST00000222275 A0A087WZG4 1122 aa17.76■□□□□ 0.43
UPK1A-201ENST00000222275 GIGYF1O75420 1035 aaPredicted RBP17.76■□□□□ 0.43
UPK1A-201ENST00000222275 ARHGAP27Q6ZUM4 889 aa17.76■□□□□ 0.43
UPK1A-201ENST00000222275 ADCY9O60503 1353 aa17.76■□□□□ 0.43
UPK1A-201ENST00000222275 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
UPK1A-201ENST00000222275 AFDNP55196 1824 aaKnown RBP17.75■□□□□ 0.43
UPK1A-201ENST00000222275 ATP10DQ9P241 1426 aa17.74■□□□□ 0.43
UPK1A-201ENST00000222275 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
UPK1A-201ENST00000222275 WDR63Q8IWG1 891 aa17.74■□□□□ 0.43
UPK1A-201ENST00000222275 PRELPP51888 382 aa17.73■□□□□ 0.43
UPK1A-201ENST00000222275 HLFQ16534 295 aa17.73■□□□□ 0.43
UPK1A-201ENST00000222275 DALRD3Q5D0E6 543 aaKnown RBP17.73■□□□□ 0.43
UPK1A-201ENST00000222275 PRR5LQ6MZQ0 368 aa17.73■□□□□ 0.43
UPK1A-201ENST00000222275 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
UPK1A-201ENST00000222275 IL16Q14005 1332 aa17.72■□□□□ 0.43
UPK1A-201ENST00000222275 GNAI1P63096 354 aa17.72■□□□□ 0.43
UPK1A-201ENST00000222275 ZNF526Q8TF50 670 aaPredicted RBP17.72■□□□□ 0.43
UPK1A-201ENST00000222275 CFAP44Q96MT7 982 aa17.72■□□□□ 0.43
UPK1A-201ENST00000222275 BRCA1P38398 1863 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms