RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 RHOXF2Q9BQY4 288 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
USP31-201ENST00000219689 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
USP31-201ENST00000219689 ELF2Q15723 593 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.78□□□□□ -0.36
USP31-201ENST00000219689 NOL7Q9UMY1 257 aaKnown RBP12.78□□□□□ -0.36
USP31-201ENST00000219689 BLOC1S2Q6QNY1 142 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 NAA15Q9BXJ9 866 aaKnown RBP12.78□□□□□ -0.36
USP31-201ENST00000219689 TSC1Q92574 1164 aa12.77□□□□□ -0.36
USP31-201ENST00000219689 ZSCAN31Q96LW9 406 aaPredicted RBP12.77□□□□□ -0.36
USP31-201ENST00000219689 ATP11AP98196 1134 aa12.77□□□□□ -0.36
USP31-201ENST00000219689 TCHPQ9BT92 498 aa12.77□□□□□ -0.37
USP31-201ENST00000219689 TPX2Q9ULW0 747 aaKnown RBP12.77□□□□□ -0.37
USP31-201ENST00000219689 FSIP1Q8NA03 581 aa12.77□□□□□ -0.37
USP31-201ENST00000219689 GNAI2P04899 355 aa12.77□□□□□ -0.37
USP31-201ENST00000219689 HDGFP51858 240 aaKnown RBP12.77□□□□□ -0.37
USP31-201ENST00000219689 GNAI1P63096 354 aa12.76□□□□□ -0.37
USP31-201ENST00000219689 ZSCAN26Q16670 478 aa12.76□□□□□ -0.37
USP31-201ENST00000219689 PUF60Q9UHX1 559 aaKnown RBP12.76□□□□□ -0.37
USP31-201ENST00000219689 EXOSC9Q06265 439 aaKnown RBP12.76□□□□□ -0.37
USP31-201ENST00000219689 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
USP31-201ENST00000219689 CNPY4Q8N129 248 aa12.76□□□□□ -0.37
USP31-201ENST00000219689 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
USP31-201ENST00000219689 KIF3CO14782 793 aa12.76□□□□□ -0.37
USP31-201ENST00000219689 CCDC50Q8IVM0 306 aa12.76□□□□□ -0.37
USP31-201ENST00000219689 ALS2CR12Q96Q35 445 aa12.76□□□□□ -0.37
USP31-201ENST00000219689 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.37
USP31-201ENST00000219689 CAPZA3Q96KX2 299 aa12.76□□□□□ -0.37
USP31-201ENST00000219689 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
USP31-201ENST00000219689 LACTBP83111 547 aaPredicted RBP12.76□□□□□ -0.37
USP31-201ENST00000219689 CEP128Q6ZU80 1094 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
USP31-201ENST00000219689 CKAP4Q07065 602 aaKnown RBP12.75□□□□□ -0.37
USP31-201ENST00000219689 NINQ8N4C6 2090 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 RBBP5Q15291 538 aaKnown RBP12.75□□□□□ -0.37
USP31-201ENST00000219689 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 USP48Q86UV5 1035 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 GBP1P32455 592 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 MXRA7P84157 204 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 CPLX4Q7Z7G2 160 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 SELENOSQ9BQE4 189 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 FAM114A2Q9NRY5 505 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 FEZ2Q9UHY8 353 aaPredicted RBP12.75□□□□□ -0.37
USP31-201ENST00000219689 PAF1Q8N7H5 531 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 SCAND2PQ9GZW5 306 aaPredicted RBP12.75□□□□□ -0.37
USP31-201ENST00000219689 NKTRP30414 1462 aaKnown RBP12.75□□□□□ -0.37
USP31-201ENST00000219689 A0A1W2PRG0 241 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 OAS2P29728 719 aaKnown RBP12.75□□□□□ -0.37
USP31-201ENST00000219689 SYT10Q6XYQ8 523 aa12.75□□□□□ -0.37
USP31-201ENST00000219689 SMARCA5O60264 1052 aaPredicted RBP12.74□□□□□ -0.37
USP31-201ENST00000219689 USO1O60763 962 aaKnown RBP12.74□□□□□ -0.37
USP31-201ENST00000219689 LMNTD2Q8IXW0 634 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 CTNNBL1Q8WYA6 563 aaPredicted RBP12.74□□□□□ -0.37
USP31-201ENST00000219689 PPP2R1AP30153 589 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 TFIP11Q9UBB9 837 aaKnown RBP12.74□□□□□ -0.37
USP31-201ENST00000219689 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 CTAGE15A4D2H0 777 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 CTAGE8P0CG41 777 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 GUCY1B3Q02153 619 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 CTAGE6Q86UF2 777 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 CTAGE4Q8IX94 777 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 NEK11Q8NG66 645 aa12.74□□□□□ -0.37
USP31-201ENST00000219689 YEATS4O95619 227 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 DDX54Q8TDD1 881 aaKnown RBP12.73□□□□□ -0.37
USP31-201ENST00000219689 MRFAP1L1Q96HT8 127 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 TCP11L2Q8N4U5 519 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 PIBF1Q8WXW3 757 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 FHOD3Q2V2M9 1422 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 PLEKHH2Q8IVE3 1493 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 PIP4K2BP78356 416 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 DDX19AQ9NUU7 478 aaKnown RBP12.73□□□□□ -0.37
USP31-201ENST00000219689 TMCO4Q5TGY1 634 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 MX1P20591 662 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 TERF1P54274 439 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 UBASH3AP57075 661 aa12.73□□□□□ -0.37
USP31-201ENST00000219689 COG3Q96JB2 828 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 URB1O60287 2271 aaKnown RBP12.72□□□□□ -0.37
USP31-201ENST00000219689 UTP14CQ5TAP6 766 aaKnown RBP12.72□□□□□ -0.37
USP31-201ENST00000219689 STX6O43752 255 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 ATF7IPQ6VMQ6 1270 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 CEP120Q8N960 986 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 ERO1AQ96HE7 468 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 EVC2Q86UK5 1308 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 PPARDQ03181 441 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 TBC1D9Q6ZT07 1266 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 SYT1P21579 422 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 PPP2R3AQ06190 1150 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
USP31-201ENST00000219689 PRPF4BQ13523 1007 aaKnown RBP12.72□□□□□ -0.37
USP31-201ENST00000219689 PPP2R5AQ15172 486 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 DDX46Q7L014 1031 aaKnown RBP12.72□□□□□ -0.37
USP31-201ENST00000219689 PIK3R5Q8WYR1 880 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 RBSNQ9H1K0 784 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 EVCP57679 992 aa12.72□□□□□ -0.37
USP31-201ENST00000219689 CCDC155Q8N6L0 562 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms