RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
RIPK3-201ENST00000216274 RTL5Q5HYW3 569 aaPredicted RBP16.01■□□□□ 0.15
RIPK3-201ENST00000216274 ANKRD44Q8N8A2 993 aa16.01■□□□□ 0.15
RIPK3-201ENST00000216274 CHMP4AQ9BY43 222 aa16.01■□□□□ 0.15
RIPK3-201ENST00000216274 CEMIPQ8WUJ3 1361 aa16.01■□□□□ 0.15
RIPK3-201ENST00000216274 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
RIPK3-201ENST00000216274 NBR1Q14596 966 aa16■□□□□ 0.15
RIPK3-201ENST00000216274 ZCRB1Q8TBF4 217 aaKnown RBP16■□□□□ 0.15
RIPK3-201ENST00000216274 BMP2KLQ5H9B9 411 aa15.99■□□□□ 0.15
RIPK3-201ENST00000216274 AKAP4Q5JQC9 854 aa15.99■□□□□ 0.15
RIPK3-201ENST00000216274 DCTPP1Q9H773 170 aa15.99■□□□□ 0.15
RIPK3-201ENST00000216274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.99■□□□□ 0.15
RIPK3-201ENST00000216274 ATP10DQ9P241 1426 aa15.98■□□□□ 0.15
RIPK3-201ENST00000216274 CACNA1FO60840 1977 aa15.98■□□□□ 0.15
RIPK3-201ENST00000216274 NHSQ6T4R5 1651 aa15.98■□□□□ 0.15
RIPK3-201ENST00000216274 RGPD3A6NKT7 1758 aaPredicted RBP15.98■□□□□ 0.15
RIPK3-201ENST00000216274 RGPD4Q7Z3J3 1758 aa15.98■□□□□ 0.15
RIPK3-201ENST00000216274 BAG6P46379 1132 aa15.98■□□□□ 0.15
RIPK3-201ENST00000216274 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
RIPK3-201ENST00000216274 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
RIPK3-201ENST00000216274 TRIM37O94972 964 aa15.97■□□□□ 0.15
RIPK3-201ENST00000216274 CEP85Q6P2H3 762 aa15.97■□□□□ 0.15
RIPK3-201ENST00000216274 ZNF530Q6P9A1 599 aaPredicted RBP15.97■□□□□ 0.15
RIPK3-201ENST00000216274 G2E3Q7L622 706 aa15.97■□□□□ 0.15
RIPK3-201ENST00000216274 HMMRO75330 724 aa15.96■□□□□ 0.15
RIPK3-201ENST00000216274 HOXB7P09629 217 aa15.96■□□□□ 0.15
RIPK3-201ENST00000216274 PXDNLA1KZ92 1463 aa15.96■□□□□ 0.14
RIPK3-201ENST00000216274 EIF5BO60841 1220 aaKnown RBP15.96■□□□□ 0.14
RIPK3-201ENST00000216274 SLC4A3P48751 1232 aa15.96■□□□□ 0.14
RIPK3-201ENST00000216274 FLIIQ13045 1269 aa15.96■□□□□ 0.14
RIPK3-201ENST00000216274 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.14
RIPK3-201ENST00000216274 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
RIPK3-201ENST00000216274 MEIS3Q99687 375 aa15.95■□□□□ 0.14
RIPK3-201ENST00000216274 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
RIPK3-201ENST00000216274 KDM3BQ7LBC6 1761 aa15.94■□□□□ 0.14
RIPK3-201ENST00000216274 TEFQ10587 303 aa15.94■□□□□ 0.14
RIPK3-201ENST00000216274 SLC4A10Q6U841 1118 aa15.94■□□□□ 0.14
RIPK3-201ENST00000216274 C22orf23Q9BZE7 217 aa15.94■□□□□ 0.14
RIPK3-201ENST00000216274 GNAI3P08754 354 aa15.94■□□□□ 0.14
RIPK3-201ENST00000216274 MFAP1P55081 439 aaKnown RBP15.94■□□□□ 0.14
RIPK3-201ENST00000216274 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
RIPK3-201ENST00000216274 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
RIPK3-201ENST00000216274 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
RIPK3-201ENST00000216274 N4BP2Q86UW6 1770 aaPredicted RBP15.93■□□□□ 0.14
RIPK3-201ENST00000216274 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
RIPK3-201ENST00000216274 F6X3S4 739 aa15.92■□□□□ 0.14
RIPK3-201ENST00000216274 GNAI2P04899 355 aa15.92■□□□□ 0.14
RIPK3-201ENST00000216274 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
RIPK3-201ENST00000216274 DEFB132Q7Z7B7 95 aa15.92■□□□□ 0.14
RIPK3-201ENST00000216274 DOT1LQ8TEK3 1739 aa15.92■□□□□ 0.14
RIPK3-201ENST00000216274 PLSCR1O15162 318 aa15.92■□□□□ 0.14
RIPK3-201ENST00000216274 RNMTO43148 476 aaKnown RBP15.92■□□□□ 0.14
RIPK3-201ENST00000216274 APBA3O96018 575 aa15.92■□□□□ 0.14
RIPK3-201ENST00000216274 LGR6Q9HBX8 967 aa15.92■□□□□ 0.14
RIPK3-201ENST00000216274 NKX1-1Q15270 411 aaPredicted RBP15.91■□□□□ 0.14
RIPK3-201ENST00000216274 RREB1Q92766 1687 aa15.91■□□□□ 0.14
RIPK3-201ENST00000216274 CYP27B1O15528 508 aa15.9■□□□□ 0.14
RIPK3-201ENST00000216274 BTAF1O14981 1849 aa15.9■□□□□ 0.14
RIPK3-201ENST00000216274 BTBD11A6QL63 1104 aa15.9■□□□□ 0.14
RIPK3-201ENST00000216274 NECTIN2Q92692 538 aa15.9■□□□□ 0.14
RIPK3-201ENST00000216274 CAMKK2Q96RR4 588 aa15.9■□□□□ 0.14
RIPK3-201ENST00000216274 EN1Q05925 392 aaPredicted RBP15.89■□□□□ 0.13
RIPK3-201ENST00000216274 PLEKHM2Q8IWE5 1019 aa15.89■□□□□ 0.13
RIPK3-201ENST00000216274 IFNL2Q8IZJ0 200 aa15.89■□□□□ 0.13
RIPK3-201ENST00000216274 CDC45O75419 566 aa15.88■□□□□ 0.13
RIPK3-201ENST00000216274 RBM25P49756 843 aaKnown RBP15.88■□□□□ 0.13
RIPK3-201ENST00000216274 MPRIPQ6WCQ1 1025 aa15.88■□□□□ 0.13
RIPK3-201ENST00000216274 KCNQ2O43526 872 aa15.87■□□□□ 0.13
RIPK3-201ENST00000216274 HSP90AB1P08238 724 aaKnown RBP15.87■□□□□ 0.13
RIPK3-201ENST00000216274 PHKG2P15735 406 aa15.87■□□□□ 0.13
RIPK3-201ENST00000216274 TTC22Q5TAA0 569 aa15.87■□□□□ 0.13
RIPK3-201ENST00000216274 ACSBG1Q96GR2 724 aa15.87■□□□□ 0.13
RIPK3-201ENST00000216274 TOGARAM1Q9Y4F4 1720 aa15.87■□□□□ 0.13
RIPK3-201ENST00000216274 ADAMTS7Q9UKP4 1686 aa15.87■□□□□ 0.13
RIPK3-201ENST00000216274 ITGB4P16144 1822 aa15.86■□□□□ 0.13
RIPK3-201ENST00000216274 NUP188Q5SRE5 1749 aa15.86■□□□□ 0.13
RIPK3-201ENST00000216274 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
RIPK3-201ENST00000216274 EZH2Q15910 746 aaKnown RBP15.86■□□□□ 0.13
RIPK3-201ENST00000216274 PTF1AQ7RTS3 328 aa15.86■□□□□ 0.13
RIPK3-201ENST00000216274 ATP8B2P98198 1209 aa15.85■□□□□ 0.13
RIPK3-201ENST00000216274 TBC1D9Q6ZT07 1266 aa15.85■□□□□ 0.13
RIPK3-201ENST00000216274 TBC1D2Q9BYX2 928 aa15.85■□□□□ 0.13
RIPK3-201ENST00000216274 PRIM1P49642 420 aaKnown RBP15.84■□□□□ 0.13
RIPK3-201ENST00000216274 SIPA1L3O60292 1781 aaPredicted RBP15.84■□□□□ 0.13
RIPK3-201ENST00000216274 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
RIPK3-201ENST00000216274 GSPT1P15170 499 aaKnown RBP15.84■□□□□ 0.13
RIPK3-201ENST00000216274 SRCIN1Q9C0H9 1055 aa15.84■□□□□ 0.13
RIPK3-201ENST00000216274 KCNQ3O43525 872 aa15.83■□□□□ 0.12
RIPK3-201ENST00000216274 NFKBIBQ15653 356 aa15.83■□□□□ 0.12
RIPK3-201ENST00000216274 DCAF5Q96JK2 942 aa15.83■□□□□ 0.12
RIPK3-201ENST00000216274 PHAXQ9H814 394 aaKnown RBP15.83■□□□□ 0.12
RIPK3-201ENST00000216274 CHPF2Q9P2E5 772 aa15.83■□□□□ 0.12
RIPK3-201ENST00000216274 DBF4Q9UBU7 674 aaPredicted RBP15.83■□□□□ 0.12
RIPK3-201ENST00000216274 LY75O60449 1722 aa15.83■□□□□ 0.12
RIPK3-201ENST00000216274 HEG1Q9ULI3 1381 aa15.83■□□□□ 0.12
RIPK3-201ENST00000216274 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
RIPK3-201ENST00000216274 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
RIPK3-201ENST00000216274 C16orf71Q8IYS4 520 aaPredicted RBP15.82■□□□□ 0.12
RIPK3-201ENST00000216274 DNAAF4Q8WXU2 420 aa15.82■□□□□ 0.12
RIPK3-201ENST00000216274 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms