RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 ZPR1O75312 459 aa26.62■■□□□ 1.85
SYNGR1-201ENST00000216155 AFDNP55196 1824 aaKnown RBP26.62■■□□□ 1.85
SYNGR1-201ENST00000216155 NRXN2Q9P2S2 1712 aa26.62■■□□□ 1.85
SYNGR1-201ENST00000216155 CHRNA5P30532 468 aa26.6■■□□□ 1.85
SYNGR1-201ENST00000216155 DALRD3Q5D0E6 543 aaKnown RBP26.59■■□□□ 1.85
SYNGR1-201ENST00000216155 VSIG10Q8N0Z9 540 aa26.59■■□□□ 1.85
SYNGR1-201ENST00000216155 NARFQ9UHQ1 456 aa26.59■■□□□ 1.85
SYNGR1-201ENST00000216155 SIPA1L3O60292 1781 aaPredicted RBP26.58■■□□□ 1.85
SYNGR1-201ENST00000216155 CNGB1Q14028 1251 aaPredicted RBP26.57■■□□□ 1.84
SYNGR1-201ENST00000216155 NFIXQ14938 502 aa26.57■■□□□ 1.84
SYNGR1-201ENST00000216155 C9orf131Q5VYM1 1079 aa26.57■■□□□ 1.84
SYNGR1-201ENST00000216155 DLEC1Q9Y238 1755 aa26.56■■□□□ 1.84
SYNGR1-201ENST00000216155 BCL2L12Q9HB09 334 aa26.56■■□□□ 1.84
SYNGR1-201ENST00000216155 U2SURPO15042 1029 aaKnown RBP26.55■■□□□ 1.84
SYNGR1-201ENST00000216155 NMRK2Q9NPI5 230 aa26.55■■□□□ 1.84
SYNGR1-201ENST00000216155 TTC5Q8N0Z6 440 aa26.54■■□□□ 1.84
SYNGR1-201ENST00000216155 SCN7AQ01118 1682 aa26.54■■□□□ 1.84
SYNGR1-201ENST00000216155 IL17REQ8NFR9 667 aa26.53■■□□□ 1.84
SYNGR1-201ENST00000216155 GAS2L2Q8NHY3 880 aa26.53■■□□□ 1.84
SYNGR1-201ENST00000216155 SBF1O95248 1867 aa26.53■■□□□ 1.84
SYNGR1-201ENST00000216155 TOMM70O94826 608 aa26.52■■□□□ 1.84
SYNGR1-201ENST00000216155 CANXP27824 592 aaKnown RBP26.52■■□□□ 1.84
SYNGR1-201ENST00000216155 CARMIL3Q8ND23 1372 aa26.51■■□□□ 1.83
SYNGR1-201ENST00000216155 GNAT3A8MTJ3 354 aa26.51■■□□□ 1.83
SYNGR1-201ENST00000216155 ZNF496Q96IT1 587 aaPredicted RBP26.51■■□□□ 1.83
SYNGR1-201ENST00000216155 HEG1Q9ULI3 1381 aa26.5■■□□□ 1.83
SYNGR1-201ENST00000216155 EIF5P55010 431 aaKnown RBP26.5■■□□□ 1.83
SYNGR1-201ENST00000216155 RNF181Q9P0P0 153 aa26.5■■□□□ 1.83
SYNGR1-201ENST00000216155 STARD3NLO95772 234 aa26.49■■□□□ 1.83
SYNGR1-201ENST00000216155 SERPINB2P05120 415 aa26.49■■□□□ 1.83
SYNGR1-201ENST00000216155 TEFQ10587 303 aa26.49■■□□□ 1.83
SYNGR1-201ENST00000216155 ZNF790Q6PG37 636 aa26.49■■□□□ 1.83
SYNGR1-201ENST00000216155 CEMIPQ8WUJ3 1361 aa26.48■■□□□ 1.83
SYNGR1-201ENST00000216155 TNRC6CQ9HCJ0 1690 aaKnown RBP26.47■■□□□ 1.83
SYNGR1-201ENST00000216155 ANKRD31Q8N7Z5 1873 aa26.45■■□□□ 1.83
SYNGR1-201ENST00000216155 APLP1P51693 650 aa26.45■■□□□ 1.82
SYNGR1-201ENST00000216155 RASSF7Q02833 373 aa26.45■■□□□ 1.82
SYNGR1-201ENST00000216155 RSPH6AQ9H0K4 717 aa26.45■■□□□ 1.82
SYNGR1-201ENST00000216155 A0A087WZG4 1122 aa26.44■■□□□ 1.82
SYNGR1-201ENST00000216155 PRKAR2BP31323 418 aa26.44■■□□□ 1.82
SYNGR1-201ENST00000216155 BICDL1Q6ZP65 573 aa26.44■■□□□ 1.82
SYNGR1-201ENST00000216155 PHACTR3Q96KR7 559 aa26.44■■□□□ 1.82
SYNGR1-201ENST00000216155 KDM2BQ8NHM5 1336 aa26.43■■□□□ 1.82
SYNGR1-201ENST00000216155 TBC1D9BQ66K14 1250 aa26.43■■□□□ 1.82
SYNGR1-201ENST00000216155 RBM46Q8TBY0 533 aaKnown RBP26.43■■□□□ 1.82
SYNGR1-201ENST00000216155 COL11A2P13942 1736 aaPredicted RBP26.42■■□□□ 1.82
SYNGR1-201ENST00000216155 C2CD5Q86YS7 1000 aa26.42■■□□□ 1.82
SYNGR1-201ENST00000216155 FMNL2Q96PY5 1086 aa26.42■■□□□ 1.82
SYNGR1-201ENST00000216155 TEX13AQ9BXU3 409 aaPredicted RBP26.42■■□□□ 1.82
SYNGR1-201ENST00000216155 BCORQ6W2J9 1755 aa26.42■■□□□ 1.82
SYNGR1-201ENST00000216155 WDR90Q96KV7 1748 aa26.42■■□□□ 1.82
SYNGR1-201ENST00000216155 TTLL6Q8N841 843 aa26.41■■□□□ 1.82
SYNGR1-201ENST00000216155 CFAP53Q96M91 514 aa26.41■■□□□ 1.82
SYNGR1-201ENST00000216155 ZNF330Q9Y3S2 320 aaPredicted RBP26.41■■□□□ 1.82
SYNGR1-201ENST00000216155 TIAM2Q8IVF5 1701 aa26.41■■□□□ 1.82
SYNGR1-201ENST00000216155 KCNQ3O43525 872 aa26.4■■□□□ 1.82
SYNGR1-201ENST00000216155 IL6STP40189 918 aaPredicted RBP26.4■■□□□ 1.82
SYNGR1-201ENST00000216155 PRELPP51888 382 aa26.4■■□□□ 1.82
SYNGR1-201ENST00000216155 C16orf71Q8IYS4 520 aaPredicted RBP26.4■■□□□ 1.82
SYNGR1-201ENST00000216155 ZC3H4Q9UPT8 1303 aaKnown RBP26.39■■□□□ 1.82
SYNGR1-201ENST00000216155 IFFO2Q5TF58 517 aa26.39■■□□□ 1.82
SYNGR1-201ENST00000216155 TBC1D2BQ9UPU7 963 aa26.39■■□□□ 1.82
SYNGR1-201ENST00000216155 BTBD11A6QL63 1104 aa26.38■■□□□ 1.81
SYNGR1-201ENST00000216155 H0YIN7 160 aa26.38■■□□□ 1.81
SYNGR1-201ENST00000216155 A1BGP04217 495 aa26.38■■□□□ 1.81
SYNGR1-201ENST00000216155 LMNB1P20700 586 aa26.37■■□□□ 1.81
SYNGR1-201ENST00000216155 RRAGCQ9HB90 399 aa26.37■■□□□ 1.81
SYNGR1-201ENST00000216155 PRR5LQ6MZQ0 368 aa26.36■■□□□ 1.81
SYNGR1-201ENST00000216155 DNAJC5GQ8N7S2 189 aa26.36■■□□□ 1.81
SYNGR1-201ENST00000216155 CCDC88AQ3V6T2 1871 aa26.36■■□□□ 1.81
SYNGR1-201ENST00000216155 NFKBIEO00221 500 aa26.35■■□□□ 1.81
SYNGR1-201ENST00000216155 CAMTA2O94983 1202 aa26.35■■□□□ 1.81
SYNGR1-201ENST00000216155 PPP2R1AP30153 589 aa26.35■■□□□ 1.81
SYNGR1-201ENST00000216155 NUDCQ9Y266 331 aa26.35■■□□□ 1.81
SYNGR1-201ENST00000216155 FSTL1Q12841 308 aa26.34■■□□□ 1.81
SYNGR1-201ENST00000216155 CCDC24Q8N4L8 307 aa26.34■■□□□ 1.81
SYNGR1-201ENST00000216155 BRIP1Q9BX63 1249 aa26.34■■□□□ 1.81
SYNGR1-201ENST00000216155 U2AF1L5P0DN76 240 aaPredicted RBP26.33■■□□□ 1.81
SYNGR1-201ENST00000216155 U2AF1Q01081 240 aaKnown RBP eCLIP26.33■■□□□ 1.81
SYNGR1-201ENST00000216155 PRAMEF22A3QJZ6 481 aa26.32■■□□□ 1.8
SYNGR1-201ENST00000216155 PDE6BP35913 854 aa26.32■■□□□ 1.8
SYNGR1-201ENST00000216155 FER1L6Q2WGJ9 1857 aa26.32■■□□□ 1.8
SYNGR1-201ENST00000216155 PIP4K2AP48426 406 aaPredicted RBP26.31■■□□□ 1.8
SYNGR1-201ENST00000216155 MCM10Q7L590 875 aa26.31■■□□□ 1.8
SYNGR1-201ENST00000216155 NPM2Q86SE8 214 aaKnown RBP26.31■■□□□ 1.8
SYNGR1-201ENST00000216155 DZIP3Q86Y13 1208 aaKnown RBP26.31■■□□□ 1.8
SYNGR1-201ENST00000216155 ZNF622Q969S3 477 aaKnown RBP eCLIP26.31■■□□□ 1.8
SYNGR1-201ENST00000216155 PDZRN3Q9UPQ7 1066 aa26.31■■□□□ 1.8
SYNGR1-201ENST00000216155 USP16Q9Y5T5 823 aa26.31■■□□□ 1.8
SYNGR1-201ENST00000216155 GLTPD2A6NH11 291 aa26.3■■□□□ 1.8
SYNGR1-201ENST00000216155 HTRA3P83110 453 aa26.3■■□□□ 1.8
SYNGR1-201ENST00000216155 CNBD1Q8NA66 436 aa26.3■■□□□ 1.8
SYNGR1-201ENST00000216155 SETDB2Q96T68 719 aa26.3■■□□□ 1.8
SYNGR1-201ENST00000216155 CACNA1SQ13698 1873 aa26.3■■□□□ 1.8
SYNGR1-201ENST00000216155 ARFGEF2Q9Y6D5 1785 aa26.29■■□□□ 1.8
SYNGR1-201ENST00000216155 RTF1Q92541 710 aaKnown RBP26.29■■□□□ 1.8
SYNGR1-201ENST00000216155 C21orf2O43822 256 aa26.27■■□□□ 1.8
SYNGR1-201ENST00000216155 DCTN1Q14203 1278 aa26.27■■□□□ 1.8
SYNGR1-201ENST00000216155 DICER1Q9UPY3 1922 aaKnown RBP26.27■■□□□ 1.8
SYNGR1-201ENST00000216155 SLX4Q8IY92 1834 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms