RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 ATP6V1AP38606 617 aa12.72□□□□□ -0.37
RTCB-201ENST00000216038 PROSER3Q2NL68 480 aa12.72□□□□□ -0.37
RTCB-201ENST00000216038 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
RTCB-201ENST00000216038 STK31Q9BXU1 1019 aa12.72□□□□□ -0.37
RTCB-201ENST00000216038 HOXB7P09629 217 aa12.72□□□□□ -0.37
RTCB-201ENST00000216038 MYL6BP14649 208 aa12.72□□□□□ -0.37
RTCB-201ENST00000216038 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
RTCB-201ENST00000216038 G2E3Q7L622 706 aa12.72□□□□□ -0.37
RTCB-201ENST00000216038 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
RTCB-201ENST00000216038 SMARCC1Q92922 1105 aaPredicted RBP12.72□□□□□ -0.37
RTCB-201ENST00000216038 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
RTCB-201ENST00000216038 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
RTCB-201ENST00000216038 TNNQ9UQP3 1299 aa12.72□□□□□ -0.37
RTCB-201ENST00000216038 A1BGP04217 495 aa12.71□□□□□ -0.37
RTCB-201ENST00000216038 PHAXQ9H814 394 aaKnown RBP12.71□□□□□ -0.37
RTCB-201ENST00000216038 ITPK1Q13572 414 aa12.71□□□□□ -0.38
RTCB-201ENST00000216038 C20orf194Q5TEA3 1177 aa12.71□□□□□ -0.38
RTCB-201ENST00000216038 CLUAP1Q96AJ1 413 aa12.71□□□□□ -0.38
RTCB-201ENST00000216038 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.38
RTCB-201ENST00000216038 LAMB4A4D0S4 1761 aa12.7□□□□□ -0.38
RTCB-201ENST00000216038 TJP1Q07157 1748 aa12.7□□□□□ -0.38
RTCB-201ENST00000216038 APBA3O96018 575 aa12.7□□□□□ -0.38
RTCB-201ENST00000216038 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
RTCB-201ENST00000216038 UBE2Q2Q8WVN8 375 aa12.7□□□□□ -0.38
RTCB-201ENST00000216038 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
RTCB-201ENST00000216038 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
RTCB-201ENST00000216038 CACNA1FO60840 1977 aa12.7□□□□□ -0.38
RTCB-201ENST00000216038 PDIA6Q15084 440 aa12.69□□□□□ -0.38
RTCB-201ENST00000216038 DBF4Q9UBU7 674 aaPredicted RBP12.69□□□□□ -0.38
RTCB-201ENST00000216038 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
RTCB-201ENST00000216038 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
RTCB-201ENST00000216038 RNF123Q5XPI4 1314 aa12.69□□□□□ -0.38
RTCB-201ENST00000216038 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
RTCB-201ENST00000216038 LY75O60449 1722 aa12.68□□□□□ -0.38
RTCB-201ENST00000216038 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
RTCB-201ENST00000216038 STARD3NLO95772 234 aa12.68□□□□□ -0.38
RTCB-201ENST00000216038 CYP19A1P11511 503 aaPredicted RBP12.68□□□□□ -0.38
RTCB-201ENST00000216038 NBPF14Q5TI25 921 aa12.68□□□□□ -0.38
RTCB-201ENST00000216038 NBPF10Q6P3W6 841 aaKnown RBP12.68□□□□□ -0.38
RTCB-201ENST00000216038 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
RTCB-201ENST00000216038 KIF16BQ96L93 1317 aa12.67□□□□□ -0.38
RTCB-201ENST00000216038 TRIM27P14373 513 aa12.67□□□□□ -0.38
RTCB-201ENST00000216038 FLIIQ13045 1269 aa12.67□□□□□ -0.38
RTCB-201ENST00000216038 LINC00116Q8NCU8 138 aa12.67□□□□□ -0.38
RTCB-201ENST00000216038 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
RTCB-201ENST00000216038 TEX13AQ9BXU3 409 aaPredicted RBP12.67□□□□□ -0.38
RTCB-201ENST00000216038 DDX21Q9NR30 783 aaKnown RBP eCLIP12.67□□□□□ -0.38
RTCB-201ENST00000216038 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
RTCB-201ENST00000216038 RLBP1P12271 317 aa12.67□□□□□ -0.38
RTCB-201ENST00000216038 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
RTCB-201ENST00000216038 FKBP5Q13451 457 aaPredicted RBP12.67□□□□□ -0.38
RTCB-201ENST00000216038 ZKSCAN2Q63HK3 967 aa12.67□□□□□ -0.38
RTCB-201ENST00000216038 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.67□□□□□ -0.38
RTCB-201ENST00000216038 ZBTB1Q9Y2K1 713 aa12.67□□□□□ -0.38
RTCB-201ENST00000216038 TNS1Q9HBL0 1735 aaKnown RBP12.67□□□□□ -0.38
RTCB-201ENST00000216038 F6X3S4 739 aa12.66□□□□□ -0.38
RTCB-201ENST00000216038 ATF7IPQ6VMQ6 1270 aa12.66□□□□□ -0.38
RTCB-201ENST00000216038 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
RTCB-201ENST00000216038 ARXQ96QS3 562 aa12.66□□□□□ -0.38
RTCB-201ENST00000216038 BRPF1P55201 1214 aaPredicted RBP12.66□□□□□ -0.38
RTCB-201ENST00000216038 PROM2Q8N271 834 aa12.66□□□□□ -0.38
RTCB-201ENST00000216038 CHMP4AQ9BY43 222 aa12.66□□□□□ -0.38
RTCB-201ENST00000216038 HYPKQ9NX55 129 aa12.66□□□□□ -0.38
RTCB-201ENST00000216038 TAF1LQ8IZX4 1826 aa12.66□□□□□ -0.38
RTCB-201ENST00000216038 COL5A3P25940 1745 aaPredicted RBP12.65□□□□□ -0.38
RTCB-201ENST00000216038 IPO8O15397 1037 aaKnown RBP12.65□□□□□ -0.38
RTCB-201ENST00000216038 COPS6Q7L5N1 327 aa12.65□□□□□ -0.38
RTCB-201ENST00000216038 LRP10Q7Z4F1 713 aa12.65□□□□□ -0.38
RTCB-201ENST00000216038 FTSJ3Q8IY81 847 aaKnown RBP12.65□□□□□ -0.38
RTCB-201ENST00000216038 XAGE3Q8WTP9 111 aa12.65□□□□□ -0.38
RTCB-201ENST00000216038 TXNRD1Q16881 649 aa12.64□□□□□ -0.39
RTCB-201ENST00000216038 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
RTCB-201ENST00000216038 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
RTCB-201ENST00000216038 CCDC87Q9NVE4 849 aa12.64□□□□□ -0.39
RTCB-201ENST00000216038 EN1Q05925 392 aaPredicted RBP12.64□□□□□ -0.39
RTCB-201ENST00000216038 DZIP1LQ8IYY4 767 aaKnown RBP12.64□□□□□ -0.39
RTCB-201ENST00000216038 COG6Q9Y2V7 657 aa12.64□□□□□ -0.39
RTCB-201ENST00000216038 ZNF831Q5JPB2 1677 aa12.63□□□□□ -0.39
RTCB-201ENST00000216038 PI4KAP2A4QPH2 592 aa12.63□□□□□ -0.39
RTCB-201ENST00000216038 TTLL7Q6ZT98 887 aa12.63□□□□□ -0.39
RTCB-201ENST00000216038 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
RTCB-201ENST00000216038 PI4KAP1Q8N8J0 262 aa12.63□□□□□ -0.39
RTCB-201ENST00000216038 PTPRCP08575 1304 aa12.63□□□□□ -0.39
RTCB-201ENST00000216038 PLSCR1O15162 318 aa12.62□□□□□ -0.39
RTCB-201ENST00000216038 ARHGAP45Q92619 1136 aa12.62□□□□□ -0.39
RTCB-201ENST00000216038 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
RTCB-201ENST00000216038 CICQ96RK0 1608 aaPredicted RBP12.62□□□□□ -0.39
RTCB-201ENST00000216038 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
RTCB-201ENST00000216038 SF3B2Q13435 895 aaKnown RBP12.62□□□□□ -0.39
RTCB-201ENST00000216038 EZH2Q15910 746 aaKnown RBP12.62□□□□□ -0.39
RTCB-201ENST00000216038 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
RTCB-201ENST00000216038 TMEM57Q8N5G2 664 aa12.62□□□□□ -0.39
RTCB-201ENST00000216038 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
RTCB-201ENST00000216038 GNPATO15228 680 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 ITPRIPQ8IWB1 547 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 EXOC6Q8TAG9 804 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 API5Q9BZZ5 524 aaKnown RBP12.61□□□□□ -0.39
RTCB-201ENST00000216038 TBC1D2BQ9UPU7 963 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 MAP3K2Q9Y2U5 619 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 ADCY9O60503 1353 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms